PDB: 18662 resultsInfo pagesStatus searchChemie searchBIRD

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6OA8	Superfolder Green Fluorescent Protein with 4-cyano-L-phenylalanine at the chromophore (position 66) Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, SODIUM ION, ... Authors: Piacentini, J, Olenginski, G.M, Brewer, S.H, Phillips-Piro, C.M. Deposit date: 2019-03-15 Release date: 2020-08-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.37 Å) Cite: Structural and spectrophotometric investigation of two unnatural amino-acid altered chromophores in the superfolder green fluorescent protein Acta Crystallogr.,Sect.D, 2021
6OLZ	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Li, W, Cate, J.H.D. Deposit date: 2019-04-17 Release date: 2019-06-19 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
6OM7	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Li, W, Cate, J.H.D. Deposit date: 2019-04-18 Release date: 2019-06-19 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
1U1V	Structure and function of phenazine-biosynthesis protein PhzF from Pseudomonas fluorescens 2-79 Descriptor: GLYCEROL, Phenazine biosynthesis protein phzF, SULFATE ION Authors: Blankenfeldt, W, Kuzin, A.P, Skarina, T, Korniyenko, Y, Tong, L, Bayer, P, Janning, P, Thomashow, L.S, Mavrodi, D.V. Deposit date: 2004-07-16 Release date: 2004-11-02 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens. Proc.Natl.Acad.Sci.USA, 101, 2004
6OLG	Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Li, W, Cate, J.H.D. Deposit date: 2019-04-16 Release date: 2019-06-19 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
6OLF	Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Li, W, Cate, J.H.D. Deposit date: 2019-04-16 Release date: 2019-06-19 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
8BIP	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Knorr, A.G, Mackens-Kiani, T, Musial, J, Berninghausen, O, Becker, T, Beatrix, B, Beckmann, R. Deposit date: 2022-11-02 Release date: 2023-02-08 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: The dynamic architecture of Map1- and NatB-ribosome complexes coordinates the sequential modifications of nascent polypeptide chains. Plos Biol., 21, 2023
8UB6	Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA H62X, containing 3-methylhistidine at position 62 Descriptor: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS Authors: Henderson, J.N, Mills, J.H. Deposit date: 2023-09-22 Release date: 2023-11-29 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Capturing excited-state structural snapshots of evolutionary green-to-red photochromic fluorescent proteins. Front Chem, 11, 2023
6OM0	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Li, W, Cate, J.H.D. Deposit date: 2019-04-17 Release date: 2019-06-19 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
6OLE	Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Li, W, Cate, J.H.D. Deposit date: 2019-04-16 Release date: 2019-06-19 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
3V3D	Crystal Structure of an eYFP single mutant Descriptor: SULFATE ION, Yellow fluorescent protein Authors: Ngan, N.B, Van Hecke, K, Van Meervelt, L. Deposit date: 2011-12-13 Release date: 2012-12-26 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Improving the second-order nonlinear optical response of fluorescent proteins: the symmetry argument. J.Am.Chem.Soc., 135, 2013
6DEJ	The structure of HcRed7, a brighter and red-shifted HcRed variant Descriptor: CHLORIDE ION, DODECAETHYLENE GLYCOL, GFP-like non-fluorescent chromoprotein, ... Authors: Wannier, T.M, Mayo, S.L. Deposit date: 2018-05-12 Release date: 2018-05-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6279 Å) Cite: Monomerization of far-red fluorescent proteins. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5Y6K	Human serum trnasferrin bound to a fluorescent probe Descriptor: (2S)-6-[2-(7-azido-4-methyl-2-oxidanylidene-chromen-3-yl)ethanoylamino]-2-[bis(2-hydroxy-2-oxoethyl)amino]hexanoic acid, FE (III) ION, MALONATE ION, ... Authors: Jiang, N, Cheng, T, Wang, M, Chan, G.C.F, Jin, L, Li, H, Sun, H. Deposit date: 2017-08-12 Release date: 2018-01-24 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.86 Å) Cite: Tracking iron-associated proteomes in pathogens by a fluorescence approach. Metallomics, 10, 2018
4B30	Structure of the mutant V44A of the fluorescent protein KillerRed Descriptor: CHLORIDE ION, GLYCEROL, KILLERRED, ... Authors: Carpentier, P, de Rosny, E. Deposit date: 2012-07-19 Release date: 2013-01-16 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Gfp-Like Phototransformation Mechanisms in the Cytotoxic Fluorescent Protein Killerred Unraveled by Structural and Spectroscopic Investigations. J.Am.Chem.Soc., 134, 2012
1EMC	GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT Descriptor: GREEN FLUORESCENT PROTEIN Authors: Palm, G, Zdanov, A, Wlodawer, A. Deposit date: 1997-03-31 Release date: 1997-08-20 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The structural basis for spectral variations in green fluorescent protein. Nat.Struct.Biol., 4, 1997
9C74	superfolder Green Fluorescent Protein with meta-nitro-tyrosine incorporated at position 66 Descriptor: Green fluorescent protein, SODIUM ION Authors: Phillips-Piro, C.M, Broughton, D.P. Deposit date: 2024-06-10 Release date: 2024-10-16 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Modulating the pH Dependent Photophysical Properties of Green Fluorescent Protein Rsc Adv, 2024
1EMK	GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT Descriptor: GREEN FLUORESCENT PROTEIN Authors: Palm, G, Zdanov, A, Wlodawer, A. Deposit date: 1997-03-31 Release date: 1997-08-20 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The structural basis for spectral variations in green fluorescent protein. Nat.Struct.Biol., 4, 1997
8SXC	Crystal Structure of Fluorescent Protein Fusion Red 2 Descriptor: Far-red Fluorescent Protein Fusion Red 2, GLYCEROL, HEXAETHYLENE GLYCOL, ... Authors: Pletnev, S, Pletneva, N, Pletnev, V. Deposit date: 2023-05-21 Release date: 2024-02-07 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal Structure of Fluorescent Protein Fusion Red 2 To Be Published
8A6R	Room temperature rsEGFP2 with a chlorinated chromophore 100 ps after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6O	Room temperature rsEGFP2 with a chlorinated chromophore 600 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6S	Room temperature rsEGFP2 with a chlorinated chromophore 1 microsecond after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-19 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6N	Room temperature rsEGFP2 with a chlorinated chromophore 300 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6P	Room temperature rsEGFP2 with a chlorinated chromophore 900 fs after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6Q	Room temperature rsEGFP2 with a chlorinated chromophore 5 ps after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A7V	Room temperature rsEGFP2 in its OFF-state obtained with SFX Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023

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