PDB: 92212 resultsInfo pagesStatus searchChemie searchBIRD

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4PJ0	Structure of T.elongatus Photosystem II, rows of dimers crystal packing Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Hellmich, J, Bommer, M, Burkhardt, A, Ibrahim, M, Kern, J, Meents, A, Mueh, F, Dobbek, H, Zouni, A. Deposit date: 2014-05-10 Release date: 2014-10-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.437 Å) Cite: Native-like Photosystem II Superstructure at 2.44 angstrom Resolution through Detergent Extraction from the Protein Crystal. Structure, 22, 2014
2FYP	GRP94 in complex with the novel HSP90 Inhibitor Radester amine Descriptor: 2-(3-AMINO-2,5,6-TRIMETHOXYPHENYL)ETHYL 5-CHLORO-2,4-DIHYDROXYBENZOATE, Endoplasmin, PENTAETHYLENE GLYCOL, ... Authors: Immormino, R.M, Gewirth, D.T. Deposit date: 2006-02-08 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Inhibittory Ligands Adopt Different Conformations When Bound to Hsp90 or GRP94: Implications for Paralog-specific Drug Design To be Published
6T9C	Crystal structure of the complex between PPARgamma LBD and the ligand NV1346 (3a) Descriptor: 4-hexoxy-~{N}-[(2~{S})-3-methyl-1-(oxidanylamino)-1-oxidanylidene-butan-2-yl]benzamide, Peroxisome proliferator-activated receptor gamma Authors: Pochetti, G, Montanari, R, Capelli, D. Deposit date: 2019-10-27 Release date: 2020-02-26 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Insights into PPAR gamma Phosphorylation and Its Inhibition Mechanism. J.Med.Chem., 63, 2020
7F3O	Crystal structure of the GluA2o LBD in complex with glutamate and TAK-653 Descriptor: 7-(4-cyclohexyloxyphenyl)-9-methyl-4$l^{6}-thia-1$l^{4},5,8-triazabicyclo[4.4.0]deca-1(10),6,8-triene 4,4-dioxide, ACETATE ION, GLUTAMIC ACID, ... Authors: Sogabe, S, Igaki, S, Hirokawa, A, Zama, Y, Lane, W, Snell, G. Deposit date: 2021-06-16 Release date: 2021-07-28 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.44 Å) Cite: Strictly regulated agonist-dependent activation of AMPA-R is the key characteristic of TAK-653 for robust synaptic responses and cognitive improvement. Sci Rep, 11, 2021
6AOX	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with TF antigen Descriptor: Fml fimbrial adhesin FmlD, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose Authors: Kalas, V, Hultgren, S.J. Deposit date: 2017-08-16 Release date: 2018-02-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
6AS8	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside Descriptor: Fml fimbrial adhesin FmlD, ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside Authors: Kalas, V, Hultgren, S.J. Deposit date: 2017-08-23 Release date: 2018-02-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.101 Å) Cite: Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
1KBR	CRYSTAL STRUCTURE OF UNLIGATED HPPK(R92A) FROM E.COLI AT 1.55 ANGSTROM RESOLUTION Descriptor: 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE, CHLORIDE ION Authors: Blaszczyk, J, Ji, X. Deposit date: 2001-11-06 Release date: 2003-04-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Dynamic Roles of Arginine Residues 82 and 92 of Escherichia coli 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase: Crystallographic Studies Biochemistry, 42, 2003
4MSV	Crystal structure of FASL and DcR3 complex Descriptor: GLYCEROL, MAGNESIUM ION, Tumor necrosis factor ligand superfamily member 6, ... Authors: Liu, W, Ramagopal, U.A, Zhan, C, Bonanno, J.B, Bhosle, R.C, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2013-09-18 Release date: 2013-11-27 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure of the Complex of Human FasL and Its Decoy Receptor DcR3. Structure, 24, 2016
2O26	Structure of a class III RTK signaling assembly Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Kit ligand, Mast/stem cell growth factor receptor, ... Authors: Liu, H, Chen, X, Focia, P.J, He, X. Deposit date: 2006-11-29 Release date: 2007-03-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for stem cell factor-KIT signaling and activation of class III receptor tyrosine kinases. Embo J., 26, 2007
