Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1AIR
DownloadVisualize
BU of 1air by Molmil
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI (EC16) TO A RESOLUTION OF 2.2 ANGSTROMS WITH 128 WATERS
Descriptor: PECTATE LYASE C, SULFATE ION
Authors:Lietzke, S.E, Scavetta, R.D, Yoder, M.D, Jurnak, F.A.
Deposit date:1997-04-24
Release date:1997-06-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Refined Three-Dimensional Structure of Pectate Lyase E from Erwinia chrysanthemi at 2.2 A Resolution.
Plant Physiol., 111, 1996
2WU2
DownloadVisualize
BU of 2wu2 by Molmil
Crystal structure of the E. coli succinate:quinone oxidoreductase (SQR) SdhC His84Met mutant
Descriptor: 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G.
Deposit date:2009-09-28
Release date:2010-08-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the E. Coli Succinate:Quinone Oxidoreductase (Sqr) Sdhc His84met Mutant
To be Published
3ET4
DownloadVisualize
BU of 3et4 by Molmil
Structure of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase
Descriptor: MAGNESIUM ION, Outer membrane protein P4, NADP phosphatase, ...
Authors:Tanner, J.J.
Deposit date:2008-10-06
Release date:2008-10-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of Recombinant Haemophilus Influenzae E (P4) Acid Phosphatase Reveals a New Member of the Haloacid Dehalogenase Superfamily.
Biochemistry, 46, 2007
3FK3
DownloadVisualize
BU of 3fk3 by Molmil
Structure of the Yeats Domain, Yaf9
Descriptor: Protein AF-9 homolog
Authors:Wang, A.Y, Schulze, J.M, Skordalakes, E, Berger, J.M, Rine, J, Kobor, M.S.
Deposit date:2008-12-15
Release date:2009-10-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Asf1-like structure of the conserved Yaf9 YEATS domain and role in H2A.Z deposition and acetylation
Proc.Natl.Acad.Sci.USA, 106, 2009
7N6S
DownloadVisualize
BU of 7n6s by Molmil
Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E in complex with 2'-deoxyuridine 5'-monophoephate (dUMP)
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-06-09
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E in complex with 2'-deoxyuridine 5'-monophoephate (dUMP)
to be published
7N56
DownloadVisualize
BU of 7n56 by Molmil
Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E
Descriptor: Deoxyuridine 5'-triphosphate nucleotidohydrolase, SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-06-04
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E
to be published
4YNC
DownloadVisualize
BU of 4ync by Molmil
OYE1 W116A COMPLEXED WITH (Z)-METHYL-3-CYANO-3-PHENYLACRYLATE IN A NON PRODUCTIVE BINDING MODE
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NADPH dehydrogenase 1, ...
Authors:Santangelo, S, Brenna, E, Stewart, J.D, Powell III, R.W.
Deposit date:2015-03-09
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.498 Å)
Cite:Opposite Enantioselectivity in the Bioreduction of (Z)-beta-Aryl-beta-cyanoacrylates Mediated by the Tryptophan 116 Mutants of Old Yellow Enzyme 1: Synthetic Approach to (R)- and (S)-beta-Aryl-gamma-lactams
Adv.Synth.Catal., 357, 2015
8AHM
DownloadVisualize
BU of 8ahm by Molmil
Crystal structure of tubulin in complex with C(13)/C(13')-Bis-Desmethyl-Disorazole Z
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Oliva, M.A, Diaz, J.F, Altmann, K.H.
Deposit date:2022-07-22
Release date:2022-11-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Synthesis and Biological Evaluation of C(13)/C(13')-Bis(desmethyl)disorazole Z.
Angew.Chem.Int.Ed.Engl., 62, 2023
2GUI
DownloadVisualize
BU of 2gui by Molmil
Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit of E. coli DNA Polymerase III
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase III epsilon subunit, ...
Authors:Park, A.Y, Carr, P.D, Ollis, D.L, Dixon, N.E.
