3D2Y
Complex of the N-acetylmuramyl-L-alanine amidase AmiD from E.coli with the substrate anhydro-N-acetylmuramic acid-L-Ala-D-gamma-Glu-L-Lys
Summary for 3D2Y
Entry DOI | 10.2210/pdb3d2y/pdb |
Related | 2BGX 2BH7 3D2Z |
Descriptor | N-acetylmuramoyl-L-alanine amidase amiD, Anhydro-N-acetylmuramic acid-L-Ala-D-gamma-Glu-L-Lys, GLYCEROL, ... (4 entities in total) |
Functional Keywords | zinc amidase, pgrp, peptidoglycan recognizing protein, ampd, n-acetylmuramyl-l-alanine amidase, cell wall biogenesis/degradation, hydrolase, lipoprotein, membrane, metal-binding, outer membrane, palmitate |
Biological source | Escherichia coli More |
Cellular location | Cell outer membrane; Lipid-anchor (Probable): P75820 |
Total number of polymer chains | 2 |
Total formula weight | 30165.05 |
Authors | Kerff, F.,Petrella, S.,Herman, R.,Sauvage, E.,Mercier, F.,Luxen, A.,Frere, J.M.,Joris, B.,Charlier, P. (deposition date: 2008-05-09, release date: 2009-06-16, Last modification date: 2023-08-30) |
Primary citation | Kerff, F.,Petrella, S.,Mercier, F.,Sauvage, E.,Herman, R.,Pennartz, A.,Zervosen, A.,Luxen, A.,Frere, J.M.,Joris, B.,Charlier, P. Specific Structural Features of the N-Acetylmuramoyl-l-Alanine Amidase AmiD from Escherichia coli and Mechanistic Implications for Enzymes of This Family. J.Mol.Biol., 397:249-259, 2010 Cited by PubMed: 20036252DOI: 10.1016/j.jmb.2009.12.038 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (1.75 Å) |
Structure validation
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