4Q13	Apo Estrogen Receptor Alpha Ligand Binding Domain D538G Mutant with a glucocorticoid receptor-interacting protein 1 NR box II peptide Descriptor: Estrogen receptor, Glucocorticoid receptor-interacting protein 1 NR box II peptide Authors: Fanning, S.W, Panchamukhi, S, Greene, G.L. Deposit date: 2014-04-02 Release date: 2015-04-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.24 Å) Cite: Estrogen receptor alpha somatic mutations Y537S and D538G confer breast cancer endocrine resistance by stabilizing the activating function-2 binding conformation. Elife, 5, 2016
2KRI	Structure of a complex between domain V of beta2-glycoprotein I and the fourth ligand-binding module from LDLR determined with Haddock Descriptor: Beta-2-glycoprotein 1, CALCIUM ION, Low-density lipoprotein receptor Authors: Beglova, N. Deposit date: 2009-12-18 Release date: 2010-03-31 Last modified: 2019-11-06 Method: SOLUTION NMR Cite: Mode of interaction between beta2GPI and lipoprotein receptors suggests mutually exclusive binding of beta2GPI to the receptors and anionic phospholipids. Structure, 18, 2010
1ZKF	Cyrstal Structure of Human Cyclophilin-A in Complex with suc-AGPF-pNA Descriptor: Peptidyl-prolyl cis-trans isomerase A, Suc-ALA-GLY-PRO-PHE-pNA Authors: Eisenmesser, E.Z, Thai, V, Pozharski, E, Kern, D. Deposit date: 2005-05-02 Release date: 2006-04-11 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Mechanistic Insights of Cyclophilin-A from X-Ray Cyrstallographic and Nuclear Magnet Resonance Investigations To be Published
1F8X	CRYSTAL STRUCTURE OF NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE Descriptor: NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE Authors: Armstrong, S.R, Cook, W.J, Short, S.A, Ealick, S.E. Deposit date: 2000-07-05 Release date: 2000-07-26 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structures of nucleoside 2-deoxyribosyltransferase in native and ligand-bound forms reveal architecture of the active site. Structure, 4, 1996
2OYP	T Cell Immunoglobulin Mucin-3 Crystal Structure Revealed a Galectin-9-independent Binding Surface Descriptor: Hepatitis A virus cellular receptor 2, SULFATE ION Authors: Cao, E, Ramagopal, U.A, Fedorov, A.A, Fedorov, E.V, Nathenson, S.G, Almo, S.C. Deposit date: 2007-02-22 Release date: 2007-04-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.952 Å) Cite: T cell immunoglobulin mucin-3 crystal structure reveals a galectin-9-independent ligand-binding surface Immunity, 26, 2007
2LB1	Structure of the second domain of human Smurf1 in complex with a human Smad1 derived peptide Descriptor: E3 ubiquitin-protein ligase SMURF1, Mothers against decapentaplegic homolog 1 Authors: Macias, M.J, Aragon, E, Goerner, N, Zaromytidou, A, Xi, Q, Escobedo, A, Massague, J. Deposit date: 2011-03-22 Release date: 2011-07-06 Last modified: 2016-04-27 Method: SOLUTION NMR Cite: A Smad action turnover switch operated by WW domain readers of a phosphoserine code. Genes Dev., 25, 2011
2P55	X-ray structure of the human mitogen-activated protein kinase kinase 1 (MEK1) in a complex with ligand and MgATP Descriptor: 2-[(4-ETHYNYL-2-FLUOROPHENYL)AMINO]-3,4-DIFLUORO-N-(2-HYDROXYETHOXY)BENZAMIDE, ADENOSINE-5'-TRIPHOSPHATE, Dual specificity mitogen-activated protein kinase kinase 1, ... Authors: Ohren, J.F, Pavlovsky, A.G. Deposit date: 2007-03-14 Release date: 2007-10-02 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: 4-anilino-5-carboxamido-2-pyridone derivatives as noncompetitive inhibitors of mitogen-activated protein kinase kinase. J.Med.Chem., 50, 2007
2PC0	Apo Wild-type HIV Protease in the open conformation Descriptor: MAGNESIUM ION, Protease, R-1,2-PROPANEDIOL Authors: Heaslet, H, Rosenfeld, R, Giffin, M.J, Elder, J.H, McRee, D.E, Stout, C.D. Deposit date: 2007-03-29 Release date: 2007-06-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Conformational flexibility in the flap domains of ligand-free HIV protease. Acta Crystallogr.,Sect.D, 63, 2007
6OCV	Solution structure of the H-NOX protein from Shewanella woodyi in the Fe(II)CO ligation state Descriptor: CARBON MONOXIDE, Heme NO binding domain protein, PROTOPORPHYRIN IX CONTAINING FE Authors: Chen, C.Y, Lee, W, Montfort, W.R. Deposit date: 2019-03-25 Release date: 2020-05-06 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051. Protein Sci., 30, 2021
1ASQ	X-RAY STRUCTURES AND MECHANISTIC IMPLICATIONS OF THREE FUNCTIONAL DERIVATIVES OF ASCORBATE OXIDASE FROM ZUCCHINI: REDUCED-, PEROXIDE-, AND AZIDE-FORMS Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBATE OXIDASE, AZIDE ION, ... Authors: Messerschmidt, A, Luecke, H, Huber, R. Deposit date: 1992-11-25 Release date: 1994-01-31 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.32 Å) Cite: X-ray structures and mechanistic implications of three functional derivatives of ascorbate oxidase from zucchini. Reduced, peroxide and azide forms. J.Mol.Biol., 230, 1993
3H1I	Stigmatellin and antimycin bound cytochrome bc1 complex from chicken Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-METHYL-BUTYRIC ACID 3-(3-FORMYLAMINO-2-HYDROXY-BENZOYLAMINO)-8-HEPTYL-2,6-DIMETHYL-4,9-DIOXO-[1,5]DIOXONAN-7-YL ESTER, CARDIOLIPIN, ... Authors: Zhang, Z, Huang, L, Shulmeister, V.M, Chi, Y.I, Kim, K.K, Hung, L.W, Crofts, A.R, Berry, E.A, Kim, S.H. Deposit date: 2009-04-12 Release date: 2009-04-28 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.53 Å) Cite: Electron Transfer by Domain Movement in Cytochrome Bc1 Nature, 392, 1998
6AB1	Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with oAzZLys Descriptor: (2S)-2-azanyl-6-[(2-azidophenyl)methoxycarbonylamino]hexanoic acid, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Yanagisawa, T, Kuratani, M, Yokoyama, S. Deposit date: 2018-07-19 Release date: 2019-04-17 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.381 Å) Cite: Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase. Cell Chem Biol, 26, 2019
1LLS	CRYSTAL STRUCTURE OF UNLIGANDED MALTOSE BINDING PROTEIN WITH XENON Descriptor: Maltose-binding periplasmic protein, XENON Authors: Rubin, S.M, Lee, S.-Y, Ruiz, E.J, Pines, A, Wemmer, D.E. Deposit date: 2002-04-30 Release date: 2002-09-18 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.8 Å) Cite: DETECTION AND CHARACTERIZATION OF XENON-BINDING SITES IN PROTEINS BY 129XE NMR SPECTROSCOPY J.MOL.BIOL., 322, 2002
1ASP	X-RAY STRUCTURES AND MECHANISTIC IMPLICATIONS OF THREE FUNCTIONAL DERIVATIVES OF ASCORBATE OXIDASE FROM ZUCCHINI: REDUCED-, PEROXIDE-, AND AZIDE-FORMS Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBATE OXIDASE, COPPER (II) ION, ... Authors: Messerschmidt, A, Luecke, H, Huber, R. Deposit date: 1992-11-25 Release date: 1994-01-31 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.59 Å) Cite: X-ray structures and mechanistic implications of three functional derivatives of ascorbate oxidase from zucchini. Reduced, peroxide and azide forms. J.Mol.Biol., 230, 1993
4C3F	Structure of Lck in complex with a compound discovered by Virtual Fragment Linking Descriptor: N-phenyl-4-(5-phenyl-1H-pyrazol-4-yl)pyrimidin-2-amine, TYROSINE-PROTEIN KINASE LCK Authors: Cowan-Jacob, S.W, Rummel, G, Stark, W. Deposit date: 2013-08-23 Release date: 2013-10-23 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.72 Å) Cite: Efficient search of chemical space: navigating from fragments to structurally diverse chemotypes. J. Med. Chem., 56, 2013
6AAZ	Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with pNO2ZLys Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, MAGNESIUM ION, ... Authors: Yanagisawa, T, Kuratani, M, Yokoyama, S. Deposit date: 2018-07-19 Release date: 2019-04-17 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.842 Å) Cite: Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase. Cell Chem Biol, 26, 2019

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