Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MEN
DownloadVisualize
BU of 4men by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a 5-methyl-triazolopyrimidine ligand
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, N,5-dimethyl-N-(4-methylbenzyl)[1,2,4]triazolo[1,5-a]pyrimidin-7-amine
Authors:Filippakopoulos, P, Picaud, S, Felletar, I, Martin, S, Fedorov, O, Vidler, L.R, Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Hoelder, S, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-08-27
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Discovery of Novel Small-Molecule Inhibitors of BRD4 Using Structure-Based Virtual Screening.
J.Med.Chem., 56, 2013
4LSO
DownloadVisualize
BU of 4lso by Molmil
Crystal structure of the soluble domain of a Type IV secretion system protein VirB8 from Bartonella quintana Toulouse
Descriptor: Type IV secretion system protein virB8
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-07-22
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Insight into How Bacteria Prevent Interference between Multiple Divergent Type IV Secretion Systems.
MBio, 6, 2015
4LYH
DownloadVisualize
BU of 4lyh by Molmil
Crystal Structure of small molecule vinylsulfonamide 9 covalently bound to K-Ras G12C
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, N-{1-[N-(4-chloro-5-iodo-2-methoxyphenyl)glycyl]piperidin-4-yl}ethanesulfonamide, ...
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-07-31
Release date:2013-11-27
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.371 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
4M1T
DownloadVisualize
BU of 4m1t by Molmil
Crystal Structure of small molecule vinylsulfonamide 14 covalently bound to K-Ras G12C
Descriptor: GUANOSINE-5'-DIPHOSPHATE, K-Ras GTPase, N-{1-[(2,4-dichlorophenoxy)acetyl]piperidin-4-yl}ethanesulfonamide
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-08-04
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
4K2X
DownloadVisualize
BU of 4k2x by Molmil
OxyS anhydrotetracycline hydroxylase from Streptomyces rimosus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Polyketide oxygenase/hydroxylase
Authors:Wang, P, Sawaya, M.R, Tang, Y.
Deposit date:2013-04-09
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Uncovering the Enzymes that Catalyze the Final Steps in Oxytetracycline Biosynthesis.
J.Am.Chem.Soc., 135, 2013
4K6X
DownloadVisualize
BU of 4k6x by Molmil
Crystal structure of disulfide oxidoreductase from Mycobacterium tuberculosis
Descriptor: 1,4-DIETHYLENE DIOXIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Disulfide oxidoreductase
Authors:Premkumar, L, Martin, J.L.
Deposit date:2013-04-16
Release date:2013-10-02
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Rv2969c, essential for optimal growth in Mycobacterium tuberculosis, is a DsbA-like enzyme that interacts with VKOR-derived peptides and has atypical features of DsbA-like disulfide oxidases.
Acta Crystallogr.,Sect.D, 69, 2013
4KB6
DownloadVisualize
BU of 4kb6 by Molmil
Structure of porcine cyclic GMP AMP synthase (CGAS) in complex with DNA, ATP and GTP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*CP*GP*AP*CP*GP*CP*TP*AP*GP*CP*GP*TP*CP*G)-3'), GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Deimling, T, Hopfner, K.-P.
Deposit date:2013-04-23
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.0754 Å)
Cite:Structural mechanism of cytosolic DNA sensing by cGAS.
Nature, 498, 2013
4KPE
DownloadVisualize
BU of 4kpe by Molmil
Novel fluoroquinolones in complex with topoisomerase IV from S. pneumoniae and E-site G-gate
Descriptor: (7aR,8R)-8-amino-4-cyclopropyl-12-fluoro-1-oxo-4,7,7a,8,9,10-hexahydro-1H-pyrrolo[1',2':1,7]azepino[2,3-h]quinoline-2-carboxylic acid, DNA topoisomerase 4 subunit A, DNA topoisomerase 4 subunit B, ...
Authors:Laponogov, I, Pan, X.-S, Vesekov, D.A, Cirz, R.T, Wagman, A.S, Moser, H.E, Fisher, L.M, Sanderson, M.R.
