Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WLL
DownloadVisualize
BU of 5wll by Molmil
De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4DH1
Descriptor: GLYCEROL, Helical Bundle 4DH1, ZINC ION
Authors:Zhang, S.-Q, Liu, L, DeGrado, W.F.
Deposit date:2017-07-27
Release date:2018-01-03
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:De Novo Design of Tetranuclear Transition Metal Clusters Stabilized by Hydrogen-Bonded Networks in Helical Bundles.
J. Am. Chem. Soc., 140, 2018
5WQV
DownloadVisualize
BU of 5wqv by Molmil
Crystal structure of PriB mutant - S55A
Descriptor: Primosomal replication protein N
Authors:Fujiyama, S, Shiroishi, M, Katayama, T, Abe, Y, Ueda, T.
Deposit date:2016-11-28
Release date:2017-11-29
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Insight into the interaction between PriB and DnaT on bacterial DNA replication restart: Significance of the residues on PriB dimer interface and highly acidic region on DnaT.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
5WKR
DownloadVisualize
BU of 5wkr by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference complexed with naringenin (ancCC)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Engineered Chalcone Isomerase ancCC, ...
Authors:Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
Deposit date:2017-07-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
5WL4
DownloadVisualize
BU of 5wl4 by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference (ancR3)
Descriptor: Engineered Chalcone Isomerase ancR3, FORMIC ACID
Authors:Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
Deposit date:2017-07-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
5WLE
DownloadVisualize
BU of 5wle by Molmil
Crystal structure of the PPS PHD finger in complex with H3K4me3
Descriptor: H3K4me3 Peptide, Protein partner of snf, isoform A, ...
Authors:Klein, B.J, Kutateladze, T.G.
Deposit date:2017-07-26
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO.
Structure, 25, 2017
5WCU
DownloadVisualize
BU of 5wcu by Molmil
Crystal structure of 167 bp nucleosome bound to the globular domain of linker histone H5
Descriptor: DNA (167-MER), Histone H2A, Histone H2B, ...
Authors:Jiang, J.S, Zhou, B.R.
Deposit date:2017-07-02
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (5.53 Å)
Cite:Revisit of Reconstituted 30-nm Nucleosome Arrays Reveals an Ensemble of Dynamic Structures.
J. Mol. Biol., 430, 2018
5W7W
DownloadVisualize
BU of 5w7w by Molmil
Crystal Structure of FHA domain of human APLF
Descriptor: Aprataxin and PNK-like factor, FORMIC ACID, SODIUM ION
Authors:Pedersen, L.C, Kim, K, London, R.E.
Deposit date:2017-06-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.348 Å)
Cite:Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Nucleic Acids Res., 45, 2017
5WB5
DownloadVisualize
BU of 5wb5 by Molmil
Leishmania IF4E-1 bound to Leishmania 4E-IP1
Descriptor: DI(HYDROXYETHYL)ETHER, Putative eukaryotic translation initiation factor eIF-4E, Uncharacterized protein
Authors:Leger-Abraham, M, Meleppattu, S, Arthanari, H, Zinoviev, A, Boeszoermenyi, A, Wagner, G, Shapira, M.
Deposit date:2017-06-27
Release date:2018-03-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for LeishIF4E-1 modulation by an interacting protein in the human parasite Leishmania major.
Nucleic Acids Res., 46, 2018
5WLJ
DownloadVisualize
BU of 5wlj by Molmil
De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4EH1
Descriptor: De Novo Metal Binding Helical Bundle, ZINC ION
Authors:Zhang, S.-Q, Liu, L, DeGrado, W.F.
Deposit date:2017-07-27
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:De Novo Design of Tetranuclear Transition Metal Clusters Stabilized by Hydrogen-Bonded Networks in Helical Bundles.
J. Am. Chem. Soc., 140, 2018
5WLM
DownloadVisualize
BU of 5wlm by Molmil
De Novo Design of Polynuclear Transition Metal Clusters in Helix Bundles-4DH2
Descriptor: Helical Bundle 4DH2, ZINC ION
Authors:Zhang, S.-Q, Liu, L, DeGrado, W.F.
Deposit date:2017-07-27
Release date:2018-01-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:De Novo Design of Tetranuclear Transition Metal Clusters Stabilized by Hydrogen-Bonded Networks in Helical Bundles.
J. Am. Chem. Soc., 140, 2018
5WC7
DownloadVisualize
BU of 5wc7 by Molmil
CypA Mutant - I97V S99T C115S
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Fraser, J.S.
Deposit date:2017-06-29
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Rescue of conformational dynamics in enzyme catalysis by directed evolution.
Nat Commun, 9, 2018
3ZRX
DownloadVisualize
BU of 3zrx by Molmil
The high resolution structure of a dimeric Hamp-Dhp fusion displays strong asymmetry
Descriptor: AF1503 PROTEIN, OSMOLARITY SENSOR PROTEIN ENVZ
Authors:Zeth, K, Hulko, M, Martin, J.
Deposit date:2011-06-20
Release date:2011-06-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Mechanism of Regulation of Receptor Histidine Kinases.
Structure, 20, 2012
3ZRV
DownloadVisualize
BU of 3zrv by Molmil
The high resolution structure of a dimeric Hamp-Dhp fusion displays asymmetry - A291F mutant
Descriptor: HAMP, OSMOLARITY SENSOR PROTEIN ENVZ
Authors:Zeth, K, Hulko, M, Ferris, H.U, Martin, J.
Deposit date:2011-06-20
Release date:2011-07-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanism of Regulation of Receptor Histidine Kinases.
Structure, 20, 2012
6FSO
DownloadVisualize
BU of 6fso by Molmil
Crystal Structure of TGT in complex with methyl({[5-(pyridin-3-yloxy)furan-2-yl]methyl})amine
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Hassaan, E, Heine, A, Klebe, G.
Deposit date:2018-02-20
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Fragments as Novel Starting Points for tRNA-Guanine Transglycosylase Inhibitors Found by Alternative Screening Strategies.
Chemmedchem, 15, 2020
4ARD
DownloadVisualize
BU of 4ard by Molmil
Structure of the immature retroviral capsid at 8A resolution by cryo- electron microscopy
Descriptor: CAPSID PROTEIN P27
Authors:Bharat, T.A.M, Davey, N.E, Ulbrich, P, Riches, J.D, Marco, A.D, Rumlova, M, Sachse, C, Ruml, T, Briggs, J.A.G.
Deposit date:2012-04-23
Release date:2012-05-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of the Immature Retroviral Capsid at 8A Resolution by Cryo-Electron Microscopy.
Nature, 487, 2012
7PNP
DownloadVisualize
BU of 7pnp by Molmil
Human Angiogenin mutant-S28A
Descriptor: Angiogenin
Authors:Papaioannou, O.S.E, Leonidas, D.D.
Deposit date:2021-09-07
Release date:2022-05-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Biochemical Characterization of the Human Angiogenin-Proliferating Cell Nuclear Antigen Interaction.
Biochemistry, 2023
7N00
DownloadVisualize
BU of 7n00 by Molmil
Anaplastic lymphoma kinase (ALK) extracellular fragment of ligand binding region 648-1025 in complex with AUG-alpha
Descriptor: ALK and LTK ligand 2, ALK tyrosine kinase receptor
Authors:Reshetnyak, A.V, Myasnikov, A.G, Rossi, P, Miller, D.J, Kalodimos, C.G.
Deposit date:2021-05-24
Release date:2021-11-24
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (2.27 Å)
Cite:Mechanism for the activation of the anaplastic lymphoma kinase receptor.
Nature, 600, 2021
7MZY
DownloadVisualize
BU of 7mzy by Molmil
Anaplastic lymphoma kinase (ALK) extracellular fragment of ligand binding region 673-986
Descriptor: ACETATE ION, ALK tyrosine kinase receptor
Authors:Reshetnyak, A.V, Sowaileh, M, Miller, D.J, Rossi, P, Myasnikov, A.G, Kalodimos, C.G.
Deposit date:2021-05-24
Release date:2021-11-24
Last modified:2021-12-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanism for the activation of the anaplastic lymphoma kinase receptor.
Nature, 600, 2021
4YN6
DownloadVisualize
BU of 4yn6 by Molmil
Structural Insight reveals dynamics in repeating r(CAG) transcript found in Huntington's disease (HD) and Spinocerebellar ataxias (SCAs)
Descriptor: PHOSPHATE ION, RNA (5'-R(P*UP*UP*GP*GP*GP*CP*CP*AP*GP*CP*AP*GP*CP*AP*GP*GP*UP*CP*C)-3')
Authors:Tawani, A, Kumar, A.
Deposit date:2015-03-09
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural Insights Reveal the Dynamics of the Repeating r(CAG) Transcript Found in Huntington's Disease (HD) and Spinocerebellar Ataxias (SCAs)
Plos One, 10, 2015
7QFC
DownloadVisualize
BU of 7qfc by Molmil
Crystal structure of cytotoxin 13 from Naja naja, orthorhombic form
Descriptor: Cytotoxin 13
Authors:Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V.
Deposit date:2021-12-05
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling.
Toxins, 14, 2022
7QHI
DownloadVisualize
BU of 7qhi by Molmil
Crystal structure of cytotoxin 13 from Naja naja, hexagonal form
Descriptor: Cytotoxin 13
Authors:Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V.
Deposit date:2021-12-12
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling.
Toxins, 14, 2022
4YEG
DownloadVisualize
BU of 4yeg by Molmil
Characterisation of Polyphosphate Kinase 2 from the Intracellular Pathogen Francisella tularensis
Descriptor: Polyphosphate kinase 2
Authors:Parnell, A.E, Roach, P.L.
Deposit date:2015-02-24
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Biochemical and structural characterization of polyphosphate kinase 2 from the intracellular pathogen Francisella tularensis.
Biosci.Rep., 36, 2016
4X8H
DownloadVisualize
BU of 4x8h by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant
Descriptor: Adenylate kinase
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
5F8A
DownloadVisualize
BU of 5f8a by Molmil
Crystal structure of the ternary EcoRV-DNA-Lu complex with uncleaved DNA substrate. Lanthanide binding to EcoRV-DNA complex inhibits cleavage.
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*T)-3'), LUTETIUM (III) ION, ...
Authors:Sangani, S.S, Kehr, A.D, Sinha, K, Rule, G.S, Jen-Jacobson, L.
Deposit date:2015-12-09
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Metal Ion Binding at the Catalytic Site Induces Widely Distributed Changes in a Sequence Specific Protein-DNA Complex.
Biochemistry, 55, 2016
4X5X
DownloadVisualize
BU of 4x5x by Molmil
HLA-DR1 mutant bN82A with covalently linked CLIP106-120(M107W)
Descriptor: HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain
Authors:Guenther, S, Freund, C.
Deposit date:2014-12-06
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.199 Å)
Cite:MHC class II complexes sample intermediate states along the peptide exchange pathway.
Nat Commun, 7, 2016

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon