PDB: 10940 resultsInfo pagesStatus searchChemie searchBIRD

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6NW5	Crystal structure of TmPep1050 aminopeptidase with its metal cofactors Descriptor: Aminopeptidase, COBALT (II) ION, HYDROXIDE ION, ... Authors: Dutoit, R. Deposit date: 2019-02-06 Release date: 2019-10-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.7 Å) Cite: How metal cofactors drive dimer-dodecamer transition of the M42 aminopeptidase TmPep1050 ofThermotoga maritima. J.Biol.Chem., 294, 2019
2J77	Beta-glucosidase from Thermotoga maritima in complex with deoxynojirimycin Descriptor: 1-DEOXYNOJIRIMYCIN, ACETATE ION, BETA-GLUCOSIDASE A, ... Authors: Gloster, T.M, Zechel, D, Davies, G.J. Deposit date: 2006-10-06 Release date: 2006-10-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J7B	Beta-glucosidase from Thermotoga maritima in complex with gluco- tetrazole Descriptor: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ... Authors: Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. Deposit date: 2006-10-06 Release date: 2006-10-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
2J78	Beta-glucosidase from Thermotoga maritima in complex with gluco- hydroximolactam Descriptor: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, 1,2-ETHANEDIOL, ACETATE ION, ... Authors: Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J. Deposit date: 2006-10-06 Release date: 2006-10-18 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics. J.Am.Chem.Soc., 129, 2007
5UX0	X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA and target DNA Descriptor: Argonaute protein, DNA (5'-D(P*AP*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*CP*C)-3'), RNA (5'-R(*G*GP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*AP*U)-3') Authors: Doxzen, K.W, Doudna, J.A. Deposit date: 2017-02-21 Release date: 2017-05-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.197 Å) Cite: DNA recognition by an RNA-guided bacterial Argonaute. PLoS ONE, 12, 2017
7UK2	Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with NN-390 Descriptor: Hdac6 protein, N-hydroxy-4-{[(propan-2-yl)(2,3,4,5-tetrafluorobenzene-1-sulfonyl)amino]methyl}benzamide, POTASSIUM ION, ... Authors: Erdogan, F, Seo, H.-S, Dhe-Paganon, S. Deposit date: 2022-03-31 Release date: 2022-11-02 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.6 Å) Cite: High Efficacy and Drug Synergy of HDAC6-Selective Inhibitor NN-429 in Natural Killer (NK)/T-Cell Lymphoma. Pharmaceuticals, 15, 2022
4QXG	Antigen binding fragment of an anti IFNAR1 antibody Descriptor: Fab, heavy chain, IgG1, ... Authors: Oganesyan, V.Y, Dall'Acqua, W.F. Deposit date: 2014-07-20 Release date: 2015-02-25 Last modified: 2015-04-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Molecular basis for antagonistic activity of anifrolumab, an anti-interferon-alpha receptor 1 antibody. MAbs, 7, 2015
4QYW	Structure of phosphono-CheY from T.maritima Descriptor: Chemotaxis protein CheY Authors: Beyersdorf, M.S, Sircar, R, Crane, B.R, Halkides, C.J. Deposit date: 2014-07-25 Release date: 2015-08-19 Last modified: 2019-07-17 Method: X-RAY DIFFRACTION (1.597 Å) Cite: Isolation, Phosphonomethylation, and Crystallization of phosphono-CheY from Thermotoga maritima To be Published
6WIB	Next generation monomeric IgG4 Fc Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin heavy constant gamma 4, ZINC ION Authors: Oganesyan, V.Y, Shan, L, Dall'Acqua, W, van Dyk, N. Deposit date: 2020-04-09 Release date: 2021-09-15 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.55 Å) Cite: In vivo pharmacokinetic enhancement of monomeric Fc and monovalent bispecific designs through structural guidance. Commun Biol, 4, 2021
6WMH	Next generation monomeric IgG4 Fc Descriptor: Immunoglobulin heavy constant gamma 4 Authors: Oganesyan, V.Y, Shan, L, van Dyk, N, Dall'Acqua, W.F. Deposit date: 2020-04-21 Release date: 2021-09-15 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: In vivo pharmacokinetic enhancement of monomeric Fc and monovalent bispecific designs through structural guidance. Commun Biol, 4, 2021
6WNA	Next generation monomeric IgG4 Fc Descriptor: Beta-2-microglobulin, IgG receptor FcRn large subunit p51, Immunoglobulin heavy constant gamma 4, ... Authors: Oganesyan, V.Y, Shan, L, van Dyk, N, Dall'Acqua, W.F. Deposit date: 2020-04-22 Release date: 2021-09-15 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.4 Å) Cite: In vivo pharmacokinetic enhancement of monomeric Fc and monovalent bispecific designs through structural guidance. Commun Biol, 4, 2021
6WOL	Next generation monomeric IgG4 Fc bound to neonatal Fc receptor Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, IgG receptor FcRn large subunit p51, ... Authors: Oganesyan, V.Y, Shan, L, van Dyk, N, Dall'Acqua, W.F. Deposit date: 2020-04-24 Release date: 2021-09-15 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.49 Å) Cite: In vivo pharmacokinetic enhancement of monomeric Fc and monovalent bispecific designs through structural guidance. Commun Biol, 4, 2021
2Q8U	CRYSTAL STRUCTURE OF MRE11 FROM THERMOTOGA MARITIMA MSB8 (TM1635) AT 2.20 A RESOLUTION Descriptor: Exonuclease, putative Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2007-06-11 Release date: 2007-06-26 Last modified: 2023-01-25 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of the first eubacterial Mre11 nuclease reveals novel features that may discriminate substrates during DNA repair. J.Mol.Biol., 397, 2010
4UB0	New design for monovalent bispecific IgG through cysteine engineering of the CH1-CL interface Descriptor: IgG1, heavy chain, light chain Authors: Oganesyan, V.Y, Dall'Acqua, W.F. Deposit date: 2014-08-11 Release date: 2015-07-15 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Improving target cell specificity using a novel monovalent bispecific IgG design. Mabs, 7, 2015
4JPB	The structure of a ternary complex between CheA domains P4 and P5 with CheW and with an unzipped fragment of TM14, a chemoreceptor analog from Thermotoga maritima. Descriptor: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein Authors: Li, X, Bayas, C, Bilwes, A.M, Crane, B.R. Deposit date: 2013-03-19 Release date: 2013-08-28 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.186 Å) Cite: The 3.2 angstrom resolution structure of a receptor: CheA:CheW signaling complex defines overlapping binding sites and key residue interactions within bacterial chemosensory arrays. Biochemistry, 52, 2013
2PLM	Crystal structure of the protein TM0936 from Thermotoga maritima complexed with ZN and S-inosylhomocysteine Descriptor: (2S)-2-AMINO-4-({[(2S,3S,4R,5R)-3,4-DIHYDROXY-5-(6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)TETRAHYDROFURAN-2-YL]METHYL}THIO)BUTANOIC ACID, Uncharacterized protein, ZINC ION Authors: Fedorov, A.A, Fedorov, E.V, Hermann, J.C, Marti-Arbona, R, Shoichet, B.K, Raushel, F.M, Almo, S.C. Deposit date: 2007-04-20 Release date: 2007-07-17 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure-based activity prediction for an enzyme of unknown function Nature, 448, 2007
5UHT	Structure of the Thermotoga maritima HK853-BeF3-RR468 complex at pH 5.0 Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... Authors: Liu, Y, Rose, J, Jiang, L, Zhou, P. Deposit date: 2017-01-12 Release date: 2017-12-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.68 Å) Cite: A pH-gated conformational switch regulates the phosphatase activity of bifunctional HisKA-family histidine kinases. Nat Commun, 8, 2017
1OIN	Family 1 b-glucosidase from Thermotoga maritima Descriptor: 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE A Authors: Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J. Deposit date: 2003-06-19 Release date: 2003-11-25 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases J.Am.Chem.Soc., 125, 2003
7BYT	Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A with galactose Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ... Authors: Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S. Deposit date: 2020-04-24 Release date: 2020-11-04 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium . J.Biol.Chem., 295, 2020
7BYX	Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A E208A with beta-1,3-galactotriose Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S. Deposit date: 2020-04-24 Release date: 2020-11-04 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium . J.Biol.Chem., 295, 2020
5F3D	Structure of quinolinate synthase in complex with reaction intermediate W Descriptor: 2-IMINO,3-CARBOXY,5-OXO,6-HYDROXY HEXANOIC ACID, IRON/SULFUR CLUSTER, Quinolinate synthase A, ... Authors: Volbeda, A, Fontecilla-Camps, J.C. Deposit date: 2015-12-02 Release date: 2016-08-31 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
7BYS	Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A apo form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CITRIC ACID, ... Authors: Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S. Deposit date: 2020-04-24 Release date: 2020-11-04 Last modified: 2021-01-13 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium . J.Biol.Chem., 295, 2020
7BYV	Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A E208Q with beta-1,3-galactotriose Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Galactan 1,3-beta-galactosidase, ... Authors: Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S. Deposit date: 2020-04-24 Release date: 2020-11-04 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium . J.Biol.Chem., 295, 2020
5KBW	Crystal structure of TmRibU, the riboflavin-binding S subunit from the Thermotoga maritima ECF transporter Descriptor: RIBOFLAVIN, Riboflavin transporter RibU Authors: Karpowich, N.K, Wang, D.N, Song, J.M. Deposit date: 2016-06-03 Release date: 2016-06-29 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.6093 Å) Cite: An Aromatic Cap Seals the Substrate Binding Site in an ECF-Type S Subunit for Riboflavin. J.Mol.Biol., 428, 2016
3G6B	Crystal structure of a Soluble Chemoreceptor from Thermotoga maritima Asn217Ile mutant Descriptor: Methyl-accepting chemotaxis protein Authors: Pollard, A.M, Bilwes, A.M, Crane, B.R. Deposit date: 2009-02-06 Release date: 2009-07-28 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3 Å) Cite: The structure of a soluble chemoreceptor suggests a mechanism for propagating conformational signals. Biochemistry, 48, 2009

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