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5U9A
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BU of 5u9a by Molmil
Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-15
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7W7C
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BU of 7w7c by Molmil
Heme exporter in the unliganded form
Descriptor: Putative ABC transport system integral membrane protein, Putative ABC transport system, ATP-binding protein, ...
Authors:Rahman, M.M, Hisano, T, Nakamura, H, Tosha, T, Shirouzu, M, Shiro, Y.
Deposit date:2021-12-04
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7KIP
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BU of 7kip by Molmil
A 3.4 Angstrom cryo-EM structure of the human coronavirus spike trimer computationally derived from vitrified NL63 virus particles
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Zhang, K, Li, S, Pintilie, G, Chmielewski, D, Schmid, M, Simmons, G, Jin, J, Chiu, W.
Deposit date:2020-10-24
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:A 3.4- angstrom cryo-EM structure of the human coronavirus spike trimer computationally derived from vitrified NL63 virus particles.
Biorxiv, 2020
5U5L
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BU of 5u5l by Molmil
X-ray Crystal Structure of the PPARgamma Ligand Binding Domain in Complex with Rivoglitazone
Descriptor: (5S)-5-({4-[(6-methoxy-1-methyl-1H-benzimidazol-2-yl)methoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
Authors:Bruning, J.B, Rajapaksha, H, Wegener, K, Bhatia, H.
Deposit date:2016-12-06
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:X-ray crystal structure of rivoglitazone bound to PPAR gamma and PPAR subtype selectivity of TZDs.
Biochim. Biophys. Acta, 1861, 2017
5TOI
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BU of 5toi by Molmil
Crystal Structure of the Marburg Virus VP35 Oligomerization Domain P4222
Descriptor: Polymerase cofactor VP35
Authors:Bruhn, J.F, Tickle, I.J, Bricogne, G, Saphire, E.O.
Deposit date:2016-10-17
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal Structure of the Marburg Virus VP35 Oligomerization Domain.
J. Virol., 91, 2017
7W6Z
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BU of 7w6z by Molmil
Crystal structure of Kangiella koreensis RseP orthologue in complex with batimastat in space group P21
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, ZINC ION, Zinc metalloprotease
Authors:Imaizumi, Y, Takanuki, K, Nogi, T.
Deposit date:2021-12-02
Release date:2022-09-07
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
7KQO
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BU of 7kqo by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain (P43 crystal form)
Descriptor: Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-11-17
Release date:2020-12-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
7W70
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BU of 7w70 by Molmil
Crystal structure of the PDZ-C domain fragment of Kangiella koreensis RseP orthologue
Descriptor: Zinc metalloprotease
Authors:Miyoshi, K, Nogi, T.
Deposit date:2021-12-02
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
7W6X
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BU of 7w6x by Molmil
Crystal structure of E. coli RseP in complex with batimastat
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, Regulator of sigma-E protease RseP, ZINC ION
Authors:Takanuki, K, Imaizumi, Y, Nogi, T.
Deposit date:2021-12-02
Release date:2022-09-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
7W6Y
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BU of 7w6y by Molmil
Crystal structure of Kangiella koreensis RseP orthologue in complex with batimastat in space group P1
Descriptor: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, Anti sigma-E protein, RseA, ...
Authors:Imaizumi, Y, Takanuki, K, Nogi, T.
Deposit date:2021-12-02
Release date:2022-09-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
5UAE
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BU of 5uae by Molmil
Crystal structure of the coiled-coil domain from Listeria Innocua Phage Integrase (Trigonal Form)
Descriptor: CITRATE ANION, Putative integrase
Authors:Gupta, K, Sharp, R, Yuan, J.B, Van Duyne, G.D.
Deposit date:2016-12-19
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Coiled-coil interactions mediate serine integrase directionality.
Nucleic Acids Res., 45, 2017
5UDO
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BU of 5udo by Molmil
Crystal structure of the coiled-coil domain from Listeria Innocua Phage Integrase (Tetragonal Form II)
Descriptor: A118 serine integrase
Authors:Gupta, K, Yuan, J.B, Sharp, R, Van Duyne, G.D.
Deposit date:2016-12-28
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.541 Å)
Cite:Coiled-coil interactions mediate serine integrase directionality.
Nucleic Acids Res., 45, 2017
7W6M
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BU of 7w6m by Molmil
Cryo-EM map of PEDV (Pintung 52) S protein with all three protomers in the D0-down conformation determined in situ on intact viral particles.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hsu, S.T.D, Draczkowski, P, Wang, Y.S.
Deposit date:2021-12-02
Release date:2022-08-03
Last modified:2022-09-14
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:In situ structure and dynamics of an alphacoronavirus spike protein by cryo-ET and cryo-EM.
Nat Commun, 13, 2022
5U9I
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BU of 5u9i by Molmil
Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) complexed with S-farnesyl-L-cysteine methyl ester
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1), FARNESYL
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-16
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7W73
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BU of 7w73 by Molmil
Cryo-EM map of PEDV S protein with one protomer in the D0-up conformation while the other two in the D0-down conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hsu, S.T.D, Draczkowski, P, Wang, Y.S.
Deposit date:2021-12-03
Release date:2022-08-03
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:In situ structure and dynamics of an alphacoronavirus spike protein by cryo-ET and cryo-EM.
Nat Commun, 13, 2022
5U1H
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BU of 5u1h by Molmil
Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa
Descriptor: (2R,6S)-2-amino-6-(carboxyamino)-7-{[(1R)-1-carboxyethyl]amino}-7-oxoheptanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Watanabe, N, Stogios, P.J, Skarina, T, Wawrzak, Z, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-11-28
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa
To be published
7VZS
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BU of 7vzs by Molmil
FAD-dpendent Glucose Dehydrogenase complexed with an inhibitor at pH7.56
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-glucal, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Nakajima, Y.
Deposit date:2021-11-16
Release date:2022-11-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5
To Be Published
5U6R
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BU of 5u6r by Molmil
E. coli CTP synthase CC mutant filament (product-bound)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CTP synthase, CYTIDINE-5'-TRIPHOSPHATE
Authors:Kollman, J.M, Lynch, E.M.
Deposit date:2016-12-08
Release date:2017-04-26
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Human CTP synthase filament structure reveals the active enzyme conformation.
Nat. Struct. Mol. Biol., 24, 2017
5U9L
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BU of 5u9l by Molmil
Crystal structure of the intermembrane space region of the plastid division protein PARC6
Descriptor: MAGNESIUM ION, PARALOG OF ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (PARC6)
Authors:Delmar, J.D, Chou, T.H.
Deposit date:2016-12-16
Release date:2017-12-20
Method:X-RAY DIFFRACTION (2.516 Å)
Cite:Cocrystal structure of the intermembrane space region of the plastid division proteins PARC6 and PDV1
To Be Published
7VZP
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BU of 7vzp by Molmil
FAD-dpendent Glucose Dehydrogenase from Aspergillus oryzae
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GMC oxidoreductase, PENTAETHYLENE GLYCOL
Authors:Nakajima, Y.
Deposit date:2021-11-16
Release date:2022-11-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5
To Be Published
5UG7
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BU of 5ug7 by Molmil
Calcium bound Perforin C2 Domain - T431D
Descriptor: CALCIUM ION, Perforin-1
Authors:Law, R.H.P, Conroy, P.J, Voskoboinik, I, Whisstock, J.C.
Deposit date:2017-01-07
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Perforin proteostasis is regulated through its C2 domain: supra-physiological cell death mediated by T431D-perforin.
Cell Death Differ., 25, 2018
7W1Q
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BU of 7w1q by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complexed with 2'-O-methylguanosine
Descriptor: Guanosine deaminase, O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
7L04
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BU of 7l04 by Molmil
Crystal Structure of Adeno-Associated Virus Porcine Origin capsid protein in complex with Importin-alpha 2
Descriptor: Importin subunit alpha-1, VP1
Authors:Hoad, M, Forwood, J.
Deposit date:2020-12-11
Release date:2021-02-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal Structure of Adeno-Associated Virus Porcine Origin capsid protein in complex with Importin-alpha 2
To Be Published
5TR5
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BU of 5tr5 by Molmil
Solution structure of Serine 65 phosphorylated UBL domain from parkin
Descriptor: E3 ubiquitin-protein ligase parkin
Authors:Aguirre, J.D, Dunkerley, K.M, Mercier, P, Shaw, G.S.
Deposit date:2016-10-25
Release date:2016-12-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of phosphorylated UBL domain and insights into PINK1-orchestrated parkin activation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7W9N
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BU of 7w9n by Molmil
THE STRUCTURE OF OBA33-OTA COMPLEX
Descriptor: (2~{S})-2-[[(3~{R})-5-chloranyl-3-methyl-8-oxidanyl-1-oxidanylidene-3,4-dihydroisochromen-7-yl]carbonylamino]-3-phenyl-propanoic acid, OTA DNA APTAMER (33-MER)
Authors:Xu, G.H, Li, C.G.
Deposit date:2021-12-10
Release date:2022-01-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into the Mechanism of High-Affinity Binding of Ochratoxin A by a DNA Aptamer.
J.Am.Chem.Soc., 144, 2022

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數據於2024-08-28公開中

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