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2DVM
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NAD complex structure of PH1275 protein from Pyrococcus horikoshii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 439aa long hypothetical malate oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Lokanath, N.K, Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-31
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:NAD complex structure of PH1275 protein from Pyrococcus horikoshii
To be Published
2DVN
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BU of 2dvn by Molmil
Structure of PH1917 protein with the complex of IMP from Pyrococcus horikoshii
Descriptor: GLYCEROL, Hypothetical protein PH1917, INOSINIC ACID, ...
Authors:Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-31
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
J.Mol.Biol., 375, 2008
2DVO
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BU of 2dvo by Molmil
Structure of PH1917 protein with the complex of ITP from Pyrococcus horikoshii
Descriptor: Hypothetical protein PH1917, INOSINE 5'-TRIPHOSPHATE, SODIUM ION
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-31
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
J.Mol.Biol., 375, 2008
2DVP
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Structure of NTPase from Pyroccous horikoshii
Descriptor: Hypothetical protein PH1917
Authors:Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-31
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
J.Mol.Biol., 375, 2008
2DVQ
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BU of 2dvq by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: Bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DVR
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BU of 2dvr by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DVS
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BU of 2dvs by Molmil
Crystal structure analysis of the N-terminal bromodomain of human BRD2 complexed with acetylated histone H4 peptide
Descriptor: bromodomain-containing protein 2, histone H4
Authors:Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Acetylated Histone H4 Recognition by the Human BRD2 Bromodomain.
J.Biol.Chem., 285, 2010
2DVT
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BU of 2dvt by Molmil
Crystal Structure of 2,6-Dihydroxybenzoate Decarboxylase from Rhizobium
Descriptor: Thermophilic reversible gamma-resorcylate decarboxylase, ZINC ION
Authors:Goto, M.
Deposit date:2006-08-01
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Nonoxidative Zn-Dependent 2,6-Dihydroxybenzoate (gamma-Resorcylate) Decarboxylase from Rhizobium sp. Strain MTP-10005
To be Published
2DVU
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BU of 2dvu by Molmil
Crystal Structure of 2,6-Dihydroxybenzoate Decarboxylase Complexed with 2,6-Dihydroxybenzoate
Descriptor: 2,6-DIHYDROXYBENZOIC ACID, Thermophilic reversible gamma-resorcylate decarboxylase, ZINC ION
Authors:Goto, M.
Deposit date:2006-08-01
Release date:2006-09-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of Nonoxidative Zn-Dependent 2,6-Dihydroxybenzoate (gamma-Resorcylate) Decarboxylase from Rhizobium sp. Strain MTP-10005
To be Published
2DVV
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BU of 2dvv by Molmil
Crystal structure of the second bromodomain of the human Brd2 protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bromodomain-containing protein 2
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-08-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the second bromodomain of the human Brd2 protein
To be Published
2DVW
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BU of 2dvw by Molmil
Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
Descriptor: 26S protease regulatory subunit 6B, 26S proteasome non-ATPase regulatory subunit 10
Authors:Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-01
Release date:2007-03-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
Structure, 15, 2007
2DVX
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Crystal Structure of 2,6-Dihydroxybenzoate Decarboxylase Complexed with inhibitor 2,3-dihydroxybenzaldehyde
Descriptor: 2,3-DIHYDROXYBENZALDEHYDE, Thermophilic reversible gamma-resorcylate decarboxylase, ZINC ION
Authors:Goto, M.
Deposit date:2006-08-01
Release date:2006-09-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Nonoxidative Zn-Dependent 2,6-Dihydroxybenzoate (gamma-Resorcylate) Decarboxylase from Rhizobium sp. Strain MTP-10005
To be Published
2DVY
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BU of 2dvy by Molmil
Crystal structure of restriction endonucleases PabI
Descriptor: Restriction endonuclease PabI
Authors:Miyazono, K, Watanabe, M, Kamo, M, Sawasaki, T, Nagata, K, Endo, Y, Tanokura, M, Kobayashi, I.
Deposit date:2006-08-01
Release date:2007-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Novel protein fold discovered in the PabI family of restriction enzymes
Nucleic Acids Res., 35, 2007
2DVZ
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BU of 2dvz by Molmil
Structure of a periplasmic transporter
Descriptor: CADMIUM ION, GLUTAMIC ACID, Putative exported protein
Authors:Huvent, I, Belrhali, H, Antoine, R, Bompard, C, Locht, C, Jacob-Dubuisson, F, Villeret, V.
