PDB: 13252 resultsInfo pagesStatus searchChemie searchBIRD

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4WSA	Crystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form) Descriptor: Influenza B vRNA promoter 3' end, Influenza B vRNA promoter 5' end, PA, ... Authors: Reich, S, Guilligay, D, Pflug, A, Cusack, S. Deposit date: 2014-10-26 Release date: 2014-11-19 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Structural insight into cap-snatching and RNA synthesis by influenza polymerase. Nature, 516, 2014
6T0S	Bat Influenza A polymerase stuttering complex using 44-mer vRNA template with intact oligo(U) sequence Descriptor: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ... Authors: Wandzik, J.M, Kouba, T, Cusack, S. Deposit date: 2019-10-03 Release date: 2020-04-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.04 Å) Cite: A Structure-Based Model for the Complete Transcription Cycle of Influenza Polymerase. Cell, 181, 2020
6T0N	Bat Influenza A polymerase pre-initiation complex Descriptor: 3' vRNA, 5' vRNA, MAGNESIUM ION, ... Authors: Wandzik, J.M, Kouba, T, Cusack, S. Deposit date: 2019-10-03 Release date: 2020-04-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (2.54 Å) Cite: A Structure-Based Model for the Complete Transcription Cycle of Influenza Polymerase. Cell, 181, 2020
5C0W	Structure of a 12-subunit nuclear exosome complex bound to single-stranded RNA substrates Descriptor: Exosome complex component CSL4, Exosome complex component MTR3, Exosome complex component RRP4, ... Authors: Makino, D.L, Conti, E. Deposit date: 2015-06-12 Release date: 2015-07-29 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (4.6 Å) Cite: RNA degradation paths in a 12-subunit nuclear exosome complex. Nature, 524, 2015
5C0X	Structure of a 12-subunit nuclear exosome complex bound to structured RNA Descriptor: Exosome complex component CSL4, Exosome complex component MTR3, Exosome complex component RRP4, ... Authors: Makino, D.L, Conti, E. Deposit date: 2015-06-12 Release date: 2015-08-05 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.812 Å) Cite: RNA degradation paths in a 12-subunit nuclear exosome complex. Nature, 524, 2015
6X50	Mfd-bound E.coli RNA polymerase elongation complex - V state Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Llewelyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-24 Release date: 2021-02-03 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
6X2N	Mfd-bound E.coli RNA polymerase elongation complex - I state Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-20 Release date: 2021-02-03 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
6X2F	Mfd-bound E.coli RNA polymerase elongation complex - L2 state Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-20 Release date: 2021-02-03 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
6X26	Mfd-bound E.coli RNA polymerase elongation complex - L1 state Descriptor: DNA (64-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-20 Release date: 2021-02-03 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
3I4N	8-oxoguanine containing RNA polymerase II elongation complex E Descriptor: DNA (5'-D(*AP*G*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP*(8OG)P*GP*CP*CP*(BRU)P*GP*GP*TP*CP*AP*TP*T)-3'), DNA (5'-D(*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*T)-3'), DNA-directed RNA polymerase II subunit RPB1, ... Authors: Damsma, G.E, Cramer, P. Deposit date: 2009-07-02 Release date: 2009-09-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.9 Å) Cite: Molecular basis of transcriptional mutagenesis at 8-oxoguanine J.Biol.Chem., 284, 2009
3I4M	8-oxoguanine containing RNA polymerase II elongation complex D Descriptor: DNA (5'-D(*AP*G*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP*(8OG)P*GP*CP*CP*(BRU)P*GP*GP*TP*CP*AP*TP*T)-3'), DNA (5'-D(*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*T)-3'), DNA-directed RNA polymerase II subunit RPB1, ... Authors: Damsma, G.E, Cramer, P. Deposit date: 2009-07-02 Release date: 2009-09-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.7 Å) Cite: Molecular basis of transcriptional mutagenesis at 8-oxoguanine J.Biol.Chem., 284, 2009
6X4W	Mfd-bound E.coli RNA polymerase elongation complex - III state Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-24 Release date: 2021-02-03 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
6X4Y	Mfd-bound E.coli RNA polymerase elongation complex - IV state Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-24 Release date: 2021-02-03 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
6X43	Mfd-bound E.coli RNA polymerase elongation complex - II state Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (64-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Llewellyn, E, Chen, J, Kang, J.Y, Darst, S.A. Deposit date: 2020-05-22 Release date: 2021-02-03 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structural basis for transcription complex disruption by the Mfd translocase. Elife, 10, 2021
6GOV	Structure of THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX Descriptor: 30S ribosomal protein S10, Antitermination protein N, DNA (I), ... Authors: Loll, B, Krupp, F, Said, N, Huang, Y, Buerger, J, Mielke, T, Spahn, C.M.T, Wahl, M.C. Deposit date: 2018-06-04 Release date: 2019-02-13 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural Basis for the Action of an All-Purpose Transcription Anti-termination Factor. Mol.Cell, 74, 2019
8TVY	Cryo-EM structure of CPD lesion containing RNA Polymerase II elongation complex with Rad26 and Elf1 (closed state) Descriptor: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ... Authors: Sarsam, R.D, Lahiri, I, Leschziner, A.E. Deposit date: 2023-08-18 Release date: 2024-01-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair. Proc.Natl.Acad.Sci.USA, 121, 2024
5MSL	Solution structure of the B. subtilis anti-sigma-F factor, FIN Descriptor: Anti-sigma-F factor Fin, ZINC ION Authors: Martinez-Lumbreras, S, Alfano, C, Isaacson, R.L. Deposit date: 2017-01-05 Release date: 2017-06-21 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: A novel RNA polymerase-binding protein that interacts with a sigma-factor docking site. Mol. Microbiol., 105, 2017
6RIC	Structure of the core Vaccinia Virus DNA-dependent RNA polymerase complex Descriptor: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ... Authors: Grimm, C, Hillen, H.S, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A, Cramer, P, Fischer, U. Deposit date: 2019-04-23 Release date: 2019-12-18 Last modified: 2019-12-25 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes. Cell, 179, 2019
6JCY	Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ECF sigma factor sigH/E Descriptor: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*T)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Li, L, Zhang, Y. Deposit date: 2019-01-30 Release date: 2019-05-29 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.106 Å) Cite: Structures and mechanism of transcription initiation by bacterial ECF factors. Nucleic Acids Res., 47, 2019
6KUR	Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1) Descriptor: 3'-vRNA, 5'-vRNA, Polymerase 3, ... Authors: Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y. Deposit date: 2019-09-02 Release date: 2019-10-02 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural insight into RNA synthesis by influenza D polymerase. Nat Microbiol, 4, 2019
6KUK	Structure of influenza D virus polymerase bound to vRNA promoter in mode A conformation (class A1) Descriptor: 3'-vRNA, 5'-vRNA, Polymerase 3, ... Authors: Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y. Deposit date: 2019-09-02 Release date: 2019-10-02 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural insight into RNA synthesis by influenza D polymerase. Nat Microbiol, 4, 2019
6KUP	Structure of influenza D virus polymerase bound to vRNA promoter in Mode A conformation(Class A2) Descriptor: 3'-vRNA, 5'-vRNA, Polymerase 3, ... Authors: Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y. Deposit date: 2019-09-02 Release date: 2019-10-02 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Structural insight into RNA synthesis by influenza D polymerase. Nat Microbiol, 4, 2019
6KUV	Structure of influenza D virus polymerase bound to cRNA promoter in class 2 Descriptor: 3'-cRNA, 5'-cRNA, Polymerase 3, ... Authors: Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y. Deposit date: 2019-09-02 Release date: 2019-10-02 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural insight into RNA synthesis by influenza D polymerase. Nat Microbiol, 4, 2019
6KUT	Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2) Descriptor: 3'-vRNA, 5'-vRNA, Polymerase 3, ... Authors: Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y. Deposit date: 2019-09-02 Release date: 2019-10-02 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural insight into RNA synthesis by influenza D polymerase. Nat Microbiol, 4, 2019
6RID	Structure of Vaccinia Virus DNA-dependent RNA polymerase elongation complex Descriptor: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ... Authors: Hillen, H.S, Bartuli, J, Grimm, C, Dienemann, C, Bedenk, K, Szalar, A, Fischer, U, Cramer, P. Deposit date: 2019-04-23 Release date: 2019-12-18 Last modified: 2019-12-25 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes. Cell, 179, 2019

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