Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1FM4
DownloadVisualize
BU of 1fm4 by Molmil
CRYSTAL STRUCTURE OF THE BIRCH POLLEN ALLERGEN BET V 1L
Descriptor: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, MAJOR POLLEN ALLERGEN BET V 1-L
Authors:Markovic-Housley, Z, Degano, M, Lamba, D, von Roepenack-Lahaye, E, Clemens, S, Susani, M, Ferreira, F, Scheiner, O, Breiteneder, H.
Deposit date:2000-08-16
Release date:2002-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal Structure of a Hypoallergenic Isoform of the Major Birch Pollen Allergen Bet v 1 and its Likely Biological Function as a Plant Steroid Carrier
J.Mol.Biol., 325, 2003
9GFW
DownloadVisualize
BU of 9gfw by Molmil
HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH 4-methylphenyl-boronic acid at pH 7.4
Descriptor: (4-methylphenyl)-tris(oxidanyl)boron, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:Alterio, V, De Simone, G, Esposito, D.
Deposit date:2024-08-12
Release date:2024-11-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Exploring the binding mode of phenyl and vinyl boronic acids to human carbonic anhydrases.
Int.J.Biol.Macromol., 282, 2024
9GFX
DownloadVisualize
BU of 9gfx by Molmil
Huma Carbonic anhydrase II in complex with trans-2-phenylvinylboronic acid
Descriptor: Carbonic anhydrase 2, GLYCEROL, ZINC ION, ...
Authors:Alterio, V, De Simone, G, Esposito, D.
Deposit date:2024-08-12
Release date:2024-11-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Exploring the binding mode of phenyl and vinyl boronic acids to human carbonic anhydrases.
Int.J.Biol.Macromol., 282, 2024
9GFV
DownloadVisualize
BU of 9gfv by Molmil
HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH 4-methylphenyl-boronic acid
Descriptor: (4-methylphenyl)-tris(oxidanyl)boron, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Alterio, v, De Simone, G, Esposito, D.
Deposit date:2024-08-12
Release date:2024-11-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Exploring the binding mode of phenyl and vinyl boronic acids to human carbonic anhydrases.
Int.J.Biol.Macromol., 282, 2024
2X11
DownloadVisualize
BU of 2x11 by Molmil
Crystal structure of the complete EphA2 ectodomain in complex with ephrin A5 receptor binding domain
Descriptor: EPHRIN TYPE-A RECEPTOR 2, EPHRIN-A5
Authors:Seiradake, E, Harlos, K, Sutton, G, Aricescu, A.R, Jones, E.Y.
Deposit date:2009-12-21
Release date:2010-03-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (4.83 Å)
Cite:An Extracellular Steric Seeding Mechanism for Eph-Ephrin Signalling Platform Assembly
Nat.Struct.Mol.Biol., 17, 2010
1KVX
DownloadVisualize
BU of 1kvx by Molmil
CARBOXYLIC ESTER HYDROLASE, SINGLE MUTANT D99A OF BOVINE PANCREATIC PLA2, 1.9 A ORTHORHOMBIC FORM
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Sundaralingam, M.
Deposit date:1998-04-28
Release date:1998-11-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the catalytic site mutants D99A and H48Q and the calcium-loop mutant D49E of phospholipase A2.
Acta Crystallogr.,Sect.D, 55, 1999
3F2P
DownloadVisualize
BU of 3f2p by Molmil
Thermolysin inhibition
Descriptor: 3-methyl-2-(propanoyloxy)benzoic acid, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Englert, L, Heine, A, Klebe, G.
Deposit date:2008-10-30
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment-Based Lead Discovery: Screening and Optimizing Fragments for Thermolysin Inhibition.
Chemmedchem, 5, 2010
1R88
DownloadVisualize
BU of 1r88 by Molmil
The crystal structure of Mycobacterium tuberculosis MPT51 (FbpC1)
Descriptor: MPT51/MPB51 antigen
Authors:Wilson, R.A, Maughan, W.N, Kremer, L, Besra, G.S, Futterer, K.
Deposit date:2003-10-23
Release date:2003-12-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The structure of Mycobacterium tuberculosis MPT51 (FbpC1) defines a new family of non-catalytic alpha/beta hydrolases.
