Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DLU
DownloadVisualize
BU of 1dlu by Molmil
UNLIGANDED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BIOSYNTHETIC THIOLASE, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-12
Release date:2000-04-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
4LEX
DownloadVisualize
BU of 4lex by Molmil
Unliganded crystal structure of mAb7
Descriptor: FAB HEAVY CHAIN, FAB LIGHT CHAIN
Authors:Murray, J.M, Mukund, S.
Deposit date:2013-06-26
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Inhibitory mechanism of an allosteric antibody targeting the glucagon receptor.
J.Biol.Chem., 288, 2013
1H9U
DownloadVisualize
BU of 1h9u by Molmil
The structure of the human retinoid-X-receptor beta ligand binding domain in complex with the specific synthetic agonist LG100268
Descriptor: 6-[1-(3,5,5,8,8-PENTAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)CYCLOPROPYL]PYRIDINE-3-CARBOXYLIC ACID, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Schwabe, J.W.R, Love, J.D, Gooch, J.T.
Deposit date:2001-03-21
Release date:2002-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Structural Basis for the Specificity of Retinoid-X Receptor-Selective Agonists: New Insights Into the Role of Helix H12
J.Biol.Chem., 277, 2002
5T50
DownloadVisualize
BU of 5t50 by Molmil
LIGAND-FREE LECTIN FROM BAUHINIA FORFICATA
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Lectin
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2016-08-30
Release date:2016-12-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural analysis and unique molecular recognition properties of a Bauhinia forficata lectin that inhibits cancer cell growth.
FEBS J., 284, 2017
1HKH
DownloadVisualize
BU of 1hkh by Molmil
unligated gamma lactamase from an Aureobacterium species
Descriptor: GAMMA LACTAMASE, SULFATE ION
Authors:Line, K, Isupov, M.N, Littlechild, J.A.
Deposit date:2003-03-10
Release date:2004-03-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The crystal structure of a (-) gamma-lactamase from an Aureobacterium species reveals a tetrahedral intermediate in the active site.
J. Mol. Biol., 338, 2004
2BVJ
DownloadVisualize
BU of 2bvj by Molmil
Ligand-free structure of cytochrome P450 PikC (CYP107L1)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BETA-MERCAPTOETHANOL, CYTOCHROME P450 MONOOXYGENASE, ...
Authors:Sherman, D.H, Li, S, Yermalitskaya, L.V, Kim, Y, Smith, J.A, Waterman, M.R, Podust, L.M.
Deposit date:2005-06-28
Release date:2006-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structural Basis for Substrate Anchoring, Active Site Selectivity, and Product Formation by P450 Pikc from Streptomyces Venezuelae.
J.Biol.Chem., 281, 2006
6C5I
DownloadVisualize
BU of 6c5i by Molmil
Unliganded S25-5 Fab
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Evans, S.V, Haji-Ghassemi, O.
Deposit date:2018-01-16
Release date:2019-01-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Subtle Changes in the Combining Site of the Chlamydiaceae-Specific mAb S25-23 Increase the Antibody-Carbohydrate Binding Affinity by an Order of Magnitude.
Biochemistry, 58, 2019
1WWB
DownloadVisualize
BU of 1wwb by Molmil
LIGAND BINDING DOMAIN OF HUMAN TRKB RECEPTOR
Descriptor: PROTEIN (Brain Derived Neurotrophic Factor Receptor TrkB)
Authors:Wiesmann, C, Ultsch, M.H, Bass, S.H, De Vos, A.M.
Deposit date:1999-05-03
Release date:1999-07-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the neurotrophin-binding domain of TrkA, TrkB and TrkC.
J.Mol.Biol., 290, 1999
2BZ9
DownloadVisualize
BU of 2bz9 by Molmil
Ligand-free structure of sterol 14alpha-demethylase from Mycobacterium tuberculosis in P2(1) space group
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, STEROL 14ALPHA-DEMETHYLASE
Authors:Yermalitskaya, L.V, Waterman, M.R, Podust, L.M.
Deposit date:2005-08-12
Release date:2006-12-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Small Molecule Scaffolds for Cyp51 Inhibitors Identified by High Throughput Screening and Defined by X-Ray Crystallography
Antimicrob.Agents Chemother., 51, 2007
3S9S
DownloadVisualize
BU of 3s9s by Molmil
Ligand binding domain of PPARgamma complexed with a benzimidazole partial agonist
Descriptor: 1-(3,4-dichlorobenzyl)-2-methyl-N-[(1R)-1-phenylpropyl]-1H-benzimidazole-5-carboxamide, Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
Authors:Lambert, M.H, Xu, R.X.
Deposit date:2011-06-02
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Discovery of GSK1997132B a novel centrally penetrant benzimidazole PPARgamma partial agonist.
Bioorg.Med.Chem.Lett., 21, 2011
4IEQ
DownloadVisualize
BU of 4ieq by Molmil
unliganded Cysteine Dioxygenase at pH 5.0 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.396 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEP
DownloadVisualize
BU of 4iep by Molmil
unliganded Cysteine Dioxygenase at pH 4.5 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEZ
DownloadVisualize
BU of 4iez by Molmil
unliganded Cysteine Dioxygenase at pH 8.0
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
4IEO
DownloadVisualize
BU of 4ieo by Molmil
unliganded Cysteine Dioxygenase at pH 4.0 in the presence of Cys
Descriptor: Cysteine dioxygenase type 1, FE (II) ION
Authors:Driggers, C.M, Cooley, R.B, Karplus, P.A.
Deposit date:2012-12-13
Release date:2013-06-26
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Cysteine Dioxygenase Structures from pH4 to 9: Consistent Cys-Persulfenate Formation at Intermediate pH and a Cys-Bound Enzyme at Higher pH.
J.Mol.Biol., 425, 2013
3AQ0
DownloadVisualize
BU of 3aq0 by Molmil
Ligand-bound form of Arabidopsis medium/long-chain length prenyl pyrophosphate synthase (surface polar residue mutant)
Descriptor: 3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid, DI(HYDROXYETHYL)ETHER, FARNESYL DIPHOSPHATE, ...
Authors:Hsieh, F.-L, Chang, T.-H, Ko, T.-P, Wang, A.H.-J.
Deposit date:2010-10-24
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure and mechanism of an Arabidopsis medium/long-chain-length prenyl pyrophosphate synthase
Plant Physiol., 155, 2011
3FJ5
DownloadVisualize
BU of 3fj5 by Molmil
Crystal structure of the c-src-SH3 domain
Descriptor: ACETATE ION, GLYCEROL, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Camara-Artigas, A.
Deposit date:2008-12-14
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Intertwined dimeric structure for the SH3 domain of the c-Src tyrosine kinase induced by polyethylene glycol binding
Febs Lett., 583, 2009
2LZE
DownloadVisualize
BU of 2lze by Molmil
Ligase 10C
Descriptor: ZINC ION, a primordial catalytic fold generated by in vitro evolution
Authors:Chao, F, Morelli, A, Haugner, J, Churchfield, L, Hagmann, L, Shi, L, Masterson, L, Sarangi, R, Veglia, G, Seelig, B.
Deposit date:2012-10-01
Release date:2012-10-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and dynamics of a primordial catalytic fold generated by in vitro evolution.
Nat.Chem.Biol., 9, 2013
7QSX
DownloadVisualize
BU of 7qsx by Molmil
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8 complex
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit
Authors:Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
Deposit date:2022-01-14
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evolution of increased complexity and specificity at the dawn of form I Rubiscos.
Science, 378, 2022
7QT1
DownloadVisualize
BU of 7qt1 by Molmil
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex with substitution e170N
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit, ...
Authors:Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
Deposit date:2022-01-14
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evolution of increased complexity and specificity at the dawn of form I Rubiscos.
Science, 378, 2022
7QSY
DownloadVisualize
BU of 7qsy by Molmil
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8S8 complex
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit, ...
Authors:Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
Deposit date:2022-01-14
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evolution of increased complexity and specificity at the dawn of form I Rubiscos.
Science, 378, 2022
7QSZ
DownloadVisualize
BU of 7qsz by Molmil
Non-obligately L8S8-complex forming RubisCO derived from ancestral sequence reconstruction and rational engineering in L8 complex with substitution e170N
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RubisCO large subunit
Authors:Zarzycki, J, Schulz, L, Erb, T.J, Hochberg, G.K.A.
Deposit date:2022-01-14
Release date:2022-10-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Evolution of increased complexity and specificity at the dawn of form I Rubiscos.
Science, 378, 2022
1TOE
DownloadVisualize
BU of 1toe by Molmil
Unliganded structure of Hexamutant + A293D mutant of E. coli aspartate aminotransferase
Descriptor: Aspartate aminotransferase, SULFATE ION
Authors:Chow, M.A, McElroy, K.E, Corbett, K.D, Berger, J.M, Kirsch, J.F.
Deposit date:2004-06-14
Release date:2004-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Narrowing substrate specificity in a directly evolved enzyme: the A293D mutant of aspartate aminotransferase
Biochemistry, 43, 2004
1KNU
DownloadVisualize
BU of 1knu by Molmil
LIGAND BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA IN COMPLEX WITH A SYNTHETIC AGONIST
Descriptor: (S)-3-(4-(2-CARBAZOL-9-YL-ETHOXY)-PHENYL)-2-ETHOXY-PROPIONIC ACID, PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA
Authors:Svensson, L.A, Mortensen, S.B, Fleckner, J, Woeldike, H.F.
Deposit date:2001-12-19
Release date:2002-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Novel tricyclic-alpha-alkyloxyphenylpropionic acids: dual PPARalpha/gamma agonists with hypolipidemic and antidiabetic activity
J.MED.CHEM., 45, 2002
3MOC
DownloadVisualize
BU of 3moc by Molmil
Investigation of global and local effects of radiation damage on porcine pancreatic elastase. Eighth stage of radiation damage
Descriptor: Chymotrypsin-like elastase family member 1, SODIUM ION, SULFATE ION
Authors:Petrova, T, Ginell, S, Kim, Y, Joachimiak, G, Joachimiak, A.
Deposit date:2010-04-22
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:X-ray-induced deterioration of disulfide bridges at atomic resolution.
Acta Crystallogr.,Sect.D, 66, 2010
4MA1
DownloadVisualize
BU of 4ma1 by Molmil
Unliganded 3 crystal structure of S25-26 Fab
Descriptor: DI(HYDROXYETHYL)ETHER, POTASSIUM ION, S25-26 Fab (IgG1k) heavy chain, ...
Authors:Haji-Ghassemi, O, Evans, S.V.
Deposit date:2013-08-15
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Groove-type Recognition of Chlamydiaceae-specific Lipopolysaccharide Antigen by a Family of Antibodies Possessing an Unusual Variable Heavy Chain N-Linked Glycan.
J.Biol.Chem., 289, 2014

223166

数据于2024-07-31公开中

PDB statisticsPDBj update infoContact PDBjnumon