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1C3T	ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY Descriptor: PROTEIN (1D8 UBIQUITIN) Authors: Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M. Deposit date: 1999-07-28 Release date: 1999-08-20 Last modified: 2024-04-10 Method: SOLUTION NMR Cite: Rotamer strain as a determinant of protein structural specificity. Protein Sci., 8, 1999
5GOG	Lys29-linked di-ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y. Deposit date: 2016-07-27 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.977 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOK	K11/K63-branched tri-Ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y, Liu, L. Deposit date: 2016-07-27 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOB	Lys6-linked di-ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y, Liu, L. Deposit date: 2016-07-26 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.153 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOH	Lys33-linked di-ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y, Liu, L. Deposit date: 2016-07-27 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.946 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GO0	Solution structure of nedd8 from Trypanosoma brucei Descriptor: Ubiquitin, putative Authors: Wang, R, Liao, S, Zhang, J, Tu, X. Deposit date: 2016-07-25 Release date: 2017-07-26 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of nedd8 from Trypanosoma brucei To Be Published
5GO8	Linear tetra-ubiquitin Descriptor: D-ubiquitin, ubiquitin Authors: Gao, S, Pan, M, Zheng, Y. Deposit date: 2016-07-26 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOD	Lys27-linked di-ubiquitin Descriptor: D-ubiquitin, MAGNESIUM ION, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y. Deposit date: 2016-07-26 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOJ	Lys63-linked di-ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y, Liu, L. Deposit date: 2016-07-27 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.549 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5H07	TNIP2-Ub complex, C2 form Descriptor: Polyubiquitin-C, TNFAIP3-interacting protein 2 Authors: Lo, Y.C, Lin, S.C. Deposit date: 2016-10-04 Release date: 2017-03-08 Method: X-RAY DIFFRACTION (2.586 Å) Cite: Structural Insights into Linear Tri-ubiquitin Recognition by A20-Binding Inhibitor of NF-kappa B, ABIN-2 Structure, 25, 2017
3NOB	Structure of K11-linked di-ubiquitin Descriptor: SULFATE ION, Ubiquitin Authors: Dong, K.C, Matsumoto, M.L, Hymowitz, S.G. Deposit date: 2010-06-25 Release date: 2010-08-11 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.19 Å) Cite: K11-Linked Polyubiquitination in Cell Cycle Control Revealed by a K11 Linkage-Specific Antibody. Mol.Cell, 39, 2010
3NS8	Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5 Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ubiquitin Authors: Zhang, D, LaRonde-LeBlanc, N, Fushman, D. Deposit date: 2010-07-01 Release date: 2011-07-20 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.707 Å) Cite: Structural and biochemical studies of the open state of Lys48-linked diubiquitin. Biochim.Biophys.Acta, 1823, 2012
3OJ3	Crystal structure of the A20 ZnF4 and ubiquitin complex Descriptor: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION Authors: Bosanac, I, Hymowitz, S.G. Deposit date: 2010-08-20 Release date: 2010-12-08 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling Mol.Cell, 40, 2010
5GVI	Zebrafish USP30 in complex with Lys6-linked diubiquitin Descriptor: Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION, ubiquitin Authors: Sato, Y, Fukai, S. Deposit date: 2016-09-05 Release date: 2017-09-13 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Structural basis for specific cleavage of Lys6-linked polyubiquitin chains by USP30 Nat. Struct. Mol. Biol., 24, 2017
3ONS	Crystal structure of Human Ubiquitin in a new crystal form Descriptor: Ubiquitin Authors: Amodeo, G.A, Huang, K.Y, Mcdermott, A.E, Tong, L. Deposit date: 2010-08-30 Release date: 2011-02-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch. Protein Sci., 20, 2011
5GO7	Linear tri-ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y. Deposit date: 2016-07-26 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.801 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOC	Lys11-linked diubiquitin Descriptor: D-ubiquitin, SODIUM ION, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y. Deposit date: 2016-07-26 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.733 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
5GOI	Lys48-linked di-ubiquitin Descriptor: D-ubiquitin, Ubiquitin Authors: Gao, S, Pan, M, Zheng, Y, Liu, L. Deposit date: 2016-07-27 Release date: 2016-11-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.594 Å) Cite: Monomer/Oligomer Quasi-Racemic Protein Crystallography J.Am.Chem.Soc., 138, 2016
3QHT	Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO Descriptor: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3 Authors: Koide, S, Gilbreth, R.N. Deposit date: 2011-01-26 Release date: 2011-05-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proc.Natl.Acad.Sci.USA, 108, 2011
5JBV	Lys27-linked triubiquitin Descriptor: D-ubiquitin, NITRATE ION, Ubiquitin Authors: Pan, M, Gao, S, Zheng, Y. Deposit date: 2016-04-13 Release date: 2016-05-18 Last modified: 2022-02-09 Method: X-RAY DIFFRACTION (2.104 Å) Cite: Structure of Lys27-linked triubiquitin To Be Published
4HJK	U7Ub7 Disulfide variant Descriptor: PHOSPHATE ION, Ubiquitin Authors: Murray, J.M, Rouge, L. Deposit date: 2012-10-12 Release date: 2012-11-21 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.784 Å) Cite: Potent and selective inhibitors of USP7/HAUSP activity by protein conformational stabilization to be published
4IG7	Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester Descriptor: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin C-terminal hydrolase 37 Authors: Das, C, Kim, M.I, Morrow, M.E. Deposit date: 2012-12-16 Release date: 2013-05-29 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.996 Å) Cite: Stabilization of an Unusual Salt Bridge in Ubiquitin by the Extra C‑Terminal Domain of the Proteasome-Associated Deubiquitinase UCH37 as a Mechanism of Its Exo Specificity. Biochemistry, 52, 2013
2DZI	2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX) Descriptor: Ubiquitin-like protein 4A Authors: Zhao, C, Sato, M, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-09-29 Release date: 2007-03-29 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: 2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX) To be Published
4K7U	Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM hUb Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Fermani, S, Falini, G, Calvaresi, M, Bottoni, A, Arnesano, F, Natile, G. Deposit date: 2013-04-17 Release date: 2013-05-08 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Conformational selection of ubiquitin quaternary structures driven by zinc ions. Chemistry, 19, 2013
2BWE	The crystal structure of the complex between the UBA and UBL domains of Dsk2 Descriptor: DSK2 Authors: Lowe, E.D, Hasan, N, Trempe, J.-F, Fonso, L, Noble, M.E.M, Endicott, J.A, Johnson, L.N, Brown, N.R. Deposit date: 2005-07-13 Release date: 2006-01-25 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structures of the Dsk2 Ubl and Uba Domains and Their Complex. Acta Crystallogr.,Sect.D, 62, 2006

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