Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3M4G
DownloadVisualize
BU of 3m4g by Molmil
H57A HFQ from Pseudomonas Aeruginosa
Descriptor: Protein hfq, ZINC ION
Authors:Moskaleva, O, Melnik, B, Gabdulkhakov, A, Garber, M, Nikonov, S, Stolboushkina, E, Nikulin, A.
Deposit date:2010-03-11
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structures of mutant forms of Hfq from Pseudomonas aeruginosa reveal the importance of the conserved His57 for the protein hexamer organization.
Acta Crystallogr.,Sect.F, 66, 2010
3M6O
DownloadVisualize
BU of 3m6o by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B)
Descriptor: Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M52
DownloadVisualize
BU of 3m52 by Molmil
Crystal structure of the BTB domain from the Miz-1/ZBTB17 transcription regulator
Descriptor: ACETATE ION, ZINC ION, Zinc finger and BTB domain-containing protein 17
Authors:Stogios, P.J, Cuesta-Seijo, J.A, Chen, L, Prive, G.G.
Deposit date:2010-03-12
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Insights into Strand Exchange in BTB Domain Dimers from the Crystal Structures of FAZF and Miz1.
J.Mol.Biol., 400, 2010
6DMG
DownloadVisualize
BU of 6dmg by Molmil
A multiconformer ligand model of EK6 bound to ERK2
Descriptor: 1,2-ETHANEDIOL, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Hudson, B.M, van Zundert, G.C.P, Keedy, D.A, Fonseca, R, Heliou, A, Suresh, P, Borrelli, K, Day, T, Fraser, J.S, van den Bedem, H.
Deposit date:2018-06-05
Release date:2018-12-19
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:qFit-ligand Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X-Ray Electron Density Maps.
J. Med. Chem., 61, 2018
3MA5
DownloadVisualize
BU of 3ma5 by Molmil
Crystal structure of the tetratricopeptide repeat domain protein Q2S6C5_SALRD from Salinibacter ruber. Northeast Structural Genomics Consortium Target SrR115c.
Descriptor: Tetratricopeptide repeat domain protein
Authors:Vorobiev, S, Neely, H, Seetharaman, J, Wang, H, Foote, E.L, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-03-23
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the tetratricopeptide repeat domain protein Q2S6C5_SALRD from Salinibacter ruber.
To be Published
6QMJ
DownloadVisualize
BU of 6qmj by Molmil
Small molecule inhibitor of the KEAP1-NRF2 protein-protein interaction
Descriptor: (3~{S})-3-(7-methoxy-1-methyl-benzotriazol-5-yl)-3-[4-methyl-3-[[methyl(phenylsulfonyl)amino]methyl]phenyl]propanoic acid, CHLORIDE ION, Kelch-like ECH-associated protein 1, ...
Authors:Davies, T.G.
Deposit date:2019-02-07
Release date:2019-04-24
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure-Activity and Structure-Conformation Relationships of Aryl Propionic Acid Inhibitors of the Kelch-like ECH-Associated Protein 1/Nuclear Factor Erythroid 2-Related Factor 2 (KEAP1/NRF2) Protein-Protein Interaction.
J.Med.Chem., 62, 2019
3M6R
DownloadVisualize
BU of 3m6r by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41M mutant in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1B, ZINC ION
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2010-03-16
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M7Q
DownloadVisualize
BU of 3m7q by Molmil
Crystal structure of recombinant Kunitz Type serine protease Inhibitor-1 from the Caribbean sea anemone stichodactyla helianthus in complex with bovine pancreatic trypsin
Descriptor: Cationic trypsin, Kunitz-type proteinase inhibitor SHPI-1, PHOSPHATE ION
Authors:Garcia-Fernandez, R, Redecke, L, Pons, T, Perbandt, M, Gil, D, Talavera, A, Gonzalez, Y, de los angeles Chavez, M, Betzel, C.
Deposit date:2010-03-17
Release date:2011-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into serine protease inhibition by a marine invertebrate BPTI Kunitz-type inhibitor.
J.Struct.Biol., 180, 2012
3MD2
DownloadVisualize
BU of 3md2 by Molmil
Crystal structure of the matrix protein 1 from influenza A virus (A/California/04/2009 (H1N1))
Descriptor: matrix protein 1
Authors:Liu, Q, Kloss, B, Skowronski, E.S, Height, J, Love, J.
Deposit date:2010-03-29
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the matrix protein 1 from influenza A virus (A/California/04/2009 (H1N1))
To be Published
3MFQ
DownloadVisualize
BU of 3mfq by Molmil
A Glance into the Metal Binding Specificity of TroA: Where Elaborate Behaviors Occur in the Active Center
Descriptor: High-affinity zinc uptake system protein znuA, ZINC ION
Authors:Gao, G.F, Zheng, B, Zhang, Q, Gao, J, Han, H, Li, M.
Deposit date:2010-04-03
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Insight into the interaction of metal ions with TroA from Streptococcus suis
Plos One, 6, 2011
6QP6
DownloadVisualize
BU of 6qp6 by Molmil
Cryo-EM structure of calcium-bound mTMEM16F lipid scramblase in digitonin
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-6, CALCIUM ION
Authors:Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C.
Deposit date:2019-02-13
Release date:2019-03-06
Last modified:2019-04-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F.
Elife, 8, 2019
3MCF
DownloadVisualize
BU of 3mcf by Molmil
Crystal structure of human diphosphoinositol polyphosphate phosphohydrolase 3-alpha
Descriptor: CITRATE ANION, Diphosphoinositol polyphosphate phosphohydrolase 3-alpha, GLYCEROL
Authors:Tresaugues, L, Welin, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Karlberg, T, Kol, S, Kotenyova, T, Moche, M, Nyman, T, Persson, C, Schuler, H, Schutz, P, Siponen, M.I, Thorsell, A.G, van der Berg, S, Wahlberg, E, Weigelt, J, Wisniewska, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2010-03-29
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human diphosphoinositol polyphosphate phosphohydrolase 3-alpha
To be Published
3MGT
DownloadVisualize
BU of 3mgt by Molmil
Crystal structure of a H5-specific CTL epitope variant derived from H5N1 influenza virus in complex with HLA-A*0201
Descriptor: 10-meric peptide from Hemagglutinin, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Sun, Y, Liu, J, Yang, M, Gao, F, Zhou, J, Kitamura, Y.
Deposit date:2010-04-07
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Identification and structural definition of H5-specific CTL epitopes restricted by HLA-A*0201 derived from the H5N1 subtype of influenza A viruses
J.Gen.Virol., 91, 2010
6QQ0
DownloadVisualize
BU of 6qq0 by Molmil
Crystal structure of nitrite bound Y323E mutant of haem-Cu containing nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Antonyuk, S.V, Shenoy, R.T, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-16
Release date:2019-11-06
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019
3MH4
DownloadVisualize
BU of 3mh4 by Molmil
HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Descriptor: Protease do
Authors:Krojer, T, Sawa, J, Huber, R, Clausen, T.
Deposit date:2010-04-07
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues
Nat.Struct.Mol.Biol., 17, 2010
3MDX
DownloadVisualize
BU of 3mdx by Molmil
Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Brucella melitensis, rhombohedral crystal form
Descriptor: 1,2-ETHANEDIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-03-31
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of deoxyuridine 5-triphosphate nucleotidohydrolase from Brucella melitensis, rhombohedral crystal form
To be Published
3MJW
DownloadVisualize
BU of 3mjw by Molmil
PI3 Kinase gamma with a benzofuranone inhibitor
Descriptor: (2Z)-4,6-dihydroxy-2-[(8-methoxy-1,2,3,4-tetrahydropyrazino[1,2-a]indol-10-yl)methylidene]-1-benzofuran-3(2H)-one, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Bard, J, Svenson, K.
Deposit date:2010-04-13
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:5-Ureidobenzofuranone indoles as potent and efficacious inhibitors of PI3 kinase-alpha and mTOR for the treatment of breast cancer.
Bioorg.Med.Chem.Lett., 20, 2010
3MEG
DownloadVisualize
BU of 3meg by Molmil
HIV-1 K103N Reverse Transcriptase in Complex with TMC278
Descriptor: 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, SULFATE ION, p51 Reverse transcriptase, ...
Authors:Lansdon, E.B.
Deposit date:2010-03-31
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structures of HIV-1 Reverse Transcriptase with Etravirine (TMC125) and Rilpivirine (TMC278): Implications for Drug Design.
J.Med.Chem., 53, 2010
3MEX
DownloadVisualize
BU of 3mex by Molmil
Crystal structure of MexR in oxidized state
Descriptor: Multidrug resistance operon repressor
Authors:Chen, H, Yi, C, Zhang, J, Zhang, W, Yang, C.-G, He, C.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the oxidation-sensing mechanism of the antibiotic resistance of regulator MexR
Embo Rep., 11, 2010
3MKM
DownloadVisualize
BU of 3mkm by Molmil
Crystal structure of the E. coli pyrimidine nucleoside hydrolase YeiK (Apo-form)
Descriptor: CALCIUM ION, Putative uncharacterized protein YeiK
Authors:Garau, G, Fornili, A, Giabbai, B, Degano, M.
Deposit date:2010-04-15
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Energy Landscapes Associated with Macromolecular Conformational Changes from Endpoint Structures
J.Am.Chem.Soc., 132, 2010
3MLA
DownloadVisualize
BU of 3mla by Molmil
BaNadD in complex with inhibitor 1_02
Descriptor: 4-[2-(anthracen-9-ylmethylidene)hydrazino]-N-(3-chlorophenyl)-4-oxobutanamide, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Huang, N, Eyobo, Y, Zhang, H.
Deposit date:2010-04-16
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complexes of bacterial nicotinate mononucleotide adenylyltransferase with inhibitors: implication for structure-based drug design and improvement.
J.Med.Chem., 53, 2010
6WZT
DownloadVisualize
BU of 6wzt by Molmil
CryoEM structure of influenza hemagglutinin A/Victoria/361/2011 in complex with cyno antibody 3B10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cyno antibody heavy chain, ...
Authors:Qiu, Y, Zhou, Y, Darricarrere, N.
Deposit date:2020-05-14
Release date:2021-03-10
Last modified:2021-03-17
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Broad neutralization of H1 and H3 viruses by adjuvanted influenza HA stem vaccines in nonhuman primates.
Sci Transl Med, 13, 2021
3MG9
DownloadVisualize
BU of 3mg9 by Molmil
Teg 12 Binary Structure Complexed with the Teicoplanin Aglycone
Descriptor: FORMIC ACID, GLYCEROL, TEG12, ...
Authors:Bick, M.J, Banik, J.J, Darst, S.A, Brady, S.F.
Deposit date:2010-04-05
Release date:2010-06-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal Structures of the Glycopeptide Sulfotransferase Teg12 in a Complex with the Teicoplanin Aglycone.
Biochemistry, 49, 2010
6QWV
DownloadVisualize
BU of 6qwv by Molmil
SARM1 SAM1-2 domains
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Sporny, M, Isupov, N.M, Opatowsky, Y.
Deposit date:2019-03-06
Release date:2019-07-03
Last modified:2019-09-18
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural Evidence for an Octameric Ring Arrangement of SARM1.
J.Mol.Biol., 431, 2019
3MGR
DownloadVisualize
BU of 3mgr by Molmil
Binding of Rubidium ions to the Nucleosome Core Particle
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2A, ...
Authors:Mohideen, K, Muhammad, R, Davey, C.A.
Deposit date:2010-04-07
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Perturbations in nucleosome structure from heavy metal association.
Nucleic Acids Res., 38, 2010

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon