PDB: 52399 resultsInfo pagesStatus searchChemie searchBIRD

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6OEF	PolyAla Model of the O-layer from the Type 4 Secretion System of H. pylori Descriptor: PolyAla Model of OMCC O-Layer Authors: Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D. Deposit date: 2019-03-27 Release date: 2019-07-03 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structure of the Helicobacter pylori Cag type IV secretion system. Elife, 8, 2019
5LDA	Structure of deubiquitinating enzyme homolog (Pyrococcus furiosus JAMM1) in complex with ubiquitin-like SAMP2. Descriptor: GLYCEROL, JAMM1, SAMP2, ... Authors: Cao, S, Engilberge, S, Girard, E, Gabel, F, Franzetti, B, Maupin-Furlow, J.A. Deposit date: 2016-06-24 Release date: 2017-06-21 Last modified: 2022-03-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases. Structure, 25, 2017
5FTH	Crystal structure of the GluA2 K738M-T744K LBD in complex with glutamate (zinc form) Descriptor: GLUTAMATE RECEPTOR 2, GLUTAMIC ACID, ZINC ION Authors: Nayeem, N, Green, T. Deposit date: 2016-01-13 Release date: 2016-02-03 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Distinct Structural Pathways Coordinate the Activation of Ampa Receptor-Auxiliary Subunit Complexes. Neuron, 89, 2016
1XIU	Crystal structure of the agonist-bound ligand-binding domain of Biomphalaria glabrata RXR Descriptor: (9cis)-retinoic acid, Nuclear receptor coactivator 1, RXR-like protein Authors: De Groot, A, De Rosny, E, Juillan-Binard, C, Ferrer, J.-L, Laudet, V, Pebay-Peroula, E, Fontecilla-Camps, J.-C, Borel, F. Deposit date: 2004-09-22 Release date: 2005-09-13 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure of a Novel Tetrameric Complex of Agonist-bound Ligand-binding Domain of Biomphalaria glabrata Retinoid X Receptor. J.Mol.Biol., 354, 2005
3B6Q	Crystal Structure of the GLUR2 Ligand Binding Core (S1S2J) Mutant T686A in Complex with Glutamate at 2.0 Resolution Descriptor: GLUTAMIC ACID, Glutamate receptor 2, SULFATE ION Authors: Cho, Y, Lolis, E, Howe, J.R. Deposit date: 2007-10-29 Release date: 2008-02-05 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and single-channel results indicate that the rates of ligand binding domain closing and opening directly impact AMPA receptor gating. J.Neurosci., 28, 2008
3B6W	Crystal Structure of the GLUR2 Ligand Binding Core (S1S2J) T686S Mutant in Complex with Glutamate at 1.7 Resolution Descriptor: GLUTAMIC ACID, Glutamate receptor 2, SULFATE ION Authors: Cho, Y, Lolis, E, Howe, J.R. Deposit date: 2007-10-29 Release date: 2008-02-05 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural and single-channel results indicate that the rates of ligand binding domain closing and opening directly impact AMPA receptor gating. J.Neurosci., 28, 2008
2CRI	Solution structure of the MSP domain of mouse VAMP-associated proteinA Descriptor: Vesicle-associated membrane protein-associated protein A Authors: Endo, H, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2005-05-20 Release date: 2005-11-20 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the MSP domain of mouse VAMP-associated proteinA To be published
5V6Y	Crystal structure of the human CLR:RAMP1 extracellular domain heterodimer with bound high-affinity and altered selectivity adrenomedullin variant Descriptor: ADM, Maltose-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose Authors: Pioszak, A, Booe, J. Deposit date: 2017-03-17 Release date: 2018-01-31 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Probing the Mechanism of Receptor Activity-Modifying Protein Modulation of GPCR Ligand Selectivity through Rational Design of Potent Adrenomedullin and Calcitonin Gene-Related Peptide Antagonists. Mol. Pharmacol., 93, 2018
5VHX	GluA2-1xGSG1L bound to ZK Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2,Germ cell-specific gene 1-like protein, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid Authors: Twomey, E.C, Yelshanskaya, M.V, Grassucci, R.A, Frank, J, Sobolevsky, A.I. Deposit date: 2017-04-13 Release date: 2017-05-03 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (8.3 Å) Cite: Structural Bases of Desensitization in AMPA Receptor-Auxiliary Subunit Complexes. Neuron, 94, 2017
1FTJ	CRYSTAL STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J) IN COMPLEX WITH GLUTAMATE AT 1.9 RESOLUTION Descriptor: GLUTAMATE RECEPTOR SUBUNIT 2, GLUTAMIC ACID, ZINC ION Authors: Armstrong, N, Gouaux, E. Deposit date: 2000-09-12 Release date: 2000-11-01 Last modified: 2018-01-31 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: crystal structures of the GluR2 ligand binding core. Neuron, 28, 2000
1FW0	CRYSTAL STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J) IN COMPLEX WITH KAINATE AT 2.0 A RESOLUTION Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, GLUTAMATE RECEPTOR SUBUNIT 2 Authors: Armstrong, N, Gouaux, E. Deposit date: 2000-09-20 Release date: 2000-11-15 Last modified: 2017-08-02 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: crystal structures of the GluR2 ligand binding core. Neuron, 28, 2000
1FTO	CRYSTAL STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J) IN THE APO STATE AT 2.0 A RESOLUTION Descriptor: GLUTAMATE RECEPTOR SUBUNIT 2 Authors: Armstrong, N, Gouaux, E. Deposit date: 2000-09-12 Release date: 2000-11-01 Last modified: 2017-08-02 Method: X-RAY DIFFRACTION (2 Å) Cite: Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: crystal structures of the GluR2 ligand binding core. Neuron, 28, 2000
1FTL	CRYSTAL STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J) IN COMPLEX WITH THE ANTAGONIST DNQX AT 1.8 A RESOLUTION Descriptor: 6,7-DINITROQUINOXALINE-2,3-DIONE, GLUTAMATE RECEPTOR SUBUNIT 2, SULFATE ION Authors: Armstrong, N, Gouaux, E. Deposit date: 2000-09-12 Release date: 2000-11-01 Last modified: 2017-08-02 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: crystal structures of the GluR2 ligand binding core. Neuron, 28, 2000
2CHQ	Replication Factor C ADPNP complex Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, REPLICATION FACTOR C SMALL SUBUNIT Authors: Seybert, A, Singleton, M.R, Cook, N, Hall, D.R, Wigley, D.B. Deposit date: 2006-03-16 Release date: 2006-06-06 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Communication between Subunits within an Archaeal Clamp-Loader Complex. Embo J., 25, 2006
3TAL	Crystal structure of NurA with manganese Descriptor: DNA double-strand break repair protein nurA, GLYCEROL, MANGANESE (II) ION Authors: Chae, J, Kim, Y.C, Cho, Y. Deposit date: 2011-08-04 Release date: 2011-11-23 Last modified: 2013-07-03 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Crystal structure of the NurA-dAMP-Mn2+ complex Nucleic Acids Res., 40, 2012
5F35	Structure of quinolinate synthase in complex with citrate Descriptor: CITRATE ANION, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2015-12-02 Release date: 2016-08-31 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
5F3D	Structure of quinolinate synthase in complex with reaction intermediate W Descriptor: 2-IMINO,3-CARBOXY,5-OXO,6-HYDROXY HEXANOIC ACID, IRON/SULFUR CLUSTER, Quinolinate synthase A, ... Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2015-12-02 Release date: 2016-08-31 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
5F33	Structure of quinolinate synthase in complex with phosphoglycolohydroxamate Descriptor: IRON/SULFUR CLUSTER, PHOSPHOGLYCOLOHYDROXAMIC ACID, Quinolinate synthase A, ... Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2015-12-02 Release date: 2016-09-07 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
4ISU	Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with the antagonist (2R)-IKM-159 at 2.3A resolution. Descriptor: (4aS,5aR,6R,8aS,8bS)-5a-(carboxymethyl)-8-oxo-2,4a,5a,6,7,8,8a,8b-octahydro-1H-pyrrolo[3',4':4,5]furo[3,2-b]pyridine-6-carboxylic acid, CHLORIDE ION, Glutamate receptor 2, ... Authors: Juknaite, L, Frydenvang, K, Kastrup, J.S. Deposit date: 2013-01-17 Release date: 2013-03-20 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Studies on an (S)-2-amino-3-(3-hydroxy-5-methyl-4-isoxazolyl)propionic acid (AMPA) receptor antagonist IKM-159: asymmetric synthesis, neuroactivity, and structural characterization. J.Med.Chem., 56, 2013
6F48	Structure of quinolinate synthase with reaction intermediates X and Y Descriptor: 2-imino,3-carboxy,5-hydroxy,6-oxo hexanoic acid, 5-hydroxy,-4,5-dihydroquinolinate, CHLORIDE ION, ... Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2017-11-29 Release date: 2018-04-25 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystallographic Trapping of Reaction Intermediates in Quinolinic Acid Synthesis by NadA. ACS Chem. Biol., 13, 2018
2B3X	Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1) Descriptor: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, Iron-responsive element binding protein 1, ... Authors: Dupuy, J, Fontecilla-Camps, J.C, Volbeda, A. Deposit date: 2005-09-22 Release date: 2006-01-10 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.54 Å) Cite: Crystal structure of human iron regulatory protein 1 as cytosolic aconitase Structure, 14, 2006
1X3M	Crystal structure of ADP bound Propionate kinase (TdcD) from Salmonella typhimurium Descriptor: ADENOSINE-5'-DIPHOSPHATE, Propionate kinase Authors: Simanshu, D.K, Savithri, H.S, Murthy, M.R. Deposit date: 2005-05-09 Release date: 2005-09-27 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structures of ADP and AMPPNP-bound Propionate Kinase (TdcD) from Salmonella typhimurium: Comparison with Members of Acetate and Sugar Kinase/Heat Shock Cognate 70/Actin Superfamily. J.Mol.Biol., 352, 2005
1BUZ	SOLUTION STRUCTURE OF SPOIIAA, A PHOSPHORYLATABLE COMPONENT OF THE SYSTEM THAT REGULATES TRANSCRIPTION FACTOR SIGMA-F OF BACILLUS SUBTILIS NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: SPOIIAA Authors: Kovacs, H, Comfort, D, Lord, M, Campbell, I.D, Yudkin, M.D. Deposit date: 1997-09-08 Release date: 1998-07-01 Last modified: 2024-04-10 Method: SOLUTION NMR Cite: Solution structure of SpoIIAA, a phosphorylatable component of the system that regulates transcription factor sigmaF of Bacillus subtilis. Proc.Natl.Acad.Sci.USA, 95, 1998
3TAI	Crystal structure of NurA Descriptor: DNA double-strand break repair protein nurA, GLYCEROL Authors: Chae, J, Kim, Y.C, Cho, Y. Deposit date: 2011-08-04 Release date: 2011-11-23 Last modified: 2013-07-03 Method: X-RAY DIFFRACTION (2.82 Å) Cite: Crystal structure of the NurA-dAMP-Mn2+ complex Nucleic Acids Res., 40, 2012
6F4L	Structure of quinolinate synthase with inhibitor-derived quinolinate Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, IRON/SULFUR CLUSTER, ... Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2017-11-29 Release date: 2018-04-25 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystallographic Trapping of Reaction Intermediates in Quinolinic Acid Synthesis by NadA. ACS Chem. Biol., 13, 2018

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