Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7L9I
DownloadVisualize
BU of 7l9i by Molmil
Crystal structure of human ARH3-D314A bound to magnesium and ADP-ribose
Descriptor: ADP-ribose glycohydrolase ARH3, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
Deposit date:2021-01-04
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
7L9F
DownloadVisualize
BU of 7l9f by Molmil
Crystal structure of human ARH3 bound to calcium and ADP-ribose
Descriptor: CALCIUM ION, Poly(ADP-ribose) glycohydrolase ARH3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
Deposit date:2021-01-04
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
7L9H
DownloadVisualize
BU of 7l9h by Molmil
Crystal structure of human ARH3-D77A bound to magnesium and ADP-ribose
Descriptor: ADP-ribose glycohydrolase ARH3, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Pourfarjam, Y, Kurinov, I, Moss, J, Kim, I.K.
Deposit date:2021-01-04
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical analysis of human ADP-ribosyl-acceptor hydrolase 3 reveals the basis of metal selectivity and different roles for the two magnesium ions.
J.Biol.Chem., 296, 2021
1FU9
DownloadVisualize
BU of 1fu9 by Molmil
SOLUTION STRUCTURE OF THE NINTH ZINC-FINGER DOMAIN OF THE U-SHAPED TRANSCRIPTION FACTOR
Descriptor: U-SHAPED TRANSCRIPTIONAL COFACTOR, ZINC ION
Authors:Liew, C.K, Kowalski, K, Fox, A.H, Newton, A, Sharpe, B.K, Crossley, M, Mackay, J.P.
Deposit date:2000-09-14
Release date:2000-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of two CCHC zinc fingers from the FOG family protein U-shaped that mediate protein-protein interactions.
Structure Fold.Des., 8, 2000
1TFB
DownloadVisualize
BU of 1tfb by Molmil
NMR STUDIES OF HUMAN GENERAL TRANSCRIPTION FACTOR TFIIB: DYNAMICS AND INTERACTION WITH VP16 ACTIVATION DOMAIN, 20 STRUCTURES
Descriptor: TFIIB
Authors:Bagby, S, Ikura, M.
Deposit date:1996-11-14
Release date:1997-03-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Human general transcription factor TFIIB: conformational variability and interaction with VP16 activation domain.
Biochemistry, 37, 1998
4QHS
DownloadVisualize
BU of 4qhs by Molmil
Crystal structure of AAA+sigma 54 activator domain of the flagellar regulatory protein FlrC of Vibrio cholerae in nucleotide free state
Descriptor: 1,2-ETHANEDIOL, Flagellar regulatory protein C
Authors:Dey, S, Biswas, M, Sen, U, Dasgupta, J.
Deposit date:2014-05-29
Release date:2014-07-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unique ATPase site architecture triggers cis-mediated synchronized ATP binding in heptameric AAA+-ATPase domain of flagellar regulatory protein FlrC
J.Biol.Chem., 290, 2015
1US6
DownloadVisualize
BU of 1us6 by Molmil
Crystal structure of the quorum-sensing protein TraM from Agrobacterium tumefaciens at 1.65 Ang. resolution
Descriptor: TRANSCRIPTIONAL REPRESSOR TRAM
Authors:Vannini, A, Di Marco, S.
Deposit date:2003-11-18
Release date:2004-05-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of the Quorum-Sensing Protein Tram and its Interaction with the Transcriptional Regulator Trar
J.Biol.Chem., 279, 2004
3TOA
DownloadVisualize
BU of 3toa by Molmil
Human MOF crystal structure with active site lysine partially acetylated
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, ZINC ION, ...
Authors:Yuan, H, Ding, E.C, Marmorstein, R.
Deposit date:2011-09-04
Release date:2011-11-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:MYST protein acetyltransferase activity requires active site lysine autoacetylation.