J.Mol.Biol., 335, 2004
4JB0
DownloadVisualize
BU of 4jb0 by Molmil
Rhodopseudomonas palustris (strain CGA009) Rp1789 transport protein
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, GLYCEROL, ...
Authors:Salmon, R.
Deposit date:2013-02-19
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The CouPSTU and TarPQM Transporters in Rhodopseudomonas palustris: Redundant, Promiscuous Uptake Systems for Lignin-Derived Aromatic Substrates.
Plos One, 8, 2013
5NC9
DownloadVisualize
BU of 5nc9 by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with (2S)-2,6-diamino-N-hydroxyhexanamide
Descriptor: (2~{S})-2,6-bis(azanyl)-~{N}-oxidanyl-hexanamide, 1,2-ETHANEDIOL, CITRIC ACID, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2017-03-03
Release date:2018-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
8WZK
DownloadVisualize
BU of 8wzk by Molmil
Human erythrocyte catalase
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yadav, S, Vinothkumar, K.R.
Deposit date:2023-11-01
Release date:2024-07-10
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8WZM
DownloadVisualize
BU of 8wzm by Molmil
Human erythrocyte catalase with CTAB as additive during EM sample preparation
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yadav, S, Vinothkumar, K.R.
Deposit date:2023-11-02
Release date:2024-07-10
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8WZH
DownloadVisualize
BU of 8wzh by Molmil
Human erythrocyte catalase with SLS as additive during cryo-EM grid preparation
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yadav, S, Vinothkumar, K.R.
Deposit date:2023-11-01
Release date:2024-07-10
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8WZJ
DownloadVisualize
BU of 8wzj by Molmil
Human erythrocyte catalase
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Yadav, S, Vinothkumar, K.R.
Deposit date:2023-11-01
Release date:2024-07-10
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
1N87
DownloadVisualize
BU of 1n87 by Molmil
Solution structure of the U-box of Prp19
Descriptor: Pre-mRNA splicing factor PRP19
Authors:Chazin, W.J, Ohi, M.D, Vander Kooi, C.W.
Deposit date:2002-11-19
Release date:2003-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural insights into the U-box, a domain associated with multi-ubiquitination
Nat.Struct.Biol., 10, 2003
2P8B
DownloadVisualize
BU of 2p8b by Molmil
Crystal structure of N-succinyl Arg/Lys racemase from Bacillus cereus ATCC 14579 complexed with N-succinyl Lys.
Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme family protein, N-SUCCINYL LYSINE
Authors:Fedorov, A.A, Song, L, Fedorov, E.V, Gerlt, J.A, Almo, S.C.
Deposit date:2007-03-22
Release date:2007-07-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Prediction and assignment of function for a divergent N-succinyl amino acid racemase.
Nat.Chem.Biol., 3, 2007
8TPX
DownloadVisualize
BU of 8tpx by Molmil
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: trans-oriented 1B2 and ACP
Descriptor: Antibody Fragment 1B2, Heavy Chain, Light Chain, ...
Authors:Cogan, D.P, Soohoo, A.M, Chen, M, Brodsky, K.L, Liu, Y, Khosla, C.
Deposit date:2023-08-05
Release date:2024-08-07
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for intermodular communication in assembly-line polyketide biosynthesis.
Nat.Chem.Biol., 21, 2025
2ZS0
DownloadVisualize
BU of 2zs0 by Molmil
Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin
Descriptor: CALCIUM ION, CHLORIDE ION, Extracellular giant hemoglobin major globin subunit A1, ...
Authors:Numoto, N, Nakagawa, T, Kita, A, Sasayama, Y, Fukumori, Y, Miki, K.
Deposit date:2008-09-02
Release date:2008-10-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin
Biochemistry, 47, 2008
8CL9
DownloadVisualize
BU of 8cl9 by Molmil
Tubulin-DARPin D1 complex
Descriptor: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wranik, M, Bertrand, Q, Weinert, T, Kepa, M.W, Steinmetz, M, Standfuss, J.
Deposit date:2023-02-16
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A multi-reservoir extruder for time-resolved serial protein crystallography and compound screening at X-ray free-electron lasers.
Nat Commun, 14, 2023
8TPW
DownloadVisualize
BU of 8tpw by Molmil
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: cis-oriented 1B2 and ACP
Descriptor: Antibody Fragment 1B2, Heavy Chain, Light Chain, ...
Authors:Cogan, D.P, Soohoo, A.M, Chen, M, Brodsky, K.L, Liu, Y, Khosla, C.
Deposit date:2023-08-05
Release date:2024-08-07
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural basis for intermodular communication in assembly-line polyketide biosynthesis.
Nat.Chem.Biol., 21, 2025
8FDX
DownloadVisualize
BU of 8fdx by Molmil
AGF271 and GAR in complex with human recombinant GARFTase, ligase, purine biosynthesis, transfers formyl group from 10-formyl tetrahydrofolate to glycinamide ribonucleotide (GAR) to form tetrahydrofolate and formyl GAR
Descriptor: GLYCINAMIDE RIBONUCLEOTIDE, N-{4-[3-(2-amino-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidin-6-yl)propyl]thiophene-2-carbonyl}-L-glutamic acid, Trifunctional purine biosynthetic protein adenosine-3
Authors:Nyman, M.C, Wong-Roushar, J, Dann III, C.E.
Deposit date:2022-12-05
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Multitargeted 6-Substituted Thieno[2,3- d ]pyrimidines as Folate Receptor-Selective Anticancer Agents that Inhibit Cytosolic and Mitochondrial One-Carbon Metabolism.
Acs Pharmacol Transl Sci, 6, 2023
4YW2
DownloadVisualize
BU of 4yw2 by Molmil
Crystal Structure of Streptococcus pneumoniae NanC, complex 6'SL
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Owen, C.D, Lukacik, P, Potter, J.A, Walsh, M, Taylor, G.L.
Deposit date:2015-03-20
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Streptococcus pneumoniae NanC: STRUCTURAL INSIGHTS INTO THE SPECIFICITY AND MECHANISM OF A SIALIDASE THAT PRODUCES A SIALIDASE INHIBITOR.
J.Biol.Chem., 290, 2015
6ZI7
DownloadVisualize
BU of 6zi7 by Molmil
Crystal structure of OleP-oleandolide(DEO) bound to L-rhamnose
Descriptor: (3~{R},4~{S},5~{R},6~{S},7~{S},9~{S},11~{R},12~{S},13~{R},14~{R})-3,5,7,9,11,13,14-heptamethyl-4,6,12-tris(oxidanyl)-1-oxacyclotetradecane-2,10-dione, Cytochrome P-450, FORMIC ACID, ...
Authors:Montemiglio, L.C, Savino, C, Vallone, B, Parisi, G, Freda, I.
Deposit date:2020-06-25
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Biomolecules, 10, 2020
1Q66
DownloadVisualize
BU of 1q66 by Molmil
CRYSTAL STRUCTURE OF TGT IN COMPLEX WITH 2-AMINO-6-AMINOMETHYL-8-phenylsulfanylmethyl-3H-QUINAZOLIN-4-ONE crystallized at pH 5.5
Descriptor: 2-AMINO-6-AMINOMETHYL-8-PHENYLSULFANYLMETHYL-3H-QUINAZOLIN-4-ONE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Meyer, E, Reuter, K, Stubbs, M.T, Garcia, G.A, Klebe, G.
Deposit date:2003-08-12
Release date:2004-04-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic Study of Inhibitors of tRNA-guanine Transglycosylase Suggests a New Structure-based Pharmacophore for Virtual Screening.
J.Mol.Biol., 338, 2004
8CMK
DownloadVisualize
BU of 8cmk by Molmil
Transportin-3 TNPO3 in complex with RSY region of CIRBP
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, Cold-inducible RNA-binding protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Q, Sagmeister, T, Pavkov-Keller, T, Madl, T.
Deposit date:2023-02-20
Release date:2024-03-06
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (2.945 Å)
Cite:Structural basis of phosphorylation-independent nuclear import of CIRBP by TNPO3.
Nat Commun, 16, 2025

239149

數據於2025-07-23公開中

PDB statisticsPDBj update infoContact PDBjnumon