Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6LPS
DownloadVisualize
BU of 6lps by Molmil
Crystal structure of family 10 xylanase from Bacillus halodurans
Descriptor: Beta-xylanase, MAGNESIUM ION
Authors:Xiang, L, Zhang, G, Zhou, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.21357155 Å)
Cite:Crystal structure of family 10 xylanase from Bacillus halodurans
To Be Published
6LPX
DownloadVisualize
BU of 6lpx by Molmil
Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with 2-oxoglutarate (2-OG)
Descriptor: 2-OXOGLUTARIC ACID, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ...
Authors:Yang, J, Zhu, H, Ding, J.
Deposit date:2020-01-12
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations.
Cell Discov, 7, 2021
6LQE
DownloadVisualize
BU of 6lqe by Molmil
Crystal structure of Arabidopsis ARID5 PHD finger in complex with H3K4me3 peptide
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, ZINC ION
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020
6LQF
DownloadVisualize
BU of 6lqf by Molmil
Crystal structure of Arabidopsis ARID5 ARID-PHD cassette in complex with H3K4me3 peptide and DNA
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, DNA (5'-D(*TP*TP*TP*AP*GP*AP*TP*CP*TP*AP*AP*A)-3'), ...
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020
6LQJ
DownloadVisualize
BU of 6lqj by Molmil
Low resolution architecture of curli complex
Descriptor: Curli production assembly/transport component CsgF, Curli production assembly/transport component CsgG
Authors:Zhang, M, Shi, H, Huang, Y.
Deposit date:2020-01-13
Release date:2020-07-15
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Cryo-EM structure of the nonameric CsgG-CsgF complex and its implications for controlling curli biogenesis in Enterobacteriaceae.
Plos Biol., 18, 2020
6M28
DownloadVisualize
BU of 6m28 by Molmil
Sirohydrochlorin nickelochelatase CfbA in complex with Co2+
Descriptor: COBALT (II) ION, Sirohydrochlorin cobaltochelatase
Authors:Fujishiro, T.
Deposit date:2020-02-26
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:The nickel-sirohydrochlorin formation mechanism of the ancestral class II chelatase CfbA in coenzyme F430 biosynthesis.
Chem Sci, 12, 2021
6M2J
DownloadVisualize
BU of 6m2j by Molmil
Uncommon structural features of rabbit MHC class I (RLA-A1) complexed with rabbit haemorrhagic disease virus (RHDV) derived peptide, VP60-1
Descriptor: Beta-2-microglobulin, RLA class I histocompatibility antigen, alpha chain 19-1, ...
Authors:Zhang, Q.X, Liu, K.F, Yue, C, Zhang, D, Lu, D, Xiao, W.L, Liu, P.P, Zhao, Y.Z, Gao, G.L, Ding, C.M, Lyu, J.X, Liu, W.J.
Deposit date:2020-02-27
Release date:2020-07-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Strict Assembly Restriction of Peptides from Rabbit Hemorrhagic Disease Virus Presented by Rabbit Major Histocompatibility Complex Class I Molecule RLA-A1.
J.Virol., 94, 2020
6M2W
DownloadVisualize
BU of 6m2w by Molmil
Structure of RyR1 (Ca2+/Caffeine/ATP/CaM1234/CHL)
Descriptor: 5-bromanyl-N-[4-chloranyl-2-methyl-6-(methylcarbamoyl)phenyl]-2-(3-chloranylpyridin-2-yl)pyrazole-3-carboxamide, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
Authors:Ma, R, Haji-Ghassemi, O, Ma, D, Lin, L, Samurkas, A, Van Petegem, F, Yuchi, Z.
Deposit date:2020-03-01
Release date:2020-09-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for diamide modulation of ryanodine receptor.
Nat.Chem.Biol., 16, 2020
6LR3
DownloadVisualize
BU of 6lr3 by Molmil
Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum
Descriptor: Macrophage migration inhibitory factor, SULFATE ION
Authors:Su, Z.M, Tian, X.Y, Li, H.J, Wei, Z.M, Chen, L.F, Ren, H.X, Peng, W.F, Tang, C.T.