Embo J., 31, 2011
1DCH
DownloadVisualize
BU of 1dch by Molmil
CRYSTAL STRUCTURE OF DCOH, A BIFUNCTIONAL, PROTEIN-BINDING TRANSCRIPTION COACTIVATOR
Descriptor: DCOH (DIMERIZATION COFACTOR OF HNF-1), SULFATE ION
Authors:Endrizzi, J.A, Cronk, J.D, Wang, W, Crabtree, G.R, Alber, T.
Deposit date:1995-01-24
Release date:1996-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of DCoH, a bifunctional, protein-binding transcriptional coactivator.
Science, 268, 1995
7BUL
DownloadVisualize
BU of 7bul by Molmil
Solution structure of the tandem PH and BSD1 domains of TFIIH p62
Descriptor: General transcription factor IIH subunit 1
Authors:Okuda, M, Nishimura, Y.
Deposit date:2020-04-07
Release date:2020-12-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and dynamical insights into the PH domain of p62 in human TFIIH.
Nucleic Acids Res., 49, 2021
3TOB
DownloadVisualize
BU of 3tob by Molmil
Human MOF E350Q crystal structure with active site lysine partially acetylated
Descriptor: CHLORIDE ION, ZINC ION, histone acetyltransferase MYST1
Authors:Yuan, H, Ding, E.C, Marmorstein, R.
Deposit date:2011-09-04
Release date:2011-11-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:MYST protein acetyltransferase activity requires active site lysine autoacetylation.
Embo J., 31, 2011
3H1U
DownloadVisualize
BU of 3h1u by Molmil
Structure of ubiquitin in complex with Cd ions
Descriptor: CADMIUM ION, Ubiquitin
Authors:Qureshi, I.A, Ferron, F, Cheung, P, Lescar, J.
Deposit date:2009-04-14
Release date:2009-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic structure of ubiquitin in complex with cadmium ions
BMC RES NOTES, 2, 2009
3TO9
DownloadVisualize
BU of 3to9 by Molmil
Crystal structure of yeast Esa1 E338Q HAT domain bound to coenzyme A with active site lysine acetylated
Descriptor: 1,2-ETHANEDIOL, CACODYLIC ACID, COENZYME A, ...
Authors:Yuan, H, Ding, E.C, Marmorstein, R.
Deposit date:2011-09-04
Release date:2011-11-09
Last modified:2012-01-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:MYST protein acetyltransferase activity requires active site lysine autoacetylation.
Embo J., 31, 2011
1A12
DownloadVisualize
BU of 1a12 by Molmil
REGULATOR OF CHROMOSOME CONDENSATION (RCC1) OF HUMAN
Descriptor: REGULATOR OF CHROMOSOME CONDENSATION 1
Authors:Renault, L, Nassar, N, Vetter, I, Becker, J, Roth, M, Wittinghofer, A.
Deposit date:1997-12-19
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 1.7 A crystal structure of the regulator of chromosome condensation (RCC1) reveals a seven-bladed propeller.
Nature, 392, 1998
1ENW
DownloadVisualize
BU of 1enw by Molmil
ELONGATION FACTOR TFIIS DOMAIN II
Descriptor: TRANSCRIPTION ELONGATION FACTOR S-II
Authors:Morin, P.E, Awrey, D.E, Edwards, A.M, Arrowsmith, C.H.
Deposit date:2000-03-21
Release date:2000-04-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Elongation factor TFIIS contains three structural domains: solution structure of domain II.
Proc.Natl.Acad.Sci.USA, 93, 1996
3VM8
DownloadVisualize
BU of 3vm8 by Molmil
Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface
Descriptor: Probable DNA dC->dU-editing enzyme APOBEC-3C, ZINC ION
Authors:Kitamura, S, Suzuki, A, Watanabe, N, Iwatani, Y.
Deposit date:2011-12-09
Release date:2012-10-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the human APOBEC3C having HIV-1 Vif-binding interface
To be Published
3VOX
DownloadVisualize
BU of 3vox by Molmil
X-ray Crystal Structure of Wild Type HrtR in the Apo Form
Descriptor: Transcriptional regulator
Authors:Sawai, H, Sugimoto, H, Shiro, Y, Aono, S.
Deposit date:2012-02-23
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for the Transcriptional Regulation of Heme Homeostasis in Lactococcus lactis.
J.Biol.Chem., 287, 2012
1BE4
DownloadVisualize
BU of 1be4 by Molmil
NUCLEOSIDE DIPHOSPHATE KINASE ISOFORM B FROM BOVINE RETINA
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, NUCLEOSIDE DIPHOSPHATE TRANSFERASE
Authors:Ladner, J.E, Abdulaev, N.G, Kakuev, D.L, Karaschuk, G.N, Tordova, M, Eisenstein, E, Fujiwara, J.H, Ridge, K.D, Gilliland, G.L.
Deposit date:1998-05-19
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Nucleoside diphosphate kinase from bovine retina: purification, subcellular localization, molecular cloning, and three-dimensional structure.
Biochemistry, 37, 1998
6SCF
DownloadVisualize
BU of 6scf by Molmil
A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Athukoralage, J.S, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity.
Nature, 577, 2020
5H0M
DownloadVisualize
BU of 5h0m by Molmil
Crystal structure of deep-sea thermophilic bacteriophage GVE2 HNH endonuclease with zinc ion
Descriptor: HNH endonuclease, ZINC ION
Authors:Zhang, L.K, Xu, D.D, Huang, Y.C, Gong, Y.
Deposit date:2016-10-05
Release date:2017-03-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural and functional characterization of deep-sea thermophilic bacteriophage GVE2 HNH endonuclease
Sci Rep, 7, 2017
1U35
DownloadVisualize
BU of 1u35 by Molmil
Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
Descriptor: H2A histone family, Hist1h4i protein, Histone H3.1, ...
Authors:Chakravarthy, S, Gundimella, S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
Deposit date:2004-07-20
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural characterization of the histone variant macroH2A.
Mol.Cell.Biol., 25, 2005
3VP5
DownloadVisualize
BU of 3vp5 by Molmil
X-ray Crystal Structure of Wild Type HrtR in the Holo Form
Descriptor: CACODYLATE ION, PROTOPORPHYRIN IX CONTAINING FE, Transcriptional regulator
Authors:Sawai, H, Sugimoto, H, Shiro, Y, Aono, S.
Deposit date:2012-02-23
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for the Transcriptional Regulation of Heme Homeostasis in Lactococcus lactis.
J.Biol.Chem., 287, 2012
6SX3
DownloadVisualize
BU of 6sx3 by Molmil
Intercalation of heterocyclic ligand between quartets in G-rich tetrahelical structure
Descriptor: VK2, ~{N}2,~{N}6-bis(1-methylquinolin-1-ium-3-yl)pyridine-2,6-dicarboxamide
Authors:Kotar, A, Kocman, V, Plavec, J.
Deposit date:2019-09-24
Release date:2019-12-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Intercalation of a Heterocyclic Ligand between Quartets in a G-Rich Tetrahelical Structure.
Chemistry, 26, 2020
8H7Q
DownloadVisualize
BU of 8h7q by Molmil
Cryo-EM structure of Synechocystis sp. PCC6714 Cascade at 3.8 angstrom resolution
Descriptor: CRISPR RNA, CRISPR associated protein Cas11b, CRISPR associated protein Cas5, ...
Authors:Xiao, Y, Lu, M, Yu, C, Zhang, Y.
Deposit date:2022-10-20
Release date:2023-10-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of Synechocystis sp. PCC6714 Cascade at 3.8 angstrom resolution
To Be Published
1JSP
DownloadVisualize
BU of 1jsp by Molmil
NMR Structure of CBP Bromodomain in complex with p53 peptide
Descriptor: CREB-BINDING PROTEIN, tumor protein p53
Authors:He, Y, Mujtaba, S, Zeng, L, Yan, S, Zhou, M.-M.
Deposit date:2001-08-17
Release date:2002-08-17
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural mechanism of the bromodomain of the coactivator CBP in p53 transcriptional activation.
Mol.Cell, 13, 2004

225946

数据于2024-10-09公开中

PDB statisticsPDBj update infoContact PDBjnumon