Deposit date:2013-05-13
Release date:2014-11-26
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:Exploring the active site of the Streptococcus pneumoniae topoisomerase IV-DNA cleavage complex with novel 7,8-bridged fluoroquinolones.
Open Biol, 6, 2016
4KHB
DownloadVisualize
BU of 4khb by Molmil
Structure of the Spt16D Pob3N heterodimer
Descriptor: SULFATE ION, Uncharacterized protein POB3N, Uncharacterized protein SPT16D
Authors:Stuwe, T, Zhang, E, Ladurner, A.G.
Deposit date:2013-04-30
Release date:2013-05-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of histone H2A-H2B recognition by the essential chaperone FACT.
Nature, 499, 2013
4M1S
DownloadVisualize
BU of 4m1s by Molmil
Crystal Structure of small molecule vinylsulfonamide 13 covalently bound to K-Ras G12C
Descriptor: GUANOSINE-5'-DIPHOSPHATE, K-Ras GTPase, N-{1-[N-(2,4-dichlorophenyl)glycyl]piperidin-4-yl}ethanesulfonamide
Authors:Ostrem, J.M, Peters, U, Sos, M.L, Wells, J.A, Shokat, K.M.
Deposit date:2013-08-04
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions.
Nature, 503, 2013
4M2L
DownloadVisualize
BU of 4m2l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in nucleotide-free form
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, SULFATE ION, ...
Authors:Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
Deposit date:2013-08-05
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M06
DownloadVisualize
BU of 4m06 by Molmil
Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145F in Complex with Cyanide
Descriptor: 1,2-ETHANEDIOL, CYANIDE ION, Chlorite dismutase, ...
Authors:Hagmueller, A, Gysel, K, Djinovic-Carugo, K.
Deposit date:2013-08-01
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Manipulating conserved heme cavity residues of chlorite dismutase: effect on structure, redox chemistry, and reactivity.
Biochemistry, 53, 2014
4M8A
DownloadVisualize
BU of 4m8a by Molmil
Crystal Structure of Thermotoga maritima FtsH Periplasmic Domain
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ATP-dependent zinc metalloprotease FtsH
Authors:An, J.Y, Sharif, H, Barrera, F.N, Karabadzhak, A, Kang, G.B, Park, K.J, Sakkiah, S, Lee, K.W, Lee, S, Engelman, D.M, Wang, J, Eom, S.H.
Deposit date:2013-08-13
Release date:2014-09-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Structural roles of periplasmic and transmembrane domains of FtsH in ATP-dependent proteolysis
To be Published
4LQS
DownloadVisualize
BU of 4lqs by Molmil
Crystal structure of the Cbk1-Mob2 kinase-coactivator complex
Descriptor: CBK1 kinase activator protein MOB2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase CBK1
Authors:Gogl, G, Remenyi, A.
Deposit date:2013-07-19
Release date:2014-07-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The Structure of an NDR/LATS Kinase-Mob Complex Reveals a Novel Kinase-Coactivator System and Substrate Docking Mechanism.
Plos Biol., 13, 2015
4KY9
DownloadVisualize
BU of 4ky9 by Molmil
Structural and Functional Analysis of a Putative Substrate Access Tunnel in the Cytosolic Domain of Human Anion Exchanger 1
Descriptor: Band 3 anion transport protein
Authors:Shnitsar, V, Calmettes, C, Reithmeier, R.A.F, Moraes, T.F.
Deposit date:2013-05-28
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:A substrate access tunnel in the cytosolic domain is not an essential feature of the solute carrier 4 (SLC4) family of bicarbonate transporters.
J.Biol.Chem., 288, 2013
4L59
DownloadVisualize
BU of 4l59 by Molmil
Crystal structure of the 3-MBT repeat domain of L3MBTL3 and UNC2533 complex
Descriptor: 4-(pyrrolidin-1-yl)-1-{4-[2-(pyrrolidin-1-yl)ethyl]phenyl}piperidine, Lethal(3)malignant brain tumor-like protein 3, SULFATE ION, ...
Authors:Zhong, N, Dong, A, Ravichandran, M, Camerino, M.A, Dickson, B.M, James, L.I, Baughman, B.M, Norris, J.L, Kireev, D.B, Janzen, W.P, Graslund, S, Frye, S.V, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2013-06-10
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:The structure-activity relationships of L3MBTL3 inhibitors: flexibility of the dimer interface.
Medchemcomm, 4, 2013
4L5H
DownloadVisualize
BU of 4l5h by Molmil
Structure of haze forming proteins in white wines: Vitis vinifera thaumatin-like proteins
Descriptor: GLYCEROL, VVTL1
Authors:Marangon, M, Menz, R.I, Waters, E.J, Van Sluyter, S.C.
Deposit date:2013-06-11
Release date:2013-07-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Haze Forming Proteins in White Wines: Vitis vinifera Thaumatin-Like Proteins.
Plos One, 9, 2014
4L5K
DownloadVisualize
BU of 4l5k by Molmil
Crystal structure of the complex of DNA hexamer d(CGATCG) with Coptisine
Descriptor: 6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium, DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P.
Deposit date:2013-06-11
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structure of the complex of DNA hexamer d(CGATCG) with Coptisine
to be published
4L63
DownloadVisualize
BU of 4l63 by Molmil
Apo form of AB5 holotoxin
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ECXA, ECXB, ...
Authors:Littler, D.R, Ng, N.M, Rossjohn, J, Beddoe, T.
Deposit date:2013-06-11
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:EcxAB Is a Founding Member of a New Family of Metalloprotease AB5 Toxins with a Hybrid Cholera-like B Subunit.
Structure, 21, 2013
4L81
DownloadVisualize
BU of 4l81 by Molmil
Structure of the SAM-I/IV riboswitch (env87(deltaU92, deltaG93))
Descriptor: COBALT HEXAMMINE(III), MAGNESIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Trausch, J.J, Reyes, F.E, Edwards, A.L, Batey, R.T.
Deposit date:2013-06-15
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for diversity in the SAM clan of riboswitches.
Proc.Natl.Acad.Sci.USA, 111, 2014
4L95
DownloadVisualize
BU of 4l95 by Molmil
Crystal structure of gamma glutamyl hydrolase (H218N) from zebrafish
Descriptor: GLYCEROL, Gamma-glutamyl hydrolase
Authors:Chuankhayan, P, Kao, T.-T, Chen, C.-J, Fu, T.-F.
Deposit date:2013-06-18
Release date:2014-05-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural insights into the hydrolysis and polymorphism of methotrexate polyglutamate by zebrafish gamma-glutamyl hydrolase
J.Med.Chem., 56, 2013
4L9V
DownloadVisualize
BU of 4l9v by Molmil
Crystal structure of Se-Met derivative MepR F27L mutant from multidrug resistant S. aureus clinical isolate
Descriptor: MepR
Authors:Birukou, I, Brennan, R.G.
Deposit date:2013-06-18
Release date:2013-09-11
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.374 Å)
Cite:The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus.
MBio, 4, 2013
4IIH
DownloadVisualize
BU of 4iih by Molmil
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with thiocellobiose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S.
Deposit date:2012-12-20
Release date:2013-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Biochem.J., 452, 2013
4IL8
DownloadVisualize
BU of 4il8 by Molmil
Crystal structure of an H329A mutant of p. aeruginosa PMM/PGM
Descriptor: GLYCEROL, MAGNESIUM ION, Phosphomannomutase/phosphoglucomutase
Authors:Lee, Y, Mehra-Chaudhary, R, Furdui, C, Beamer, L.
Deposit date:2012-12-29
Release date:2013-08-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of an essential active-site residue in the alpha-D-phosphohexomutase enzyme superfamily.
Febs J., 280, 2013
4IH5
DownloadVisualize
BU of 4ih5 by Molmil
Hepatitis C Virus polymerase NS5B (BK) with fragment-based compounds
Descriptor: 4-(2-phenylhydrazinyl)-1H-pyrazolo[3,4-d]pyrimidine, RNA-directed RNA polymerase
Authors:Harris, S.F, Ghate, M.
Deposit date:2012-12-18
Release date:2013-07-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:De novo fragment design: a medicinal chemistry approach to fragment-based lead generation.
J.Med.Chem., 56, 2013

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon