PDB: 73829 resultsInfo pagesStatus searchChemie searchBIRD

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3JQ4	The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidin Descriptor: 23S ribosomal RNA, 5S ribosomal RNA, N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-dihydroxy-1,4,10,19-tetramethyl-17,18-dioxo-16-oxabicyclo[13.2.2]nonadeca-3,5,9,11-tetraen-2-yl]-2-oxopropanamide Authors: Auerbach-Nevo, T, Mermershtain, I, Davidovich, C, Bashan, A, Rozenberg, H, Yonath, A. Deposit date: 2009-09-06 Release date: 2010-09-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.52 Å) Cite: The structure of ribosome-lankacidin complex reveals ribosomal sites for synergistic antibiotics Proc.Natl.Acad.Sci.USA, 107, 2010
1K8G	Crystal Structure of the N-terminal domain of Oxytricha nova telomere end binding protein alpha subunit both uncomplexed and complexed with telomeric ssDNA Descriptor: 5'-D(TP*TP*GP*GP*GP*G)-3', SULFATE ION, Telomere-Binding Protein alpha Subunit Authors: Classen, S, Ruggles, J.A, Schultz, S.C. Deposit date: 2001-10-24 Release date: 2001-12-20 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of the N-terminal domain of Oxytricha nova telomere end-binding protein alpha subunit both uncomplexed and complexed with telomeric ssDNA. J.Mol.Biol., 314, 2001
3AU5	Structure of the human myosin-X MyTH4-FERM cassette Descriptor: Myosin-X Authors: Hirano, Y, Takahashi, A, Hakoshima, T. Deposit date: 2011-01-28 Release date: 2011-07-13 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural basis of cargo recognition by the myosin-X MyTH4-FERM domain Embo J., 30, 2011
3RVD	Crystal structure of the binary complex, obtained by soaking, of photosyntetic a4 glyceraldehyde 3-phosphate dehydrogenase (gapdh) with cp12-2, both from arabidopsis thaliana. Descriptor: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: Fermani, S, Thumiger, A, Falini, G, Marri, L, Sparla, F, Trost, P. Deposit date: 2011-05-06 Release date: 2012-04-25 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Conformational Selection and Folding-upon-binding of Intrinsically Disordered Protein CP12 Regulate Photosynthetic Enzymes Assembly. J.Biol.Chem., 287, 2012
3AU4	Structure of the human myosin-X MyTH4-FERM cassette bound to its specific cargo, DCC Descriptor: Myosin-X, Netrin receptor DCC Authors: Hirano, Y, Hatano, T, Hakoshima, T. Deposit date: 2011-01-28 Release date: 2011-07-13 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis of cargo recognition by the myosin-X MyTH4-FERM domain Embo J., 30, 2011
1Q89	Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (cubic crystal form) Descriptor: 39 kDa initiator binding protein Authors: Schumacher, M.A, Johnson, P.J. Deposit date: 2003-08-20 Release date: 2003-11-18 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Structural Basis of Core Promoter Recognition in a Primitive Eukaryote Cell(Cambridge,Mass.), 115, 2003
1Q88	Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (monoclinic form) Descriptor: 39 kDa initiator binding protein Authors: Schumacher, M.A, Johnson, P.J. Deposit date: 2003-08-20 Release date: 2003-11-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.42 Å) Cite: Structural Basis of Core Promoter Recognition in a Primitive Eukaryote Cell(Cambridge,Mass.), 115, 2003
1Q87	Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (tetragonal form) Descriptor: 39 kDa initiator binding protein Authors: Schumacher, M.A, Johnson, P.J. Deposit date: 2003-08-20 Release date: 2003-11-18 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.32 Å) Cite: Structural Basis of Core Promoter Recognition in a Primitive Eukaryote Cell(Cambridge,Mass.), 115, 2003
2FCC	Crystal Structure of T4 Pyrimidine Dimer Glycosylase (T4-Pdg) Covalently Complexed with a DNA Substrate Containing Abasic Site Descriptor: DNA (5'-D(*CP*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*(BRU)P*(BRU)P*CP*AP*(BRU)P*CP*CP*(BRU)P*GP*G)-3'), Endonuclease V, ... Authors: Golan, G, Zharkov, D.O, Fernandes, A.S, Dodson, M.L, McCullough, A.K, Grollman, A.P, Lloyd, R.S, Shoham, G. Deposit date: 2005-12-12 Release date: 2006-10-03 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure of T4 Pyrimidine Dimer Glycosylase in a Reduced Imine Covalent Complex with Abasic Site-containing DNA. J.Mol.Biol., 362, 2006
3GDF	Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum. Descriptor: Probable NADP-dependent mannitol dehydrogenase, ZINC ION Authors: Nuess, D, Goettig, P, Magler, I, Denk, U, Breitenbach, M, Schneider, P.B, Brandstetter, H, Simon-Nobbe, B. Deposit date: 2009-02-24 Release date: 2010-05-26 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum: Implications for oligomerisation and catalysis. Biochimie, 92, 2010
5J43	CdiA-CT from uropathogenic Escherichia coli in complex with CysK Descriptor: Cysteine synthase A, tRNA nuclease CdiA Authors: Morse, R.P, Goulding, C.W, Johnson, P.M. Deposit date: 2016-03-31 Release date: 2016-07-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Unraveling the essential role of CysK in CDI toxin activation. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2QKM	The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex Descriptor: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein Authors: She, M, Song, H. Deposit date: 2007-07-11 Release date: 2008-04-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural basis of dcp2 recognition and activation by dcp1. Mol.Cell, 29, 2008
6WRZ	Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 with 7-methyl-GpppA and S-adenosyl-L-homocysteine in the Active Site and Sulfates in the mRNA Binding Groove. Descriptor: 2'-O-methyltransferase, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... Authors: Minasov, G, Shuvalova, L, Rosas-Lemus, M, Brunzelle, J.S, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2020-04-30 Release date: 2020-05-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.25 Å) Cite: High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design. Sci.Signal., 13, 2020
4ENC	Crystal structure of fluoride riboswitch Descriptor: FLUORIDE ION, Fluoride riboswitch, MAGNESIUM ION, ... Authors: Ren, A.M, Rajashankar, K.R, Patel, D.J. Deposit date: 2012-04-12 Release date: 2012-05-09 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.272 Å) Cite: Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch. Nature, 486, 2012
4FXE	Crystal structure of the intact E. coli RelBE toxin-antitoxin complex Descriptor: Antitoxin RelB, SULFATE ION, mRNA interferase RelE Authors: Brodersen, D.E, Boggild, A, Sofos, N. Deposit date: 2012-07-03 Release date: 2012-08-29 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.7503 Å) Cite: The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity. Structure, 20, 2012
5TWJ	Crystal Structure of RlmH in Complex with S-Adenosylmethionine Descriptor: Ribosomal RNA large subunit methyltransferase H, S-ADENOSYLMETHIONINE Authors: Koh, C.S, Madireddy, R, Beane, T.J, Zamore, P.D, Korostelev, A.A. Deposit date: 2016-11-14 Release date: 2017-05-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.299 Å) Cite: Small methyltransferase RlmH assembles a composite active site to methylate a ribosomal pseudouridine. Sci Rep, 7, 2017
3IQR	SAM-I riboswitch from T. tencongensis variant A94G bound with SAM Descriptor: BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I riboswitch Authors: Montange, R.K, Batey, R.T. Deposit date: 2009-08-20 Release date: 2010-08-04 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Free state conformational sampling of the SAM-I riboswitch aptamer domain. Structure, 18, 2010
3EAR	Novel dimerization motif in the DEAD box RNA helicase Hera: form 1, partial dimer Descriptor: Hera Authors: Klostermeier, D, Rudolph, M.G. Deposit date: 2008-08-26 Release date: 2008-12-09 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility. Nucleic Acids Res., 37, 2009
3IQN	Free-state structural transitions of the SAM-I riboswitch Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ... Authors: Montange, R.K, Batey, R.T. Deposit date: 2009-08-20 Release date: 2010-08-04 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Free state conformational sampling of the SAM-I riboswitch aptamer domain. Structure, 18, 2010
3IQP	SAM-I riboswitch from T. tencongensis variant A94G apo form Descriptor: BARIUM ION, SAM-I riboswitch Authors: Montange, R.K, Batey, R.T. Deposit date: 2009-08-20 Release date: 2010-08-04 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Free state conformational sampling of the SAM-I riboswitch aptamer domain. Structure, 18, 2010
1UET	Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure Descriptor: ACETATE ION, CALCIUM ION, MAGNESIUM ION, ... Authors: Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-05-21 Release date: 2003-12-02 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Divergent evolutions of trinucleotide polymerization revealed by an archaeal CCA-adding enzyme structure. Embo J., 22, 2003
3EAS	Novel dimerization motif in the DEAD box RNA helicase Hera: form 1, complete dimer, asymmetric Descriptor: Hera Authors: Klostermeier, D, Rudolph, M.G. Deposit date: 2008-08-26 Release date: 2008-12-09 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility. Nucleic Acids Res., 37, 2009
3IYO	Cryo-EM model of virion-sized HEV virion-sized capsid Descriptor: Capsid protein Authors: Xing, L, Mayazaki, N, Li, T.C, Simons, M.N, Wall, J.S, Moore, M, Wang, C.Y, Takeda, N, Wakita, T, Miyamura, T, Cheng, R.H. Deposit date: 2010-03-19 Release date: 2010-08-18 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (10.5 Å) Cite: Structural basis for the RNA-dependent assembly pathway of hepatitis E virion-sized particles J.Biol.Chem., 2010
2YIF	Crystal structure of a F. nucleatum FMN riboswitch - Free state Descriptor: FMN RIBOSWITCH, MAGNESIUM ION, POTASSIUM ION Authors: Vicens, Q, Mondragon, E, Batey, R.T. Deposit date: 2011-05-12 Release date: 2011-08-31 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.298 Å) Cite: Molecular Sensing by the Aptamer Domain of the Fmn Riboswitch: A General Model for Ligand Binding by Conformational Selection. Nucleic Acids Res., 39, 2011
3GDG	Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum. Descriptor: Probable NADP-dependent mannitol dehydrogenase, SODIUM ION Authors: Nuess, D, Goettig, P, Magler, I, Denk, U, Breitenbach, M, Schneider, P.B, Brandstetter, H, Simon-Nobbe, B. Deposit date: 2009-02-24 Release date: 2010-06-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum: Implications for oligomerisation and catalysis. Biochimie, 92, 2010

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