Deposit date:2020-01-15
Release date:2020-07-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural and functional insights into macrophage migration inhibitory factor from Oncomelania hupensis, the intermediate host of Schistosoma japonicum.
Biochem.J., 477, 2020
6LRC
DownloadVisualize
BU of 6lrc by Molmil
Human cGAS catalytic domain bound with the inhibitor PF-06928215
Descriptor: (1R,2S)-2-[(7-hydroxy-5-phenylpyrazolo[1,5-a]pyrimidine-3-carbonyl)amino]cyclohexane-1-carboxylic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Xu, Y.C.
Deposit date:2020-01-15
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:In Silico Screening-Based Discovery of Novel Inhibitors of Human Cyclic GMP-AMP Synthase: A Cross-Validation Study of Molecular Docking and Experimental Testing.
J.Chem.Inf.Model., 60, 2020
6LQI
DownloadVisualize
BU of 6lqi by Molmil
Cryo-EM structure of the mouse Piezo1 isoform Piezo1.1
Descriptor: Piezo-type mechanosensitive ion channel component 1
Authors:Geng, J, Liu, W, Zhou, H, Zhang, T, Wang, L, Zhang, M, Shen, B, Li, X, Xiao, B.
Deposit date:2020-01-13
Release date:2020-03-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:A Plug-and-Latch Mechanism for Gating the Mechanosensitive Piezo Channel.
Neuron, 106, 2020
6LRJ
DownloadVisualize
BU of 6lrj by Molmil
Human cGAS catalytic domain bound with compound 23
Descriptor: 4-[2-(2-methyl-[1,2,4]triazolo[1,5-c]quinazolin-5-yl)hydrazinyl]-4-oxidanylidene-butanoic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Xiong, M.Y, Yuan, X.J, Sun, H.B, Xu, Y.C.
Deposit date:2020-01-16
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:In Silico Screening-Based Discovery of Novel Inhibitors of Human Cyclic GMP-AMP Synthase: A Cross-Validation Study of Molecular Docking and Experimental Testing.
J.Chem.Inf.Model., 60, 2020
6LRL
DownloadVisualize
BU of 6lrl by Molmil
Human cGAS catalytic domain bound with compound s2
Descriptor: 3-[[5-(1,2,4-triazol-4-yl)-4H-1,2,4-triazol-3-yl]carbonylamino]benzoic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Xiong, M.Y, Yuan, X.J, Sun, H.B, Xu, Y.C.
Deposit date:2020-01-16
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.655 Å)
Cite:In Silico Screening-Based Discovery of Novel Inhibitors of Human Cyclic GMP-AMP Synthase: A Cross-Validation Study of Molecular Docking and Experimental Testing.
J.Chem.Inf.Model., 60, 2020
6LRX
DownloadVisualize
BU of 6lrx by Molmil
Marsupenaeus japonicus ferritin mutant(T158H)
Descriptor: FE (III) ION, Ferritin, NICKEL (II) ION
Authors:Zhao, G, Tan, X.
Deposit date:2020-01-16
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Converting histidine-induced 3D protein arrays in crystals into their 3D analogues in solution by metal coordination cross-linking.
Commun Chem, 2020
6LS2
DownloadVisualize
BU of 6ls2 by Molmil
Marsupenaeus japonicus ferritin mutant (T158H) pH 4.0
Descriptor: Ferritin
Authors:Zhao, G, Tan, X, Zhang, T.
Deposit date:2020-01-16
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Converting histidine-induced 3D protein arrays in crystals into their 3D analogues in solution by metal coordination cross-linking.
Commun Chem, 2020
6LS4
DownloadVisualize
BU of 6ls4 by Molmil
A novel anti-tumor agent S-40 in complex with tubulin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(4-cyclopropylphenyl)sulfonylamino]-4-methyl-N-(pyridin-3-ylmethyl)benzamide, GLYCEROL, ...
Authors:Du, T, Lin, S, Ji, M, Xue, N, Liu, Y, Zhang, K, Lu, D, Chen, X, Xu, H.
Deposit date:2020-01-17
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A novel orally active microtubule destabilizing agent S-40 targets the colchicine-binding site and shows potent antitumor activity.
Cancer Lett., 495, 2020
6LRW
DownloadVisualize
BU of 6lrw by Molmil
Marsupenaeus japonicus ferritin mutant(T158H) pH 7.0
Descriptor: Ferritin
Authors:Zhao, G, Tan, X, Zhang, T.
Deposit date:2020-01-16
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Converting histidine-induced 3D protein arrays in crystals into their 3D analogues in solution by metal coordination cross-linking.
Commun Chem, 2020
6LS1
DownloadVisualize
BU of 6ls1 by Molmil
Ribonuclease from Hericium erinaceus active and GMP binding form
Descriptor: DI(HYDROXYETHYL)ETHER, GUANOSINE, Ribonuclease T1, ...
Authors:Takebe, K, Suzuki, M, Sangawa, T, Kobayashi, H, Itagaki, T.
Deposit date:2020-01-16
Release date:2021-01-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Ribonuclease from Hericium erinaceus active and GMP binding form
To Be Published
6LS8
DownloadVisualize
BU of 6ls8 by Molmil
The monomeric structure of G80A/H81A/H82A myoglobin
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagao, S, Suda, A, Kobayashi, H, Shibata, N, Higuchi, Y, Hirota, S.
Deposit date:2020-01-17
Release date:2020-05-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Thermodynamic Control of Domain Swapping by Modulating the Helical Propensity in the Hinge Region of Myoglobin.
Chem Asian J, 15, 2020
6LSB
DownloadVisualize
BU of 6lsb by Molmil
Crystal Structure of DPF domain of MOZ in complex with H3K14bz peptide
Descriptor: Histone H3, Histone acetyltransferase KAT6A, ZINC ION
Authors:Li, H.T, Ren, X.L.
Deposit date:2020-01-17
Release date:2020-11-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Histone benzoylation serves as an epigenetic mark for DPF and YEATS family proteins.
Nucleic Acids Res., 49, 2021
6LSO
DownloadVisualize
BU of 6lso by Molmil
Crystal structure of a dimeric inhibited of peptidyl tRNA hydrolase at 1.76A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Bairagya, H.R, Ahmad, M.I, Sharma, P, Singh, T.P.
Deposit date:2020-01-17
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of a dimeric inhibited of peptidyl tRNA hydrolase at 1.76A resolution
To Be Published
6LSE
DownloadVisualize
BU of 6lse by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C3S6A/C3S6B form)
Descriptor: Genome polyprotein, PYROPHOSPHATE 2-, RNA (35-MER), ...
Authors:Wang, M, Shu, B, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSP
DownloadVisualize
BU of 6lsp by Molmil
Crystal structure of a dimeric Piptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.50 A resolution reveals an inhibited form.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Ahmad, M.I, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2020-01-18
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a dimeric Piptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.50 A resolution reveals on inhibited form.
To Be Published
6LSY
DownloadVisualize
BU of 6lsy by Molmil
AAA+ ATPase, ClpL from Streptococcus pneumoniae - ATP bound
Descriptor: ATP-dependent Clp protease, ATP-binding subunit
Authors:Kim, G, Lee, S.G, Han, S, Jung, J, Jeong, H.S, Hyun, J.K, Rhee, D.K, Kim, H.M, Lee, S.
Deposit date:2020-01-20
Release date:2021-01-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.33 Å)
Cite:ClpL is a functionally active tetradecameric AAA+ chaperone, distinct from hexameric/dodecameric ones.
Faseb J., 34, 2020
6LU7
DownloadVisualize
BU of 6lu7 by Molmil
The crystal structure of COVID-19 main protease in complex with an inhibitor N3
Descriptor: 3C-like proteinase, N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE
Authors:Liu, X, Zhang, B, Jin, Z, Yang, H, Rao, Z.
Deposit date:2020-01-26
Release date:2020-02-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure of Mprofrom SARS-CoV-2 and discovery of its inhibitors.
Nature, 582, 2020

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon