Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LXQ
DownloadVisualize
BU of 5lxq by Molmil
Structure of PRL-1 in complex with the Bateman domain of CNNM2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Metal transporter CNNM2, Protein tyrosine phosphatase type IVA 1, ...
Authors:GIMENEZ-Mascarell, P, Oyenarte, I, Hardy, S, Breiderhoff, T, Stuiver, M, Kostantin, E, Diercks, T, Pey, A.L, Ereno-ORBEA, J, Martinez-Chantar, M.L, Khalaf-Nazzal, R, Claverie-Martin, F, Muller, D, Tremblay, M, Martinez-Cruz, L.A.
Deposit date:2016-09-22
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.335 Å)
Cite:Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1 with the Magnesium Transporter CNNM2.
J. Biol. Chem., 292, 2017
5LZA
DownloadVisualize
BU of 5lza by Molmil
Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2016-09-29
Release date:2016-11-23
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
1DSC
DownloadVisualize
BU of 1dsc by Molmil
NMR STUDY OF DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
Authors:Lian, C, Robinson, H, Wang, A.H.-J.
Deposit date:1996-08-10
Release date:1996-12-07
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
J.Am.Chem.Soc., 118, 1996
1DY8
DownloadVisualize
BU of 1dy8 by Molmil
Inhibition of the Hepatitis C Virus NS3/4A Protease. The Crystal Structures of Two Protease-Inhibitor Complexes (inhibitor II)
Descriptor: N-[(benzyloxy)carbonyl]-L-isoleucyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide, NONSTRUCTURAL PROTEIN NS4A (P4), PROTEASE/HELICASE NS3 (P70)
Authors:Di Marco, S, Rizzi, M, Volpari, C, Walsh, M, Narjes, F, Colarusso, S, De Francesco, R, Matassa, V.G, Sollazzo, M.
Deposit date:2000-01-31
Release date:2001-01-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibition of the Hepatitis C Virus Ns3/4A Protease the Crystal Structures of Two Protease-Inhibitor Complexes
J.Biol.Chem., 275, 2000
9GGV
DownloadVisualize
BU of 9ggv by Molmil
Human KRas4A (GDP) in complex with compound 14
Descriptor: 1,2-ETHANEDIOL, 5-[(7-chloranyl-3-ethyl-4-oxidanyl-1,3-benzothiazol-2-yl)sulfamoyl]-~{N}-(2-hydroxyethyl)-2-oxidanyl-~{N}-piperidin-4-yl-benzamide, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5LY6
DownloadVisualize
BU of 5ly6 by Molmil
CryoEM structure of the membrane pore complex of Pneumolysin at 4.5A
Descriptor: Pneumolysin
Authors:van Pee, K, Neuhaus, A, D'Imprima, E, Mills, D.J, Kuehlbrandt, W, Yildiz, O.
Deposit date:2016-09-24
Release date:2017-04-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:CryoEM structures of membrane pore and prepore complex reveal cytolytic mechanism of Pneumolysin.
Elife, 6, 2017
1DWN
DownloadVisualize
BU of 1dwn by Molmil
Structure of bacteriophage PP7 from Pseudomonas aeruginosa at 3.7 A resolution
Descriptor: PHAGE COAT PROTEIN
Authors:Tars, K, Fridborg, K, Bundule, M, Liljas, L.
Deposit date:1999-12-09
Release date:2000-02-07
Last modified:2025-02-19
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure Determination of Phage Pp7 from Pseudomonas Aeruginosa: From Poor Data to a Good Map
Acta Crystallogr.,Sect.D, 56, 2000
9GH1
DownloadVisualize
BU of 9gh1 by Molmil
Human KRas4A (GMPPNP) in complex with compound 34
Descriptor: (3Z)-18-(4-aminocyclohexyl)-21-[[4-(2-aminoethylamino)cyclohexyl]amino]-7-chloro-10-hydroxy-2,2-dioxo-2lambda6,5-dithia-3,12,18,22-tetrazatetracyclo[18.3.1.04,12.06,11]tetracosa-1(23),3,6,8,10,20(24),21-heptaen-19-one, COBALT (II) ION, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
1DXX
DownloadVisualize
BU of 1dxx by Molmil
N-terminal Actin-binding Domain of Human Dystrophin
Descriptor: DYSTROPHIN
Authors:Norwood, F.L, Sutherland-Smith, A.J, Keep, N.H, Kendrick-Jones, J.
Deposit date:2000-01-20
Release date:2000-05-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structure of the N-Terminal Actin-Binding Domain of Human Dystrophin and How Mutations in This Domain May Cause Duchenne or Becker Muscular Dystrophy
Structure, 8, 2000
1DY5
DownloadVisualize
BU of 1dy5 by Molmil
Deamidated derivative of bovine pancreatic ribonuclease
Descriptor: ACETATE ION, ISOPROPYL ALCOHOL, RIBONUCLEASE A, ...
Authors:Esposito, L, Vitagliano, L, Sica, F, Zagari, A, Mazzarella, L.
Deposit date:2000-01-27
Release date:2000-03-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:The Ultrahigh Resolution Crystal Structure of Ribonuclease A Containing an Isoaspartyl Residue: Hydration and Sterochemical Analysis.
J.Mol.Biol., 297, 2000
5M0O
DownloadVisualize
BU of 5m0o by Molmil
Crystal structure of cytochrome P450 OleT H85Q in complex with arachidonic acid
Descriptor: 5,8,11,14,17-EICOSAPENTAENOIC ACID, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Tee, K.L, Munro, A, Matthews, S, Leys, D, Levy, C.
Deposit date:2016-10-05
Release date:2017-01-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.
J. Biol. Chem., 292, 2017
9G4B
DownloadVisualize
BU of 9g4b by Molmil
Human KRas4A (GDP) in complex with compound 15
Descriptor: (3Z)-7-chloro-10,21-dihydroxy-2,2-dioxo-18-(4-piperidyl)-2-lambda-6,5-dithia-3,12,18-triazatetracyclo[18.3.1.04,12.06,11]tetracosa-1(23),3,6,8,10,20(24),21-heptaen-19-one, 1,2-ETHANEDIOL, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-07-15
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5LYQ
DownloadVisualize
BU of 5lyq by Molmil
Crystal structure of the Retinoic Acid Receptor alpha in complex with a synthetic spiroketal agonist and a fragment of the TIF2 co-activator.
Descriptor: (2~{R})-6,6,9,9-tetramethylspiro[3,4,7,8-tetrahydrobenzo[g]chromene-2,2'-3,4-dihydrochromene]-6'-carboxylic acid, HIS-LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP, Retinoic acid receptor RXR-alpha
Authors:Andrei, S.A, Ottmann, C.
Deposit date:2016-09-28
Release date:2017-04-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Designed Spiroketal Protein Modulation.
Angew. Chem. Int. Ed. Engl., 56, 2017
8PFI
DownloadVisualize
BU of 8pfi by Molmil
Crystal structure of human TLR8 in complex with compound 34
Descriptor: (3~{S})-~{N}-[4-[[5-(1,6-dimethylpyrazolo[3,4-b]pyridin-4-yl)-3-methyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-1-yl]methyl]-1-bicyclo[2.2.2]octanyl]morpholine-3-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ...
Authors:Faller, M, Zink, F.
Deposit date:2023-06-16
Release date:2023-08-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.785 Å)
Cite:Discovery of the TLR7/8 Antagonist MHV370 for Treatment of Systemic Autoimmune Diseases.
Acs Med.Chem.Lett., 14, 2023
1E0Z
DownloadVisualize
BU of 1e0z by Molmil
[2Fe-2S]-Ferredoxin from Halobacterium salinarum
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN
Authors:Schweimer, K, Marg, B, Oesterhelt, D, Roesch, P, Sticht, H.
Deposit date:2000-04-11
Release date:2001-04-12
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:A Two-Alpha-Helix Extra Domain Mediates the Halophilic Character of a Plant-Type Ferredoxin from Halophilic Archaea.
Biochemistry, 44, 2005
5LYY
DownloadVisualize
BU of 5lyy by Molmil
Fragment-based inhibitors of Lipoprotein associated Phospholipase A2
Descriptor: 3-[2-(4-fluoranylphenoxy)ethyl]-1,3-diazaspiro[4.5]decane-2,4-dione, Platelet-activating factor acetylhydrolase
Authors:Woolford, A, Day, P.
Deposit date:2016-09-29
Release date:2016-12-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Fragment-Based Approach to the Development of an Orally Bioavailable Lactam Inhibitor of Lipoprotein-Associated Phospholipase A2 (Lp-PLA2).
J. Med. Chem., 59, 2016
1DIT
DownloadVisualize
BU of 1dit by Molmil
COMPLEX OF A DIVALENT INHIBITOR WITH THROMBIN
Descriptor: ALPHA-THROMBIN, PEPTIDE INHIBITOR CVS995
Authors:Tulinsky, A, Krishnan, R.
Deposit date:1995-07-20
Release date:1996-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis, structure, and structure-activity relationships of divalent thrombin inhibitors containing an alpha-keto-amide transition-state mimetic.
Protein Sci., 5, 1996
1M40
DownloadVisualize
BU of 1m40 by Molmil
ULTRA HIGH RESOLUTION CRYSTAL STRUCTURE OF TEM-1
Descriptor: BETA-LACTAMASE TEM, PHOSPHATE ION, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE, ...
Authors:Minasov, G, Wang, X, Shoichet, B.K.
Deposit date:2002-07-01
Release date:2002-07-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:An ultrahigh resolution structure of TEM-1 beta-lactamase suggests a role for Glu166 as the general base in acylation.
J.Am.Chem.Soc., 124, 2002
5LZF
DownloadVisualize
BU of 5lzf by Molmil
Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2016-09-29
Release date:2016-11-23
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
1DWU
DownloadVisualize
BU of 1dwu by Molmil
Ribosomal protein L1
Descriptor: RIBOSOMAL PROTEIN L1
Authors:Tishchenko, S.V, Nevskaya, N.A, Pavelyev, M.N, Nikonov, S.V, Garber, M.B, Piendl, W.
Deposit date:1999-12-13
Release date:2000-12-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Ribosomal Protein L1 from Methanococcus Thermolithotrophicus. Functionally Important Structural Invariants on the L1 Surface
Acta Crystallogr.,Sect.D, 58, 2002
9GGT
DownloadVisualize
BU of 9ggt by Molmil
Human KRas4A (GDP) in complex with compound 8
Descriptor: 1,2-ETHANEDIOL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5M0W
DownloadVisualize
BU of 5m0w by Molmil
N-terminal domain of mouse Shisa 3
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Lohkamp, B, Ojala, J.R.M.
Deposit date:2016-10-06
Release date:2017-04-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Ab initio solution of macromolecular crystal structures without direct methods.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1DZT
DownloadVisualize
BU of 1dzt by Molmil
RMLC FROM SALMONELLA TYPHIMURIUM
Descriptor: 3'-O-ACETYLTHYMIDINE-(5' DIPHOSPHATE PHENYL ESTER), 3'-O-ACETYLTHYMIDINE-5'-DIPHOSPHATE, DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, ...
Authors:Naismith, J.H, Giraud, M.F.
Deposit date:2000-03-07
Release date:2000-04-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rmlc, the Third Enzyme of Dtdp-L-Rhamnose Pathway, is a New Class of Epimerase.
Nat.Struct.Biol., 7, 2000
9GH2
DownloadVisualize
BU of 9gh2 by Molmil
Human KRas4A (GMPPNP) in complex with compound 36
Descriptor: (3Z)-18-(4-aminocyclohexyl)-21-[4-(4-amino-1-piperidyl)-1-piperidyl]-7-chloro-10-hydroxy-2,2-dioxo-2-lambda-6,5-dithia-3,12,18,22-tetrazatetracyclo[18.3.1.04,12.06,11]tetracosa-1(23),3,6,8,10,20(24),21-heptaen-19-one, COBALT (II) ION, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5M0Y
DownloadVisualize
BU of 5m0y by Molmil
Crystal Structure of the CohScaA-XDocCipB type II complex from Clostridium thermocellum at 1.5Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cellulosome anchoring protein cohesin region, ...
Authors:Pinheiro, B.A, Bras, J.L, Carvalho, A.L, Fontes, C.M.G.A.
Deposit date:2016-10-06
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diverse specificity of cellulosome attachment to the bacterial cell surface.
Sci Rep, 6, 2016

243911

數據於2025-10-29公開中

PDB statisticsPDBj update infoContact PDBjnumon