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6FTB
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BU of 6ftb by Molmil
Staphylococcus aureus monofunctional glycosyltransferase in complex with moenomycin
Descriptor: (2R)-2,3-dihydroxypropyl dodecanoate, 1,2-ETHANEDIOL, MOENOMYCIN, ...
Authors:Punekar, A.S, Dowson, C.J, Roper, D.I.
Deposit date:2018-02-20
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerization.
Cell Surf, 2, 2018
6PI3
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BU of 6pi3 by Molmil
NMR Solution structure of native tachyplesin III peptide
Descriptor: Tachyplesin-3
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-25
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
6GAY
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BU of 6gay by Molmil
A fast recovering full-length LOV protein (DsLOV) from the marine phototrophic bacterium Dinoroseobacter shibae (Dark state) - M49I mutant
Descriptor: FLAVIN MONONUCLEOTIDE, Putative blue-light photoreceptor, SULFATE ION
Authors:Granzin, J, Batra-Safferling, R, Roellen, K.
Deposit date:2018-04-13
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanistic Basis of the Fast Dark Recovery of the Short LOV Protein DsLOV from Dinoroseobacter shibae.
Biochemistry, 57, 2018
6PIO
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BU of 6pio by Molmil
NMR Solution structure of cyclic tachyplesin II
Descriptor: Tachyplesin-2
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-26
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
6PIN
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BU of 6pin by Molmil
NMR Solution structure of cyclic tachyplesin I
Descriptor: Tachyplesin-1
Authors:Harvey, P.J, Troeira Henriques, S, Vernen, F.
Deposit date:2019-06-26
Release date:2019-09-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of Tachyplesin Peptides and Their Cyclized Analogues to Improve Antimicrobial and Anticancer Properties.
Int J Mol Sci, 20, 2019
6FU1
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BU of 6fu1 by Molmil
Crystal structure of Schistosoma mansoni HDAC8 complexed with a n-alkyl hydroxamate
Descriptor: GLYCEROL, Histone deacetylase, POTASSIUM ION, ...
Authors:Marek, M, Shaik, T.B, Romier, C.
Deposit date:2018-02-26
Release date:2019-03-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.548 Å)
Cite:A Novel Class of Schistosoma mansoni Histone Deacetylase 8 (HDAC8) Inhibitors Identified by Structure-Based Virtual Screening and In Vitro Testing.
Molecules, 23, 2018
5EKB
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BU of 5ekb by Molmil
R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (reconstituted in solution)
Descriptor: FE (III) ION, MANGANESE (III) ION, PALMITIC ACID, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2015-11-03
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.074 Å)
Cite:Divergent assembly mechanisms of the manganese/iron cofactors in R2lox and R2c proteins.
J.Inorg.Biochem., 162, 2016
6GC2
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BU of 6gc2 by Molmil
AbLIFT: Antibody stability and affinity optimization by computational design of the variable light-heavy chain interface
Descriptor: Heavy chain, Light Chain
Authors:Warszawski, S, Katz, A, Khmelnitsky, L, Ben Nissan, G, Javitt, G, Dym, O, Unger, T, Knop, O, Diskin, R, Albeck, S, Fass, D, Sharon, M, Fleishman, S.J.
Deposit date:2018-04-17
Release date:2019-05-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Optimizing antibody affinity and stability by the automated design of the variable light-heavy chain interfaces.
Plos Comput.Biol., 15, 2019
6FUN
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BU of 6fun by Molmil
F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Human F11 T-Cell Receptor alpha chain, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-27
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
4RXO
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BU of 4rxo by Molmil
The structure of GTP-bound SAMHD1
Descriptor: Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, ...
Authors:Zhu, C.F, Wei, W, Peng, X, Dong, Y.H, Gong, Y, Yu, X.F.
Deposit date:2014-12-11
Release date:2015-03-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The mechanism of substrate-controlled allosteric regulation of SAMHD1 activated by GTP.
Acta Crystallogr.,Sect.D, 71, 2015
4RNR
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BU of 4rnr by Molmil
Crystal structure of broadly neutralizing anti-HIV antibody PGT130
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PGT130 Heavy Chain, PGT130 Light Chain
Authors:Kong, L, Wilson, I.A.
Deposit date:2014-10-24
Release date:2014-11-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.758 Å)
Cite:Two Classes of Broadly Neutralizing Antibodies within a Single Lineage Directed to the High-Mannose Patch of HIV Envelope.
J.Virol., 89, 2015
6M18
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BU of 6m18 by Molmil
ACE2-B0AT1 complex
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R.H, Zhang, Y.Y, Li, Y.N, Xia, L, Zhou, Q.
Deposit date:2020-02-25
Release date:2020-03-11
Last modified:2020-11-04
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2.
Science, 367, 2020
6M1D
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BU of 6m1d by Molmil
ACE2-B0AT1 complex, open conformation
Descriptor: Angiotensin-converting enzyme 2, Sodium-dependent neutral amino acid transporter B(0)AT1
Authors:Yan, R.H, Zhang, Y.Y, Li, Y.N, Xia, L, Zhou, Q.
Deposit date:2020-02-25
Release date:2020-03-11
Last modified:2020-04-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2.
Science, 367, 2020
6M2A
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BU of 6m2a by Molmil
A non-His-rich type of chimeric sirohydrochlorin nickelochelatase CfbA from M. jannaschii and M. barkeri
Descriptor: SULFATE ION, Sirohydrochlorin cobaltochelatase,Sirohydrochlorin cobaltochelatase,Sirohydrochlorin cobaltochelatase
Authors:Fujishiro, T.
Deposit date:2020-02-26
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:The nickel-sirohydrochlorin formation mechanism of the ancestral class II chelatase CfbA in coenzyme F430 biosynthesis.
Chem Sci, 12, 2021
8WBY
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BU of 8wby by Molmil
Cryo-EM structure of ACE2-B0AT1 complex with JX98
Descriptor: 2-(4-chloranyl-3,5-dimethyl-phenoxy)-~{N}-propan-2-yl-ethanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R, Hu, Z, Dai, L.
Deposit date:2023-09-10
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Molecular basis of inhibition of the amino acid transporter B 0 AT1 (SLC6A19).
Nat Commun, 15, 2024
5EMO
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BU of 5emo by Molmil
Structure of the star domain of T-STAR in complex with AUUAAA RNA
Descriptor: KH domain-containing, RNA-binding, signal transduction-associated protein 3, ...
Authors:Dominguez, C, Feracci, M.
Deposit date:2015-11-06
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Structural basis of RNA recognition and dimerization by the STAR proteins T-STAR and Sam68.
Nat Commun, 7, 2016
8WGM
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BU of 8wgm by Molmil
Quadruple mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS V1/S, N51I+C59R+S108N+I164L) complexed with LA1, NADPH and dUMP
Descriptor: (3~{E})-3-[[2-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]oxypropoxy]phenyl]methylidene]oxolan-2-one, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Vanichtanankul, J, Saeyang, T, Vitsupakorn, D, Arwon, U, Decharuangsilp, S, Yuthavong, Y, Kamchonwongpaisan, S.
Deposit date:2023-09-22
Release date:2024-09-11
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Flexible 2,4-diaminopyrimidine bearing a butyrolactone as Plasmodium falciparum dihydrofolate reductase inhibitors.
Bioorg.Chem., 153, 2024
6Q1Z
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BU of 6q1z by Molmil
Crystal structure of human 1G04 Fab in complex with influenza virus neuraminidase from A/Hunan/02650/2016 (H7N9)
Descriptor: 1G04 Fab IgG1 heavy chain, 1G04 Fab kappa light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2019-08-06
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.446 Å)
Cite:Broadly protective human antibodies that target the active site of influenza virus neuraminidase.
Science, 366, 2019
5ENK
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BU of 5enk by Molmil
Compound 18
Descriptor: (4~{S},6~{S})-4-[2,4-bis(fluoranyl)-5-pyrimidin-5-yl-phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine, Beta-secretase 1, GLYCEROL, ...
Authors:Lewis, H.A.
Deposit date:2015-11-09
Release date:2016-07-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Targeting the BACE1 Active Site Flap Leads to a Potent Inhibitor That Elicits Robust Brain A beta Reduction in Rodents.
Acs Med.Chem.Lett., 7, 2016
4S25
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BU of 4s25 by Molmil
Crystal structure of Arabidopsis thaliana ThiC with bound imidazole ribonucleotide, S-adenosylhomocysteine, Fe4S4 cluster and Zn (trigonal crystal form)
Descriptor: 1,4-BUTANEDIOL, 1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole, CHLORIDE ION, ...
Authors:Fenwick, M.K, Mehta, A.P, Zhang, Y, Abdelwahed, S, Begley, T.P, Ealick, S.E.
Deposit date:2015-01-19
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Non-canonical active site architecture of the radical SAM thiamin pyrimidine synthase.
Nat Commun, 6
6M7H
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BU of 6m7h by Molmil
Structure of calmodulin with KN93
Descriptor: CALCIUM ION, Calmodulin-1, N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide
Authors:Damo, S.M, Pattanayek, R, Johnson, C.N.
Deposit date:2018-08-20
Release date:2019-08-28
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The CaMKII inhibitor KN93-calmodulin interaction and implications for calmodulin tuning of NaV1.5 and RyR2 function.
Cell Calcium, 82, 2019
6FYG
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BU of 6fyg by Molmil
The crystal structure of EncM V135T mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8WBZ
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BU of 8wbz by Molmil
Cryo-EM structure of ACE2-B0AT1 complex with JX225
Descriptor: 2-(4-bromanyl-3-methyl-phenoxy)-~{N}-propyl-ethanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R, Hu, Z, Dai, L.
Deposit date:2023-09-10
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular basis of inhibition of the amino acid transporter B 0 AT1 (SLC6A19).
Nat Commun, 15, 2024
6FZ5
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BU of 6fz5 by Molmil
Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound
Descriptor: 4-[3-[(8~{a}~{R})-3,4,6,7,8,8~{a}-hexahydro-1~{H}-pyrrolo[1,2-a]pyrazin-2-yl]propyl]-2,6-bis(chloranyl)-~{N}-methyl-~{N}-(1,3,5-trimethylpyrazol-4-yl)benzenesulfonamide, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Kersten, F.C, Brenk, R.
Deposit date:2018-03-14
Release date:2019-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 63, 2020
6FNQ
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BU of 6fnq by Molmil
Ergothioneine-biosynthetic methyltransferase EgtD in complex with N,N,N-trimethylhistidine (hercynine)
Descriptor: GLYCEROL, Histidine N-alpha-methyltransferase, MAGNESIUM ION, ...
Authors:Vit, A, Blankenfeldt, W, Seebeck, F.P.
Deposit date:2018-02-05
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018

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數據於2024-10-02公開中

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