Deposit date:2006-04-30
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Function of Cyclized Versions of the Proofreading Exonuclease Subunit E. coli DNA Polymerase III
To be Published
4YIL
DownloadVisualize
BU of 4yil by Molmil
OYE1 W116A COMPLEXED WITH (Z)-METHYL 3-CYANO-3-(4-FLUOROPHENYL)ACRYLATE IN A NON PRODUCTIVE BINDING MODE
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH dehydrogenase 1, ...
Authors:Santangelo, S, Brenna, E, Stewart, J.D, Powell III, R.W.
Deposit date:2015-03-02
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.461 Å)
Cite:Opposite Enantioselectivity in the Bioreduction of (Z)-beta-Aryl-beta-cyanoacrylates Mediated by the Tryptophan 116 Mutants of Old Yellow Enzyme 1: Synthetic Approach to (R)- and (S)-beta-Aryl-gamma-lactams
Adv.Synth.Catal., 357, 2015
5KTS
DownloadVisualize
BU of 5kts by Molmil
Crystal structure of Pyrococcus horikoshii quinolinate synthase (NadA) with bound citraconate and Fe4S4 cluster
Descriptor: (~{Z})-2-methylbut-2-enedioic acid, AMMONIUM ION, CHLORIDE ION, ...
Authors:Fenwick, M.K, Ealick, S.E.
Deposit date:2016-07-12
Release date:2016-07-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal Structures of the Iron-Sulfur Cluster-Dependent Quinolinate Synthase in Complex with Dihydroxyacetone Phosphate, Iminoaspartate Analogues, and Quinolinate.
Biochemistry, 55, 2016
7MT4
DownloadVisualize
BU of 7mt4 by Molmil
Crystal structure of tryptophan Synthase in complex with F9, NH4+, pH7.8 - alpha aminoacrylate form - E(A-A)
Descriptor: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, AMMONIUM ION, ...
Authors:Drago, V, Hilario, E, Dunn, M.F, Mueser, T.C, Mueller, L.J.
Deposit date:2021-05-12
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase alpha-aminoacrylate intermediate.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MT5
DownloadVisualize
BU of 7mt5 by Molmil
Crystal structure of tryptophan synthase in complex with F9, Cs+, pH7.8 - alpha aminoacrylate form - E(A-A)
Descriptor: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, CESIUM ION, ...
Authors:Drago, V, Hilario, E, Dunn, M.F, Mueser, T.C, Mueller, L.J.
Deposit date:2021-05-12
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase alpha-aminoacrylate intermediate.
Proc.Natl.Acad.Sci.USA, 119, 2022
1SIG
DownloadVisualize
BU of 1sig by Molmil
CRYSTAL STRUCTURE OF A SIGMA70 SUBUNIT FRAGMENT FROM ESCHERICHIA COLI RNA POLYMERASE
Descriptor: RNA POLYMERASE PRIMARY SIGMA FACTOR
Authors:Malhotra, A, Severinova, E, Darst, S.A.
Deposit date:1997-02-18
Release date:1997-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a sigma 70 subunit fragment from E. coli RNA polymerase.
Cell(Cambridge,Mass.), 87, 1996
2G8Y
DownloadVisualize
BU of 2g8y by Molmil
The structure of a putative malate/lactate dehydrogenase from E. coli.
Descriptor: 1,2-ETHANEDIOL, Malate/L-lactate dehydrogenases, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Cuff, M.E, Skarina, T, Edwards, A, Savchenko, A, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-03
Release date:2006-04-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure of a putative malate/lactate dehydrogenase from E. coli.
To be Published
7MT6
DownloadVisualize
BU of 7mt6 by Molmil
Crystal structure of tryptophan synthase in complex with F9, Cs+, benzimidazole, pH7.8 - alpha aminoacrylate form - E(A-A)(BZI)
Descriptor: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, BENZIMIDAZOLE, ...
Authors:Drago, V, Hilario, E, Dunn, M.F, Mueser, T.C, Mueller, L.J.
Deposit date:2021-05-12
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase alpha-aminoacrylate intermediate.
Proc.Natl.Acad.Sci.USA, 119, 2022
3TBI
DownloadVisualize
BU of 3tbi by Molmil
Crystal structure of T4 gp33 bound to E. coli RNAP beta-flap domain
Descriptor: DNA-directed RNA polymerase subunit beta, RNA polymerase-associated protein Gp33
Authors:Twist, K.A.F, Campbell, E.A, Darst, S.A.
Deposit date:2011-08-06
Release date:2011-11-23
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of T4 gp33 bound to E. coli RNAP beta-flap domain
To be Published
3TX1
DownloadVisualize
BU of 3tx1 by Molmil
X-ray crystal structure of Listeria monocytogenes EGD-e UDP-N-acetylenolpyruvylglucosamine reductase (MurB)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-22
Release date:2011-10-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:X-ray crystal structure of Listeria monocytogenes EGD-e UDP-N-acetylenolpyruvylglucosamine reductase (MurB).
TO BE PUBLISHED
3C0U
DownloadVisualize
BU of 3c0u by Molmil
Crystal structure of E.coli yaeQ protein
Descriptor: CHLORIDE ION, SULFATE ION, Uncharacterized protein yaeQ
Authors:Chang, C, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-01-21
Release date:2008-01-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of E.coli yaeQ protein.
To be Published
3CUO
DownloadVisualize
BU of 3cuo by Molmil
Crystal structure of the predicted DNA-binding transcriptional regulator from E. coli
Descriptor: Uncharacterized HTH-type transcriptional regulator ygaV
Authors:Zhang, R, Evdokimova, E, Kagan, O, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-16
Release date:2008-06-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the predicted DNA-binding transcriptional regulator from E. coli.
To be Published
3CYZ
DownloadVisualize
BU of 3cyz by Molmil
Dimeric crystal structure of a pheromone binding protein from Apis mellifera in complex with 9-keto-2(E)-decenoic acid at pH 7.0
Descriptor: (2Z)-9-oxodec-2-enoic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2008-04-27
Release date:2009-04-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
1TMH
DownloadVisualize
BU of 1tmh by Molmil
MODULAR MUTAGENESIS OF A TIM-BARREL ENZYME: THE CRYSTAL STRUCTURE OF A CHIMERIC E. COLI TIM HAVING THE EIGHTH (BETA-ALPHA)-UNIT REPLACED BY THE EQUIVALENT UNIT OF CHICKEN TIM
Descriptor: SULFATE ION, TRIOSEPHOSPHATE ISOMERASE
Authors:Radha Kishan, K.V, Zeelen, J.Ph, Wierenga, R.K.
Deposit date:1994-03-22
Release date:1994-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Modular mutagenesis of a TIM-barrel enzyme: the crystal structure of a chimeric E. coli TIM having the eighth beta alpha-unit replaced by the equivalent unit of chicken TIM.
Protein Eng., 7, 1994
5QHR
DownloadVisualize
BU of 5qhr by Molmil
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000635a
Descriptor: 1,2-ETHANEDIOL, N-(3-fluorophenyl)-5-methyl-1,3,4-thiadiazol-2-amine, Protein FAM83B
Authors:Pinkas, D.M, Bufton, J.C, Fox, A.E, Talon, R, Krojer, T, Douangamath, A, Collins, P, Zhang, R, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Bullock, A.N.
Deposit date:2018-05-18
Release date:2018-12-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
To Be Published
5DWG
DownloadVisualize
BU of 5dwg by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Triaryl-substituted Imine Analog, 4-{(E)-(4-hydroxyphenyl)[(2-methylphenyl)imino]methyl}benzene-1,3-diol
Descriptor: 4-{(E)-(4-hydroxyphenyl)[(2-methylphenyl)imino]methyl}benzene-1,3-diol, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Nwachukwu, J.C, Wright, N.J, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
Deposit date:2015-09-22
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
5DXM
DownloadVisualize
BU of 5dxm by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 3-[(E)-(1s,5s)-bicyclo[3.3.1]non-9-ylidene(4-hydroxyphenyl)methyl]phenol
Descriptor: 3-[(E)-(1s,5s)-bicyclo[3.3.1]non-9-ylidene(4-hydroxyphenyl)methyl]phenol, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
Deposit date:2015-09-23
Release date:2016-05-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon