PDB: 5653 resultsInfo pagesStatus searchChemie searchBIRD

---

3AVX	Structure of viral RNA polymerase complex 5 Descriptor: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ... Authors: Takeshita, D, Tomita, K. Deposit date: 2011-03-08 Release date: 2012-01-18 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.406 Å) Cite: Molecular basis for RNA polymerization by Q beta replicase Nat.Struct.Mol.Biol., 19, 2012
1I5E	CRYSTAL STRUCTURE OF BACILLUS CALDOLYTICUS URACIL PHOSPHORIBOSYLTRANSFERASE WITH BOUND UMP Descriptor: URACIL PHOSPHORIBOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE Authors: Kadziola, A, Neuhard, J, Larsen, S. Deposit date: 2001-02-27 Release date: 2002-06-05 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (3 Å) Cite: Structure of product-bound Bacillus caldolyticus uracil phosphoribosyltransferase confirms ordered sequential substrate binding. Acta Crystallogr.,Sect.D, 58, 2002
3ASZ	CMP-complex structure of uridine kinase from Thermus thermophilus HB8 Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Uridine kinase Authors: Tomoike, F, Nakagawa, N, Kuramitsu, S, Masui, R. Deposit date: 2010-12-22 Release date: 2011-06-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.25 Å) Cite: A Single Amino Acid Limits the Substrate Specificity of Thermus thermophilus Uridine-Cytidine Kinase to Cytidine Biochemistry, 50, 2011
4BPU	Crystal structure of human primase in heterodimeric form, comprising PriS and truncated PriL lacking the C-terminal Fe-S domain. Descriptor: DNA PRIMASE LARGE SUBUNIT, DNA PRIMASE SMALL SUBUNIT, GLYCEROL, ... Authors: Kilkenny, M.L, Perera, R.L, Pellegrini, L. Deposit date: 2013-05-28 Release date: 2013-09-25 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structures of Human Primase Reveal Design of Nucleotide Elongation Site and Mode of Pol Alpha Tethering Proc.Natl.Acad.Sci.USA, 110, 2013
3AVV	Structure of viral RNA polymerase complex 3 Descriptor: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ... Authors: Takeshita, D, Tomita, K. Deposit date: 2011-03-08 Release date: 2012-01-18 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.119 Å) Cite: Molecular basis for RNA polymerization by Q beta replicase Nat.Struct.Mol.Biol., 19, 2012
3AVY	Structure of viral RNA polymerase complex 6 Descriptor: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ... Authors: Takeshita, D, Tomita, K. Deposit date: 2011-03-08 Release date: 2012-01-18 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.616 Å) Cite: Molecular basis for RNA polymerization by Q beta replicase Nat.Struct.Mol.Biol., 19, 2012
3ASY	ligand-free structure of uridine kinase from thermus thermophilus HB8 Descriptor: Uridine kinase Authors: Tomoike, F, Nakagawa, N, Kuramitsu, S, Masui, R. Deposit date: 2010-12-22 Release date: 2011-06-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.4 Å) Cite: A Single Amino Acid Limits the Substrate Specificity of Thermus thermophilus Uridine-Cytidine Kinase to Cytidine Biochemistry, 50, 2011
1LT7	Oxidized Homo sapiens betaine-homocysteine S-methyltransferase in complex with four Sm(III) ions Descriptor: BETAINE-HOMOCYSTEINE METHYLTRANSFERASE, CITRIC ACID, SAMARIUM (III) ION Authors: Evans, J.C, Huddler, D.P, Jiracek, J, Castro, C, Millian, N.S, Garrow, T.A, Ludwig, M.L. Deposit date: 2002-05-20 Release date: 2002-09-11 Last modified: 2021-10-27 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Betaine-homocysteine methyltransferase: zinc in a distorted barrel. Structure, 10, 2002
3AV6	Crystal structure of mouse DNA methyltransferase 1 with AdoMet Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYLMETHIONINE, ZINC ION Authors: Takeshita, K, Suetake, I, Yamashita, E, Suga, M, Narita, H, Nakagawa, A, Tajima, S. Deposit date: 2011-02-22 Release date: 2011-05-04 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.09 Å) Cite: Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc.Natl.Acad.Sci.USA, 108, 2011
1NWH	Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Haemophilus influenzae as a Tetrahedral Hemithioacetal Reaction Intermediate at 2.0 A Descriptor: Aspartate-semialdehyde dehydrogenase Authors: Blanco, J, Moore, R.A, Viola, R.E. Deposit date: 2003-02-06 Release date: 2003-11-04 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2 Å) Cite: Capture of an Intermediate in the Catalytic Cycle of L-Aspartate-beta-Semialdehyde Dehydrogenase Proc.Natl.Acad.Sci.USA, 100, 2003
3AV5	Crystal structure of mouse DNA methyltransferase 1 with AdoHcy Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION Authors: Takeshita, K, Suetake, I, Yamashita, E, Suga, M, Narita, H, Nakagawa, A, Tajima, S. Deposit date: 2011-02-22 Release date: 2011-05-04 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.25 Å) Cite: Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc.Natl.Acad.Sci.USA, 108, 2011
1NPD	X-RAY STRUCTURE OF SHIKIMATE DEHYDROGENASE COMPLEXED WITH NAD+ FROM E.COLI (YDIB) NORTHEAST STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NESG) TARGET ER24 Descriptor: HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Benach, J, Kuzin, A.P, Lee, I, Rost, B, Chiang, Y, Acton, T.B, Montelione, G.T, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) Deposit date: 2003-01-17 Release date: 2003-01-28 Last modified: 2017-12-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The 2.3-A crystal structure of the shikimate 5-dehydrogenase orthologue YdiB from Escherichia coli suggests a novel catalytic environment for an NAD-dependent dehydrogenase J.Biol.Chem., 278, 2003
2OH6	The Crystal Structure of Recombinant Cypovirus Polyhedra Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ... Authors: Coulibaly, F, Chiu, E, Ikeda, K, Gutmann, S, Haebel, P.W, Schulze-Briese, C, Mori, H, Metcalf, P. Deposit date: 2007-01-09 Release date: 2007-03-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The molecular organization of cypovirus polyhedra. Nature, 446, 2007
2NQZ	Trna-guanine transglycosylase (TGT) mutant in complex with 7-deaza-7-aminomethyl-guanine Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, GLYCEROL, Queuine tRNA-ribosyltransferase, ... Authors: Tidten, N, Heine, A, Reuter, K, Klebe, G. Deposit date: 2006-11-01 Release date: 2007-11-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor Plos One, 8, 2013
7V0F	Structure of 6-carboxy-5,6,7,8-tetrahydropterin synthase paralog QueD2 from Acinetobacter baumannii Descriptor: 1,2-ETHANEDIOL, 6-carboxy-5,6,7,8-tetrahydropterin synthase, DI(HYDROXYETHYL)ETHER, ... Authors: Jordan, M.R, Gonzalez-Gutierrez, G, Giedroc, D.P. Deposit date: 2022-05-10 Release date: 2022-12-07 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Metal retention and replacement in QueD2 protect queuosine-tRNA biosynthesis in metal-starved Acinetobacter baumannii. Proc.Natl.Acad.Sci.USA, 119, 2022
7UKJ	In situ cryo-EM structure of bacteriophage Sf6 portal:gp7 complex at 2.7A resolution Descriptor: Gene 14 protein Authors: Li, F, Cingolani, G, Hou, C. Deposit date: 2022-04-01 Release date: 2022-12-21 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine. Sci Adv, 8, 2022
1JR1	Crystal structure of Inosine Monophosphate Dehydrogenase in complex with Mycophenolic Acid Descriptor: INOSINIC ACID, Inosine-5'-Monophosphate Dehydrogenase 2, MYCOPHENOLIC ACID, ... Authors: Sintchak, M.D, Fleming, M.A, Futer, O, Raybuck, S.A, Chambers, S.P, Caron, P.R, Murcko, M.A, Wilson, K.P. Deposit date: 2001-08-09 Release date: 2001-09-05 Last modified: 2017-10-04 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structure and mechanism of inosine monophosphate dehydrogenase in complex with the immunosuppressant mycophenolic acid. Cell(Cambridge,Mass.), 85, 1996
7UDY	Designed pentameric channel QLLL Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Designed channel QLLL Authors: Kratochvil, H.T, Thomaston, J.L, Liu, L, DeGrado, W.F. Deposit date: 2022-03-20 Release date: 2022-04-06 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Transient water wires mediate selective proton transport in designed channel proteins. Nat.Chem., 15, 2023
1Q9F	NMR STRUCTURE OF THE OUTER MEMBRANE PROTEIN OMPX IN DHPC MICELLES Descriptor: Outer membrane protein X Authors: Fernandez, C, Hilty, C, Wider, G, Guntert, P, Wuthrich, K. Deposit date: 2003-08-25 Release date: 2004-03-23 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR structure of the integral membrane protein OmpX. J.Mol.Biol., 336, 2004
1QB7	CRYSTAL STRUCTURES OF ADENINE PHOSPHORIBOSYLTRANSFERASE FROM LEISHMANIA DONOVANI. Descriptor: ADENINE, ADENINE PHOSPHORIBOSYLTRANSFERASE, CITRIC ACID, ... Authors: Phillips, C.L, Ullman, B, Brennan, R.G, Hill, C.P. Deposit date: 1999-04-30 Release date: 1999-07-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structures of adenine phosphoribosyltransferase from Leishmania donovani. EMBO J., 18, 1999
4DOI	Crystal structure of Arabidopsis thaliana chalcone isomerase At3g55120 (AtCHI) Descriptor: Chalcone--flavonone isomerase 1, NITRATE ION Authors: Noel, J.P, Louie, G.V, Bowman, M.E. Deposit date: 2012-02-09 Release date: 2012-05-09 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis. Nature, 485, 2012
4DOK	Crystal structure of Arabidopsis thaliana chalcone-isomerase like protein At5g05270 (AtCHIL) Descriptor: ACETATE ION, CALCIUM ION, Similarity to chalcone-flavonone isomerase Authors: Noel, J.P, Louie, G.V, Bowman, M.E. Deposit date: 2012-02-09 Release date: 2012-05-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Evolution of the chalcone-isomerase fold from fatty-acid binding to stereospecific catalysis. Nature, 485, 2012
2NV1	Structure of the synthase subunit Pdx1 (YaaD) of PLP synthase from Bacillus subtilis Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... Authors: Strohmeier, M, Tews, I, Sinning, I. Deposit date: 2006-11-10 Release date: 2006-12-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.08 Å) Cite: Structure of a bacterial pyridoxal 5'-phosphate synthase complex Proc.Natl.Acad.Sci.Usa, 103, 2006
2OH5	The Crystal Structure of Infectious Cypovirus Polyhedra Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ... Authors: Coulibaly, F, Chiu, E, Ikeda, K, Gutmann, S, Haebel, P.W, Schulze-Briese, C, Mori, H, Metcalf, P. Deposit date: 2007-01-09 Release date: 2007-03-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.98 Å) Cite: The molecular organization of cypovirus polyhedra. Nature, 446, 2007
4BPW	Crystal structure of human primase bound to UTP Descriptor: DNA PRIMASE LARGE SUBUNIT, DNA PRIMASE SMALL SUBUNIT, MAGNESIUM ION, ... Authors: Kilkenny, M.L, Perera, R.L, Pellegrini, L. Deposit date: 2013-05-28 Release date: 2013-09-25 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3.003 Å) Cite: Structures of Human Primase Reveal Design of Nucleotide Elongation Site and Mode of Pol Alpha Tethering Proc.Natl.Acad.Sci.USA, 110, 2013

<211212213214215216217218219220221222223224225226>