Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8XJ3
DownloadVisualize
BU of 8xj3 by Molmil
Crystal structure of methyltransferase CbiL from Akkermansia muciniphila
Descriptor: CbiL
Authors:Guo, S, Jiang, M, Wang, M.
Deposit date:2023-12-20
Release date:2024-06-05
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of methyltransferase CbiL from Akkermansia muciniphila.
Biochem.Biophys.Res.Commun., 722, 2024
9F9A
DownloadVisualize
BU of 9f9a by Molmil
Crystal structure of MUS81-EME1 bound by compound 12.
Descriptor: 2-naphthalen-2-yl-5-oxidanyl-6-oxidanylidene-1H-pyrimidine-4-carboxylic acid, Crossover junction endonuclease EME1, Crossover junction endonuclease MUS81, ...
Authors:Collie, G.W.
Deposit date:2024-05-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.911 Å)
Cite:Fragment-Based Discovery of Novel MUS81 Inhibitors.
Acs Med.Chem.Lett., 15, 2024
9G5Z
DownloadVisualize
BU of 9g5z by Molmil
Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
Descriptor: CHLORIDE ION, Endoribonuclease MazF, GLYCEROL, ...
Authors:Prolic-Kalinsek, M, Haesaerts, S, Loris, R.
Deposit date:2024-07-17
Release date:2024-07-24
Method:X-RAY DIFFRACTION (3.42909384 Å)
Cite:Staphylococcus aureus MazF in complex with Nanobody 11
To Be Published
8YB5
DownloadVisualize
BU of 8yb5 by Molmil
SARS-CoV-2 DMV nsp3-4 pore complex (consensus-pore, C6 symmetry)
Descriptor: Non-structural protein 4, Papain-like protease nsp3
Authors:Huang, Y.X, Zhong, L.J, Zhang, W.X, Ni, T.
Deposit date:2024-02-11
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Molecular Architecture of Coronavirus Double Membrane Vesicle Pore Complex
To Be Published
8ZAK
DownloadVisualize
BU of 8zak by Molmil
Crystal structure of the channel protein CorA from Campylobacter jejuni in complex with Ni2+
Descriptor: Magnesium transport protein CorA, NICKEL (II) ION, SULFATE ION
Authors:Ahn, S.Y, Yoon, S.I.
Deposit date:2024-04-25
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and biochemical analysis of the unique interactions of the Campylobacter jejuni CorA channel protein with divalent cations.
Biochem.Biophys.Res.Commun., 723, 2024
8ZX6
DownloadVisualize
BU of 8zx6 by Molmil
Heparin bound Tau fibril PHF
Descriptor: Isoform Tau-F of Microtubule-associated protein tau
Authors:Tao, Y.Q, Liu, C, Li, D.
Deposit date:2024-06-13
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Heparin bound Tau fibril PHF
To Be Published
9BRZ
DownloadVisualize
BU of 9brz by Molmil
V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
Deposit date:2024-05-12
Release date:2024-06-19
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 631, 2024
8ZNC
DownloadVisualize
BU of 8znc by Molmil
Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH, AKG in the steady stage of reaction
Descriptor: 2-OXOGLUTARIC ACID, AMMONIUM ION, Glutamate dehydrogenase, ...
Authors:Wakabayashi, T, Nakasako, M.
Deposit date:2024-05-26
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Mechanism for drastic reduction in catalytic activity of Trp89Phe-mutated glutamate dehydrogenase revealed by crystal structure and cryoEM-sampling of metastable conformation in action
To Be Published
1EQN
DownloadVisualize
BU of 1eqn by Molmil
E.COLI PRIMASE CATALYTIC CORE
Descriptor: DNA PRIMASE
Authors:Podobnik, M, McInerney, P, O'Donnell, M, Kuriyan, J.
Deposit date:2000-04-05
Release date:2000-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A TOPRIM domain in the crystal structure of the catalytic core of Escherichia coli primase confirms a structural link to DNA topoisomerases.
J.Mol.Biol., 300, 2000
1EUA
DownloadVisualize
BU of 1eua by Molmil
SCHIFF BASE INTERMEDIATE IN KDPG ALDOLASE FROM ESCHERICHIA COLI
Descriptor: ACETATE ION, KDPG ALDOLASE, PYRUVIC ACID, ...
Authors:Allard, J, Grochulski, P, Sygusch, J.