Deposit date:2006-08-01
Release date:2006-11-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of Bordetella pertussis BugE solute receptor in a bound conformation
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2DW0
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BU of 2dw0 by Molmil
Crystal structure of VAP2 from Crotalus atrox venom (Form 2-1 crystal)
Descriptor: 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ...
Authors:Takeda, S, Igarashi, T, Araki, S.
Deposit date:2006-08-02
Release date:2007-07-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins
Febs Lett., 581, 2007
2DW1
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BU of 2dw1 by Molmil
Crystal structure of VAP2 from Crotalus atrox venom (Form 2-2 crystal)
Descriptor: 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ...
Authors:Takeda, S, Igarashi, T, Araki, S.
Deposit date:2006-08-02
Release date:2007-07-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins
Febs Lett., 581, 2007
2DW2
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BU of 2dw2 by Molmil
Crystal structure of VAP2 from Crotalus atrox venom (Form 2-5 crystal)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)][2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Catrocollastatin, ...
Authors:Takeda, S, Igarashi, T, Araki, S.
Deposit date:2006-08-02
Release date:2007-07-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins
Febs Lett., 581, 2007
2DW3
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BU of 2dw3 by Molmil
Solution structure of the Rhodobacter sphaeroides PufX membrane protein
Descriptor: Intrinsic membrane protein pufX
Authors:Wang, Z.Y.
Deposit date:2006-08-02
Release date:2007-06-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Rhodobacter sphaeroides PufX membrane protein: implications for the quinone exchange and protein-protein interactions
Biochemistry, 46, 2007
2DW4
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BU of 2dw4 by Molmil
Crystal structure of human LSD1 at 2.3 A resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1
Authors:Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-02
Release date:2007-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of histone demethylase LSD1 and tranylcypromine at 2.25A
Biochem.Biophys.Res.Commun., 366, 2008
2DW5
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BU of 2dw5 by Molmil
Crystal structure of human peptidylarginine deiminase 4 in complex with N-alpha-benzoyl-N5-(2-fluoro-1-iminoethyl)-L-ornithine amide
Descriptor: CALCIUM ION, N-[(1S)-1-(AMINOCARBONYL)-4-(ETHANIMIDOYLAMINO)BUTYL]BENZAMIDE, Protein-arginine deiminase type-4, ...
Authors:Luo, Y, Arita, K, Sato, M, Thompson, P.R.
Deposit date:2006-08-04
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibitors and Inactivators of Protein Arginine Deiminase 4: Functional and Structural Characterization
Biochemistry, 45, 2006
2DW6
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Crystal structure of the mutant K184A of D-Tartrate Dehydratase from Bradyrhizobium japonicum complexed with Mg++ and D-tartrate
Descriptor: Bll6730 protein, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ...
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2006-08-07
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
2DW7
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Crystal structure of D-tartrate dehydratase from Bradyrhizobium japonicum complexed with Mg++ and meso-tartrate
Descriptor: Bll6730 protein, MAGNESIUM ION, S,R MESO-TARTARIC ACID
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2006-08-07
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
2DWA
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Structure of the complex of lactoferrin C-terminal half with fucose at 2.07 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Singh, N, Sinha, M, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2006-08-09
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure of the complex of lactoferrin C-terminal half with fucose at 2.07 A resolution
To be Published
2DWB
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BU of 2dwb by Molmil
Aurora-A kinase complexed with AMPPNP
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION, Serine/threonine-protein kinase 6
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-10
Release date:2007-07-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Aurora-A kinase complexed with AMPPNP
To be Published
2DWC
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Crystal structure of Probable phosphoribosylglycinamide formyl transferase from Pyrococcus horikoshii OT3 complexed with ADP
Descriptor: 433aa long hypothetical phosphoribosylglycinamide formyl transferase, ADENOSINE-5'-DIPHOSPHATE, SULFATE ION
Authors:Yoshikawa, S, Arai, R, Kamo-Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-10
Release date:2007-02-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Probable phosphoribosylglycinamide formyl transferase from Pyrococcus horikoshii OT3 complexed with ADP
To be Published

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數據於2024-09-04公開中

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