PDB: 183105 resultsInfo pagesStatus searchChemie searchBIRD

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3UMC	Crystal Structure of the L-2-Haloacid Dehalogenase PA0810 Descriptor: CHLORIDE ION, SODIUM ION, haloacid dehalogenase Authors: Petit, P, Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F. Deposit date: 2011-11-13 Release date: 2012-11-14 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination To be Published
3UP0	Nuclear receptor DAF-12 from hookworm Ancylostoma ceylanicum in complex with (25S)-delta7-dafachronic acid Descriptor: (5beta,14beta,17alpha,25S)-3-oxocholest-7-en-26-oic acid, Nuclear receptor coactivator 2, aceDAF-12 Authors: Zhi, X, Zhou, X.E, Melcher, K, Motola, D.L, Gelmedin, V, Hawdon, J, Kliewer, S.A, Mangelsdorf, D.J, Xu, H.E. Deposit date: 2011-11-17 Release date: 2011-12-14 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural Conservation of Ligand Binding Reveals a Bile Acid-like Signaling Pathway in Nematodes. J.Biol.Chem., 287, 2012
7RBX	Crystal structure of isocitrate lyase and phosphorylmutase:isocitrate lyase from Brucella melitensis biovar Abortus 2308 bound to itaconic acid Descriptor: 1,2-ETHANEDIOL, 2-methylidenebutanedioic acid, Isocitrase, ... Authors: Seattle Structural Genomics Center for Infectious Disease, Edwards, T.E, Abendroth, J, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2021-07-06 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Aconitate decarboxylase 1 participates in the control of pulmonary Brucella infection in mice. Plos Pathog., 17, 2021
6DJL	Crystal structure of the Rab11 GEF SH3BP5 bound to nucleotide free Rab11A Descriptor: Ras-related protein Rab-11A, SH3 domain-binding protein 5 Authors: Burke, J.E, Jenkins, M.L, Boulanger, M.J. Deposit date: 2018-05-25 Release date: 2018-09-26 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.10001159 Å) Cite: Structural determinants of Rab11 activation by the guanine nucleotide exchange factor SH3BP5. Nat Commun, 9, 2018
8SUG	Cryo-EM structure of the wild type P. aeruginosa flagellar filament Descriptor: B-type flagellin Authors: Kreutzberger, M.A, Nedeljkovic, M, Egelman, E.H, Sundberg, E.J. Deposit date: 2023-05-12 Release date: 2023-06-14 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: An unbroken network of interactions connecting flagellin domains is required for motility in viscous environments. Plos Pathog., 19, 2023
2XE5	Molecular insights into clinically isolated OmpC mutants and their role in multi-drug resistance (OmpC26) Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-(DIMETHYLAMINO)ETHANESULFONIC ACID, DECANE, ... Authors: Bamford, V.A, Naismith, J.H. Deposit date: 2010-05-11 Release date: 2010-05-26 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Altered Antibiotic Transport in Ompc Mutants Isolated from a Series of Clinical Strains of Multi-Drug Resistant E. Coli. Plos One, 6, 2011
8XIR	Structure of pasireotide-SSTR3 G protein complex Descriptor: G-alpha i, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: Wang, Y, Xu, Y, Xu, H.E, Zhuang, Y. Deposit date: 2023-12-19 Release date: 2024-07-03 Method: ELECTRON MICROSCOPY (2.52 Å) Cite: Selective ligand recognition and activation of somatostatin receptors SSTR1 and SSTR3 To Be Published
1VTD	UNUSUAL HELICAL PACKING IN CRYSTALS OF DNA BEARING A MUTATION HOT SPOT Descriptor: DNA (5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*GP*GP*CP*GP*CP*CP*GP*GP*T)-3') Authors: Timsit, Y, Westhof, E, Fuchs, R.P.P, Moras, D. Deposit date: 1996-12-12 Release date: 2011-07-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Unusual helical packing in crystals of DNA bearing a mutation hot spot. Nature, 341, 1989
8X8N	Cryo-EM structure of the octreotide-bound Somatostatin receptor 5-Gi protein complex Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha, ... Authors: Xu, H.E, You, C, Zhao, L, Li, J. Deposit date: 2023-11-27 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of the octreotide-bound Somatostatin receptor 5-Gi protein complex To Be Published
8ZBO	Crystal structure of the biphotochromic fluorescent protein moxSAASoti (F97M variant) in its green on-state Descriptor: 1,2-ETHANEDIOL, F97M variant of the biphotochromic fluorescent protein moxSAASoti, NITRATE ION, ... Authors: Boyko, K.M, Matyuta, I.O, Marynich, N.K, Minyaev, M.E, Khadiyatova, A.A, Popov, V.O, Savitsky, A.P. Deposit date: 2024-04-26 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and fluorescent study of the in cellulo crystallizable fluorescent protein moxSAASoti F97M To Be Published
1VDY	NMR Structure of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana Descriptor: hypothetical protein (RAFL09-17-B18) Authors: Lopez-Mendez, B, Pantoja-Uceda, D, Tomizawa, T, Koshiba, S, Kigawa, T, Shirouzu, M, Terada, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Seki, M, Shinozaki, K, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-03-25 Release date: 2005-05-03 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of the hypothetical ENTH-VHS domain AT3G16270 from arabidopsis thaliana To be Published
9AYW	SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhang, Q.E, Acharya, P. Deposit date: 2024-03-08 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3 Å) Cite: SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1) To Be Published
4NYU	Structure of Vibrio cholerae chitin de-N-acetylase in complex with acetate ion (ACT) in C 2 2 21 Descriptor: ACETATE ION, CALCIUM ION, Deacetylase DA1, ... Authors: Albesa-Jove, D, Andres, E, Biarnes, X, Planas, A, Guerin, M.E. Deposit date: 2013-12-11 Release date: 2014-08-13 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Structural basis of chitin oligosaccharide deacetylation. Angew.Chem.Int.Ed.Engl., 53, 2014
5K97	Flap endonuclease 1 (FEN1) D233N with cleaved product fragment and Sm3+ Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), ... Authors: Tsutakawa, S.E, Arvai, A.S, Tainer, J.A. Deposit date: 2016-05-31 Release date: 2017-06-28 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.102 Å) Cite: Phosphate steering by Flap Endonuclease 1 promotes 5'-flap specificity and incision to prevent genome instability. Nat Commun, 8, 2017
4F3T	Human Argonaute-2 - miR-20a complex Descriptor: PHENOL, Protein argonaute-2, RNA (5'-R(P*UP*AP*AP*AP*GP*UP*GP*CP*UP*UP*AP*UP*AP*GP*UP*G*CP*AP*GP*G)-3') Authors: Elkayam, E, Kuhn, C.-D, Tocilj, A, Joshua-Tor, L. Deposit date: 2012-05-09 Release date: 2012-05-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.25 Å) Cite: The Structure of Human Argonaute-2 in Complex with miR-20a. Cell(Cambridge,Mass.), 150, 2012
8Y95	Structure of NET-NE in Occluded state Descriptor: CHLORIDE ION, Noradrenaline, SODIUM ION, ... Authors: Zhang, H, Xu, H.E, Jiang, Y. Deposit date: 2024-02-06 Release date: 2024-05-29 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.24 Å) Cite: Dimerization and antidepressant recognition at noradrenaline transporter. Nature, 630, 2024
8XIP	Structure of Pasireotide-SSTR1 G protein complex Descriptor: 004-DTR-LYS-TY5-PHE-A1D5E, G-alpha i, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Wang, Y, Xu, Y, Xu, H.E, Zhuang, Y. Deposit date: 2023-12-19 Release date: 2024-07-03 Method: ELECTRON MICROSCOPY (3.29 Å) Cite: Selective ligand recognition and activation of somatostatin receptors SSTR1 and SSTR3 To Be Published
8ZJD	Cryo-EM structure of kisspeptin receptor bound to KP-10 Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha, ... Authors: Shen, S, Liu, H, Xu, H.E. Deposit date: 2024-05-14 Release date: 2024-07-03 Method: ELECTRON MICROSCOPY (3.06 Å) Cite: Cryo-EM structure of kisspeptin receptor bound to KP-10 To Be Published
9AYX	SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-EG.5.1) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhang, Q.E, Acharya, P. Deposit date: 2024-03-08 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3 Å) Cite: SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 2 (S-GSAS-Omicron-EG.5.1) To Be Published
7LKQ	The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX(GGDEF-EAL), MAGNESIUM ION, ... Authors: Llontop, E.E, Guzzo, C.R, Farah, C.S. Deposit date: 2021-02-02 Release date: 2021-08-11 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.4 Å) Cite: The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri. Plos Pathog., 17, 2021
9BP6	Structure of alpha1B and betaI/IVb microtubule bound to GMPCPP Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... Authors: Zehr, E.A, Roll-Mecak, A. Deposit date: 2024-05-07 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structures of human alpha 1B/ beta I+ beta IVb microtubules shed light on isoform specific assembly Biorxiv, 2023
1VQ5	The structure of the transition state analogue "RAA" bound to the large ribosomal subunit of haloarcula marismortui Descriptor: 23S ribosomal rna, 5'-D(*(DC)P*(DC)P*(5AA)P*(2OP)P*(PO2)P*AP*C*C)-3'), 50S RIBOSOMAL PROTEIN L10E, ... Authors: Schmeing, T.M, Steitz, T.A. Deposit date: 2004-12-16 Release date: 2005-11-29 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural Insights into the Roles of Water and the 2' Hydroxyl of the P Site tRNA in the Peptidyl Transferase Reaction. Mol.Cell, 20, 2005
8XIO	Structure of L797591-SSTR1 G protein complex Descriptor: (2~{S})-~{N}-[(4~{S})-6-azanyl-2,2,4-trimethyl-hexyl]-3-naphthalen-1-yl-2-[[2-phenylethyl(2-pyridin-2-ylethyl)carbamoyl]amino]propanamide, G-alpha-i, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Wang, Y, Xu, Y, Xu, H.E, Zhuang, Y. Deposit date: 2023-12-19 Release date: 2024-07-03 Method: ELECTRON MICROSCOPY (2.65 Å) Cite: Selective ligand recognition and activation of somatostatin receptors SSTR1 and SSTR3 To Be Published
3UE5	ECP-cleaved Actin in complex with Spir domain D Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ... Authors: Chen, C, Phillips, M, Sawaya, M.R, Ralston, C.Y, Quinlan, M.E. Deposit date: 2011-10-28 Release date: 2012-02-15 Last modified: 2012-04-11 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Multiple Forms of Spire-Actin Complexes and their Functional Consequences. J.Biol.Chem., 287, 2012
8ZJE	Cryo-EM structure of kisspeptin receptor bound to TAK-448 Descriptor: ACY-DTY-HYP-ASN-THR-PHE-XZA-LEU-NMM-TRP-NH2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: Shen, S, Liu, H, Xu, H.E. Deposit date: 2024-05-14 Release date: 2024-07-03 Method: ELECTRON MICROSCOPY (3.07 Å) Cite: Cryo-EM structure of kisspeptin receptor bound to TAK-448 To Be Published

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