Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1SXR
DownloadVisualize
BU of 1sxr by Molmil
Drosophila Peptidoglycan Recognition Protein (PGRP)-SA
Descriptor: 1,2-ETHANEDIOL, Peptidoglycan recognition protein SA CG11709-PA, SULFATE ION
Authors:Reiser, J.B, Teyton, L, Wilson, I.A.
Deposit date:2004-03-31
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal structure of the Drosophila peptidoglycan recognition protein (PGRP)-SA at 1.56 A resolution
J.Mol.Biol., 340, 2004
1S2J
DownloadVisualize
BU of 1s2j by Molmil
Crystal structure of the Drosophila pattern-recognition receptor PGRP-SA
Descriptor: PHOSPHATE ION, Peptidoglycan recognition protein SA CG11709-PA
Authors:Chang, C.-I, Pili-Floury, S, Chelliah, Y, Lemaitre, B, Mengin-Lecreulx, D, Deisenhofer, J.
Deposit date:2004-01-08
Release date:2004-09-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Drosophila pattern recognition receptor contains a peptidoglycan docking groove and unusual l,d-carboxypeptidase activity.
PLOS BIOL., 2, 2004
1TWQ
DownloadVisualize
BU of 1twq by Molmil
Crystal structure of the C-terminal PGN-binding domain of human PGRP-Ialpha in complex with PGN analog muramyl tripeptide
Descriptor: N-acetyl-beta-muramic acid, NICKEL (II) ION, muramyl tripeptide, ...
Authors:Guan, R, Roychowdury, A, Boons, G.-A, Mariuzza, R.A.
Deposit date:2004-07-01
Release date:2004-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for peptidoglycan binding by peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.USA, 101, 2004
1SK3
DownloadVisualize
BU of 1sk3 by Molmil
Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha
Descriptor: NICKEL (II) ION, Peptidoglycan recognition protein I-alpha, SULFATE ION
Authors:Guan, R, Malchiodi, E.L, Qian, W, Schuck, P, Mariuzza, R.A.
Deposit date:2004-03-04
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha
J.Biol.Chem., 279, 2004
2BH7
DownloadVisualize
BU of 2bh7 by Molmil
Crystal structure of a SeMet derivative of AmiD at 2.2 angstroms
Descriptor: N-ACETYLMURAMOYL-L-ALANINE AMIDASE, SULFATE ION, ZINC ION
Authors:Petrella, S, Herman, R, Sauvage, E, Genereux, C, Pennartz, A, Joris, B, Charlier, P.
Deposit date:2005-01-07
Release date:2006-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-L-Alanine Amidase Amid from Escherichia Coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
3TRU
DownloadVisualize
BU of 3tru by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite chorismate at 3.2 A resolution
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-09-10
Release date:2011-09-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite chorismate at 3.2 A resolution
To be Published
3EP1
DownloadVisualize
BU of 3ep1 by Molmil
Structure of the PGRP-Hd from Alvinella pompejana
Descriptor: PGRP-Hd - Peptidoglycan recognition protein homologue
Authors:Delfosse, V, Gagniere, N, Perrodou, E, Poch, O, Lecompte, O, Mayer, C.
Deposit date:2008-09-29
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the PGRP-Hd from Alvinella pompejana
To be Published
3UIL
DownloadVisualize
BU of 3uil by Molmil
Crystal Structure of the complex of PGRP-S with lauric acid at 2.2 A resolution
Descriptor: GLYCEROL, LAURIC ACID, Peptidoglycan recognition protein 1
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-11-05
Release date:2012-07-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013
2CB3
DownloadVisualize
BU of 2cb3 by Molmil
Crystal structure of peptidoglycan recognition protein-LE in complex with tracheal cytotoxin (monomeric diaminopimelic acid-type peptidoglycan)
Descriptor: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, GLYCEROL, PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE
Authors:Lim, J.-H, Kim, M.-S, Oh, B.-H.
Deposit date:2005-12-29
Release date:2006-01-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Preferential Recognition of Diaminopimelic Acid-Type Peptidoglycan by a Subset of Peptidoglycan Recognition Proteins
J.Biol.Chem., 281, 2006
3COR
DownloadVisualize
BU of 3cor by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with N-acetylgalactosamine at 3.1 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, L(+)-TARTARIC ACID, Peptidoglycan recognition protein
Authors:Sharma, P, Vikram, G, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2008-03-29
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with N-acetylgalactosamine at 3.1 A resolution
To be Published
3T39
DownloadVisualize
BU of 3t39 by Molmil
Crystal structure of the complex of camel peptidoglycan recognition protein(CPGRP-S) with a mycobacterium metabolite shikimate at 2.7 A resolution
Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, GLYCEROL, Peptidoglycan recognition protein 1, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-07-25
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with a mycobacterium metabolite shikimate at 2.7 A resolution
To be Published
3D2Z
DownloadVisualize
BU of 3d2z by Molmil
Complex of the N-acetylmuramyl-L-alanine amidase AmiD from E.coli with the product L-Ala-D-gamma-Glu-L-Lys
Descriptor: CHLORIDE ION, L-Ala-D-gamma-Glu-L-Lys peptide, N-acetylmuramoyl-L-alanine amidase amiD, ...
Authors:Kerff, F, Petrella, S, Herman, R, Sauvage, E, Mercier, F, Luxen, A, Frere, J.M, Joris, B, Charlier, P.
Deposit date:2008-05-09
Release date:2009-06-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-l-Alanine Amidase AmiD from Escherichia coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
3T2V
DownloadVisualize
BU of 3t2v by Molmil
Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with mycolic acid at 2.5 A resolution
Descriptor: (2S,3R)-2-hexyl-3-hydroxynonanoic acid, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Sharma, P, Dube, D, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-07-23
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013
2EAV
DownloadVisualize
BU of 2eav by Molmil
Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ibeta
Descriptor: NICKEL (II) ION, Peptidoglycan recognition protein-I-beta
Authors:Cho, S, Mariuzza, R.A.
Deposit date:2007-02-03
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the bactericidal mechanism of human peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAX
DownloadVisualize
BU of 2eax by Molmil
Crystal structure of human PGRP-IBETAC in complex with glycosamyl muramyl pentapeptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside, GLYCOSAMYL MURAMYL PENTAPEPTIDE, Peptidoglycan recognition protein-I-beta
Authors:Cho, S.
Deposit date:2007-02-03
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the bactericidal mechanism of human peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
2APH
DownloadVisualize
BU of 2aph by Molmil
Crystal structure of human PGRP-IalphaC in complex with muramyl pentapeptide
Descriptor: N-acetyl-beta-muramic acid, Peptidoglycan recognition protein I-alpha, SULFATE ION, ...
Authors:Guan, R, Roychowdjury, A, Boons, G, Mariuzza, R.A.
Deposit date:2005-08-16
Release date:2006-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human peptidoglycan recognition protein I alpha bound to a muramyl pentapeptide from Gram-positive bacteria.
Protein Sci., 15, 2006
3USX
DownloadVisualize
BU of 3usx by Molmil
Crystal structure of PGRP-S complexed with Myristic Acid at 2.28 A resolution
Descriptor: GLYCEROL, MYRISTIC ACID, Peptidoglycan recognition protein 1
Authors:Yamini, S, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-11-24
Release date:2012-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013
3CXA
DownloadVisualize
BU of 3cxa by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with alpha-D-glucopyranosyl alpha-D-glucopyranoside at 3.4 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Balaji, K, Sharma, P, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2008-04-24
Release date:2008-05-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with alpha-D-glucopyranosyl alpha-D-glucopyranoside at 3.4 A resolution
To be Published
3D2Y
DownloadVisualize
BU of 3d2y by Molmil
Complex of the N-acetylmuramyl-L-alanine amidase AmiD from E.coli with the substrate anhydro-N-acetylmuramic acid-L-Ala-D-gamma-Glu-L-Lys
Descriptor: Anhydro-N-acetylmuramic acid-L-Ala-D-gamma-Glu-L-Lys, GLYCEROL, N-acetylmuramoyl-L-alanine amidase amiD
Authors:Kerff, F, Petrella, S, Herman, R, Sauvage, E, Mercier, F, Luxen, A, Frere, J.M, Joris, B, Charlier, P.
Deposit date:2008-05-09
Release date:2009-06-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-l-Alanine Amidase AmiD from Escherichia coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
3CG9
DownloadVisualize
BU of 3cg9 by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with methyloxane-2,3,4,5-tetrol at 2.9 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein, alpha-L-rhamnopyranose
Authors:Sharma, P, Kaur, A, Singh, N, Sharma, S, Bhushan, A, Pathak, K.M.L, Kaur, P, Singh, T.P.
Deposit date:2008-03-05
Release date:2008-04-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with methyoxane-2,3,4,5-tetrol at 2.9 A resolution
To be Published
2AR3
DownloadVisualize
BU of 2ar3 by Molmil
E90A mutant structure of PlyL
Descriptor: PHOSPHATE ION, ZINC ION, prophage lambdaba02, ...
Authors:Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C.
Deposit date:2005-08-19
Release date:2006-06-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and lytic activity of a Bacillus anthracis prophage endolysin.
J.Biol.Chem., 280, 2005
4BXD
DownloadVisualize
BU of 4bxd by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, AMPDH3, PEPTIDE, ...
Authors:Artola-Recolons, C, Hermoso, J.A.
Deposit date:2013-07-10
Release date:2013-10-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
4BXJ
DownloadVisualize
BU of 4bxj by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA
Descriptor: AMPDH3, GLYCEROL
Authors:Carrasco-Lopez, C, Hermoso, J.A.
Deposit date:2013-07-12
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
4BXE
DownloadVisualize
BU of 4bxe by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE
Descriptor: ACETATE ION, AMPDH3, ANHYDROMURAMIC PEPTIDE, ...
Authors:Artola-Recolons, C, Hermoso, J.A.
Deposit date:2013-07-10
Release date:2013-10-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
3UMQ
DownloadVisualize
BU of 3umq by Molmil
Crystal structure of peptidoglycan recognition protein-S complexed with butyric acid at 2.2 A resolution
Descriptor: GLYCEROL, Peptidoglycan recognition protein 1, butanoic acid
Authors:Pandey, N, Sharma, P, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-11-14
Release date:2012-07-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013

225158

數據於2024-09-18公開中

PDB statisticsPDBj update infoContact PDBjnumon