Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6V4Q
DownloadVisualize
BU of 6v4q by Molmil
Crystal structure of a MR78-like antibody naive-1 Fab
Descriptor: GLYCEROL, ISOPROPYL ALCOHOL, Naive-1 Fab heavy chain, ...
Authors:Bozhanova, N.G, Crowe, J.E, Meiler, J.
Deposit date:2019-11-28
Release date:2020-11-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Discovery of Marburg virus neutralizing antibodies from virus-naive human antibody repertoires using large-scale structural predictions.
Proc.Natl.Acad.Sci.USA, 117, 2020
8BM8
DownloadVisualize
BU of 8bm8 by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 11
Descriptor: Ephrin type-A receptor 2, ~{N}-(3-cyanophenyl)-4-methyl-3-[(1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-yl)amino]benzamide
Authors:Linhard, V, Witt, K, Gande, S, Wollenhaupt, J, Lennartz, F, Weiss, M.S, Schwalbe, H.
Deposit date:2022-11-10
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:(placeholder, will be filled after publication)
To Be Published
8BVX
DownloadVisualize
BU of 8bvx by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264
Descriptor: 1,2-ETHANEDIOL, N-glycosylase/DNA lyase, NICKEL (II) ION, ...
Authors:Scaletti, E, Stenmark, P.
Deposit date:2022-12-05
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264
To Be Published
6MM5
DownloadVisualize
BU of 6mm5 by Molmil
Catalytic subunit of cAMP-dependent protein kinase A in complex with RyR2 peptide (2799-2810)
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:van Petegem, F, Haji-Ghassemi, O.
Deposit date:2018-09-29
Release date:2019-05-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:cAMP-dependent protein kinase A in complex with RyR2 peptide (2799-2810)
Mol.Cell, 2019
9FCL
DownloadVisualize
BU of 9fcl by Molmil
CysG(N-16) in complex with SAM from Kitasatospora cystarginea
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
Deposit date:2024-05-15
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
9FCD
DownloadVisualize
BU of 9fcd by Molmil
CysG(N-16) in complex with SAH from Kitasatospora cystarginea
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CARBONATE ION, ...
Authors:Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
Deposit date:2024-05-15
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
9FCX
DownloadVisualize
BU of 9fcx by Molmil
CysG(N-16)-H121N mutant in complex with SAH from Kitasatospora cystarginea
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
Authors:Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
Deposit date:2024-05-16
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
6VB3
DownloadVisualize
BU of 6vb3 by Molmil
HLA-B*15:01 complexed with a synthetic peptide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Beta-2-microglobulin, ...
Authors:Schutte, R.J, Li, D, Ostrov, D.A.
Deposit date:2019-12-18
Release date:2020-11-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:HLA-B*15:01 complexed with a synthetic peptide
To Be Published
8YEL
DownloadVisualize
BU of 8yel by Molmil
Cryo-EM structure of the channelrhodopsin GtCCR4
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cation channel rhodopsin 4, RETINAL
Authors:Tanaka, T, Iida, W, Sano, F.K, Oda, K, Shihoya, W, Nureki, O.
Deposit date:2024-02-22
Release date:2024-09-04
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:The high-light-sensitivity mechanism and optogenetic properties of the bacteriorhodopsin-like channelrhodopsin GtCCR4.
Mol.Cell, 84, 2024
8CHT
DownloadVisualize
BU of 8cht by Molmil
Crystal structure of human PURA (fragment Glu57-Glu212, PUR repeat I and II)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Transcriptional activator protein Pur-alpha
Authors:Janowski, R, Niessing, D.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:PURA syndrome-causing mutations impair PUR-domain integrity and affect P-body association.
Elife, 13, 2024
9O9V
DownloadVisualize
BU of 9o9v by Molmil
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NCS.1.1 Heavy Chain, ...
Authors:Borst, A.J.
Deposit date:2025-04-18
Release date:2025-08-13
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural convergence and water-mediated substrate mimicry enable broad neuraminidase inhibition by human antibodies.
Nat Commun, 16, 2025
9O2Q
DownloadVisualize
BU of 9o2q by Molmil
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 0 (unbound)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:DeLaitsch, A.T, Bjorkman, P.J.
Deposit date:2025-04-04
Release date:2025-10-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Identification of a broad and potent V3 glycan site bNAb targeting an N332 gp120 glycan-independent epitope.
Biorxiv, 2025
6CUH
DownloadVisualize
BU of 6cuh by Molmil
Crystal structure of the unliganded BC8B TCR
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shahine, A.E, Rossjohn, J.
Deposit date:2018-03-26
Release date:2019-01-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A T-cell receptor escape channel allows broad T-cell response to CD1b and membrane phospholipids.
Nat Commun, 10, 2019
7NMF
DownloadVisualize
BU of 7nmf by Molmil
Human MHC Class I, A24 Allele presenting QLPRLFPLL, Complex with 4C6 TCR, monoclinic form
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLN-LEU-PRO-ARG-LEU-PHE-PRO-LEU-LEU, ...
Authors:Rizkallah, P.J, Sewell, A.K, Cole, D.K, Wall, A.
Deposit date:2021-02-23
Release date:2022-09-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Human MHC Class I, A24 Allele presenting QLPRLFPLL, Complex with 4C6 TCR, monoclinic form
To Be Published
7A4Y
DownloadVisualize
BU of 7a4y by Molmil
Crystal structure of the P5P6 coiled-coil in complex with nanobody Nb34.
Descriptor: 1,2-ETHANEDIOL, Coiled-coil P5 peptide, Coiled-coil P6 peptide, ...
Authors:Hadzi, S.
Deposit date:2020-08-20
Release date:2021-05-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.157 Å)
Cite:A nanobody toolbox targeting dimeric coiled-coil modules for functionalization of designed protein origami structures.
Proc.Natl.Acad.Sci.USA, 118, 2021
6MTR
DownloadVisualize
BU of 6mtr by Molmil
Crystal structure of VRC43.01 Fab
Descriptor: Antibody VRC43.01 Fab heavy chain, Antibody VRC43.01 Fab light chain
Authors:Kwon, Y.D, Druz, A, Law, W.H, Peng, D, Zhang, B, Doria-Rose, N.A, Kwong, P.D.
Deposit date:2018-10-21
Release date:2019-03-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Longitudinal Analysis Reveals Early Development of Three MPER-Directed Neutralizing Antibody Lineages from an HIV-1-Infected Individual.
Immunity, 50, 2019
6UZQ
DownloadVisualize
BU of 6uzq by Molmil
HLA-B*15:01 complexed with a synthetic peptide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Beta-2-microglobulin, ...
Authors:Schutte, R.J, Li, D, Ostrov, D.A.
Deposit date:2019-11-15
Release date:2020-11-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.395 Å)
Cite:HLA-B*15:01 complexed with a synthetic peptide
To Be Published
6MSC
DownloadVisualize
BU of 6msc by Molmil
Novel, potent, selective and brain penetrant phosphodiesterase 10A inhibitors
Descriptor: 8-fluoro-6-methoxy-3-methyl-1-(3-methylpyridin-4-yl)-3H-pyrazolo[3,4-c]cinnoline, MAGNESIUM ION, ZINC ION, ...
Authors:Jakob, C.G.
Deposit date:2018-10-16
Release date:2019-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Novel, potent, selective, and brain penetrant phosphodiesterase 10A inhibitors.
Bioorg. Med. Chem. Lett., 29, 2019
8SZP
DownloadVisualize
BU of 8szp by Molmil
Human DHX9 bound to ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase A, ...
Authors:Lee, Y.-T, Sickmier, E.A, Grigoriu, S, Boriack-Sjodin, P.A.
Deposit date:2023-05-30
Release date:2023-08-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structures of the DExH-box RNA helicase DHX9.
Acta Crystallogr D Struct Biol, 79, 2023
7Z3W
DownloadVisualize
BU of 7z3w by Molmil
Crystal structure of the AAL160 Fab
Descriptor: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, AAL160 Fab heavy-chain, AAL160 Fab light-chain
Authors:Rondeau, J.M, Lehmann, S.
Deposit date:2022-03-02
Release date:2023-02-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:"Redirecting an anti-IL-1 beta antibody to bind a new, unrelated and computationally predicted epitope on hIL-17A".
Commun Biol, 6, 2023
8J43
DownloadVisualize
BU of 8j43 by Molmil
Reductive aminase RA29-WT
Descriptor: 1,2-ETHANEDIOL, Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase, ...
Authors:Zheng, X.Y, Xu, G.C, Ni, Y.
Deposit date:2023-04-19
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Dynamic kinetic reductive resolution of cyclic keto esters by newly identified stereo complementary reductive aminases.
To Be Published
6VDJ
DownloadVisualize
BU of 6vdj by Molmil
Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and NADH4.
Descriptor: 1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, SULFATE ION, lactate dehydrogenase
Authors:Theobald, D.L, Wirth, J.D, Classen, S, Perlmutter, N.
Deposit date:2019-12-27
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of Bifunctionality in an Ancestral Apicomplexan Malate/Lactate Dehydrogenase
To Be Published
8C6D
DownloadVisualize
BU of 8c6d by Molmil
Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Descriptor: (2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol, Genome polyprotein, Genome polyprotein (Fragment)
Authors:Kingston, N.J, Snowden, J.S, Stonehouse, N.J, Rowlands, D.J, Hogle, J.M.
Deposit date:2023-01-11
Release date:2023-02-22
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Biorxiv, 2023
7QF9
DownloadVisualize
BU of 7qf9 by Molmil
Crystal structure of PDE6D bound to HRas peptide
Descriptor: 1,2-ETHANEDIOL, FARNESYL, HRas peptide, ...
Authors:Yelland, T, Ismail, I.
Deposit date:2021-12-05
Release date:2022-02-09
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling.
J.Med.Chem., 65, 2022
7O21
DownloadVisualize
BU of 7o21 by Molmil
Structure of Bdellovibrio bacteriovorus Bd1075
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Lovering, A.L, Valdivia-Delgado, M.
Deposit date:2021-03-30
Release date:2021-04-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Asymmetric peptidoglycan editing generates cell curvature in Bdellovibrio predatory bacteria.
Nat Commun, 13, 2022

244349

數據於2025-11-05公開中

PDB statisticsPDBj update infoContact PDBjnumon