Deposit date:2000-04-14
Release date:2001-02-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Covalent intermediate trapped in 2-keto-3-deoxy-6- phosphogluconate (KDPG) aldolase structure at 1.95-A resolution.
Proc.Natl.Acad.Sci.USA, 98, 2001
1EUC
DownloadVisualize
BU of 1euc by Molmil
CRYSTAL STRUCTURE OF DEPHOSPHORYLATED PIG HEART, GTP-SPECIFIC SUCCINYL-COA SYNTHETASE
Descriptor: PHOSPHATE ION, SUCCINYL-COA SYNTHETASE, ALPHA CHAIN, ...
Authors:Fraser, M.E, James, M.N.G, Bridger, W.A, Wolodko, W.T.
Deposit date:2000-04-14
Release date:2000-07-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phosphorylated and dephosphorylated structures of pig heart, GTP-specific succinyl-CoA synthetase.
J.Mol.Biol., 299, 2000
1EC9
DownloadVisualize
BU of 1ec9 by Molmil
E. COLI GLUCARATE DEHYDRATASE BOUND TO XYLAROHYDROXAMATE
Descriptor: GLUCARATE DEHYDRATASE, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Gulick, A.M, Hubbard, B.K, Gerlt, J.A, Rayment, I.
Deposit date:2000-01-25
Release date:2000-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: crystallographic and mutagenesis studies of the reaction catalyzed by D-glucarate dehydratase from Escherichia coli.
Biochemistry, 39, 2000
1EEZ
DownloadVisualize
BU of 1eez by Molmil
Crystal Structure Determination of HLA-A2.1 Complexed to GP2 Peptide Variant(I2L/V5L)
Descriptor: BETA-2-MICROGLOBULIN (LIGHT CHAIN), GP2 PEPTIDE, HLA-A2.1 MHC CLASS I (HEAVY CHAIN)
Authors:Sharma, A.K, Kuhns, J.J, Collins, E.J.
Deposit date:2000-02-04
Release date:2003-06-10
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Class I major histocompatibility complex anchor substitutions alter the conformation of T cell receptor contacts.
J.Biol.Chem., 276, 2001
1EI7
DownloadVisualize
BU of 1ei7 by Molmil
TMV COAT PROTEIN REFINED FROM THE 4-LAYER AGGREGATE
Descriptor: COAT PROTEIN
Authors:Bhyravbhatla, B, Watowich, S.J, Caspar, D.L.
Deposit date:2000-02-24
Release date:2000-04-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Refined atomic model of the four-layer aggregate of the tobacco mosaic virus coat protein at 2.4-A resolution.
Biophys.J., 74, 1998
1EL2
DownloadVisualize
BU of 1el2 by Molmil
SOLUTION STRUCTURE OF A MODIFIED HUMAN TELOMERE FRAGMENT (STRUCTURE "A")
Descriptor: 5'-D(*CP*CP*CP*TP*AP*AP*(5CM)P*CP*CP*TP*AP*AP*CP*CP*CP*UP*AP*AP*CP*CP*CP*T)-3'
Authors:Phan, A.T, Gueron, M, Leroy, J.-L.
Deposit date:2000-03-13
Release date:2000-03-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure and internal motions of a fragment of the cytidine-rich strand of the human telomere.
J.Mol.Biol., 299, 2000
1EVG
DownloadVisualize
BU of 1evg by Molmil
CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI WITH UNMODIFIED CATALYTIC CYSTEINE
Descriptor: SULFATE ION, THYMIDYLATE SYNTHASE
Authors:Phan, J, Mahdavian, E, Nivens, M.C, Minor, W, Berger, S, Spencer, H.T, Dunlap, R.B, Lebioda, L.
Deposit date:2000-04-19
Release date:2000-05-03
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalytic cysteine of thymidylate synthase is activated upon substrate binding.
Biochemistry, 39, 2000
1EN1
DownloadVisualize
BU of 1en1 by Molmil
STRUCTURE OF THE HIV-1 MINUS STRAND PRIMER BINDING SITE
Descriptor: DNA (5'-D(P*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3')
Authors:Johnson, P.E, Turner, R.B, Wu, Z.R, Levin, J.G, Summers, M.F.
Deposit date:2000-03-20
Release date:2000-04-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A mechanism for plus-strand transfer enhancement by the HIV-1 nucleocapsid protein during reverse transcription
Biochemistry, 39, 2000
1EV2
DownloadVisualize
BU of 1ev2 by Molmil
CRYSTAL STRUCTURE OF FGF2 IN COMPLEX WITH THE EXTRACELLULAR LIGAND BINDING DOMAIN OF FGF RECEPTOR 2 (FGFR2)
Descriptor: PROTEIN (FIBROBLAST GROWTH FACTOR 2), PROTEIN (FIBROBLAST GROWTH FACTOR RECEPTOR 2), SULFATE ION
Authors:Plotnikov, A.N, Hubbard, S.R, Schlessinger, J, Mohammadi, M.
Deposit date:2000-04-19
Release date:2000-05-31
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of two FGF-FGFR complexes reveal the determinants of ligand-receptor specificity.
Cell(Cambridge,Mass.), 101, 2000
1EGD
DownloadVisualize
BU of 1egd by Molmil
STRUCTURE OF T255E, E376G MUTANT OF HUMAN MEDIUM CHAIN ACYL-COA DEHYDROGENASE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MEDIUM CHAIN ACYL-COA DEHYDROGENASE
Authors:Lee, H.J, Wang, M, Paschke, R, Nandy, A, Ghisla, S, Kim, J.P.
Deposit date:1996-04-11
Release date:1997-06-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the wild type and the Glu376Gly/Thr255Glu mutant of human medium-chain acyl-CoA dehydrogenase: influence of the location of the catalytic base on substrate specificity.
Biochemistry, 35, 1996
1EGC
DownloadVisualize
BU of 1egc by Molmil
STRUCTURE OF T255E, E376G MUTANT OF HUMAN MEDIUM CHAIN ACYL-COA DEHYDROGENASE COMPLEXED WITH OCTANOYL-COA
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MEDIUM CHAIN ACYL-COA DEHYDROGENASE, OCTANOYL-COENZYME A
Authors:Lee, H.J, Wang, M, Paschke, R, Nandy, A, Ghisla, S, Kim, J.P.
Deposit date:1996-04-11
Release date:1997-11-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the wild type and the Glu376Gly/Thr255Glu mutant of human medium-chain acyl-CoA dehydrogenase: influence of the location of the catalytic base on substrate specificity.
Biochemistry, 35, 1996
1EFN
DownloadVisualize
BU of 1efn by Molmil
HIV-1 NEF PROTEIN IN COMPLEX WITH R96I MUTANT FYN SH3 DOMAIN
Descriptor: FYN TYROSINE KINASE, HIV-1 NEF PROTEIN, TRIMETHYL LEAD ION
Authors:Lee, C.-H, Kuriyan, J.
Deposit date:1996-06-29
Release date:1997-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the conserved core of HIV-1 Nef complexed with a Src family SH3 domain.
Cell(Cambridge,Mass.), 85, 1996
1ERD
DownloadVisualize
BU of 1erd by Molmil
THE NMR SOLUTION STRUCTURE OF THE PHEROMONE ER-2 FROM THE CILIATED PROTOZOAN EUPLOTES RAIKOVI
Descriptor: PHEROMONE ER-2
Authors:Ottiger, M, Szyperski, T, Luginbuhl, P, Ortenzi, C, Luporini, P, Bradshaw, R.A, Wuthrich, K.
Deposit date:1994-02-14
Release date:1994-10-15
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:The NMR solution structure of the pheromone Er-2 from the ciliated protozoan Euplotes raikovi.
Protein Sci., 3, 1994
1ECG
DownloadVisualize
BU of 1ecg by Molmil
DON INACTIVATED ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE
Descriptor: 5-OXO-L-NORLEUCINE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID)
Authors:Krahn, J.M.
Deposit date:1996-04-23
Release date:1996-11-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of the glutamine phosphoribosylpyrophosphate amidotransferase glutamine site and communication with the phosphoribosylpyrophosphate site.
J.Biol.Chem., 271, 1996
1ECC
DownloadVisualize
BU of 1ecc by Molmil
ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH MN-CPRPP AND 5-OXO-NORLEUCINE
Descriptor: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, 5-OXO-L-NORLEUCINE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, ...
Authors:Krahn, J.M, Smith, J.L.
Deposit date:1997-07-09
Release date:1998-04-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site.
Biochemistry, 36, 1997
1ECB
DownloadVisualize
BU of 1ecb by Molmil
ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT
Descriptor: GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION
Authors:Krahn, J.M, Smith, J.L.
Deposit date:1997-07-15
Release date:1998-04-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site.
Biochemistry, 36, 1997

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon