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7OER
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BU of 7oer by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-(2,2-diphenylethyl)-1,5-dimethyl-N-(2-(methylamino)-2-oxoethyl)-6-oxo-1,6-dihydropyridine-3-carboxamide
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, N-(2,2-diphenylethyl)-1,5-dimethyl-N-[2-(methylamino)-2-oxidanylidene-ethyl]-6-oxidanylidene-pyridine-3-carboxamide
Authors:Chung, C.
Deposit date:2021-05-03
Release date:2021-07-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Discovery of a Highly Selective BET BD2 Inhibitor from a DNA-Encoded Library Technology Screening Hit.
J.Med.Chem., 64, 2021
2UYC
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BU of 2uyc by Molmil
HhaI DNA methyltransferase R163N mutant complex with 13mer GCGC-GMGC oligonucleotide and SAH
Descriptor: 5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP *CP*C)-3', 5'-D(*TP*GP*GP*AP*TP*GP*5CMP*GP*CP*TP *GP*AP*C)-3', GLYCEROL, ...
Authors:Daujotyte, D, Grazulis, S.
Deposit date:2007-04-03
Release date:2008-05-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:HhaI DNA Methyltransferase R163N Mutant Complex with 13mer Gcgc-Gmgc Oligonucleotide and Sah
To be Published
6T5T
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BU of 6t5t by Molmil
Crystal structure of Archaeoglobus fulgidus Argonaute protein with cognate DNA oligoduplex 5'-pATTGTGGCCACAAT
Descriptor: 5'-D(*AP*TP*TP*GP*TP*GP*GP*CP*CP*AP*CP*AP*AP*TP)-3', BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Grazulis, S, Zaremba, M.
Deposit date:2019-10-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7003 Å)
Cite:Crystal structure of Archaeoglobus fulgidus Argonaute protein with cognate DNA oligoduplex 5'-pATTGTGGCCACAAT
To be published
6WKK
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BU of 6wkk by Molmil
Phage G gp27 major capsid proteins and gp26 decoration proteins
Descriptor: Gp26 capsid decoration protein, Gp27 major capsid protein
Authors:Monroe, L, Gonzalez, B, Jiang, W, Kihara, D.
Deposit date:2020-04-16
Release date:2020-06-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Phage G Structure at 6.1 angstrom Resolution, Condensed DNA, and Host Identity Revision to a Lysinibacillus.
J.Mol.Biol., 432, 2020
1KKW
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BU of 1kkw by Molmil
NMR Solution Structure of d(CCATGCGTGG)2, G-T mismatch structure
Descriptor: 5'-D(*CP*CP*AP*TP*GP*CP*GP*TP*GP*G)-3'
Authors:Isaacs, R.J, Spielmann, H.P.
Deposit date:2001-12-10
Release date:2002-06-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.
J.Mol.Biol., 319, 2002
7OET
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BU of 7oet by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1,5-dimethyl-N-(2-(methylamino)-2-oxo-1-(tetrahydro-2H-pyran-4-yl)ethyl)-6-oxo-N-(2-phenyl-2-(pyridin-2-yl)ethyl)-1,6-dihydropyridine-3-carboxamide
Descriptor: 1,2-ETHANEDIOL, 1,5-dimethyl-~{N}-[(1~{R})-2-(methylamino)-1-(oxan-4-yl)-2-oxidanylidene-ethyl]-6-oxidanylidene-~{N}-[(2~{S})-2-phenyl-2-pyridin-2-yl-ethyl]pyridine-3-carboxamide, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
Authors:Chung, C.
Deposit date:2021-09-21
Release date:2021-10-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Discovery of a Highly Selective BET BD2 Inhibitor from a DNA-Encoded Library Technology Screening Hit.
J.Med.Chem., 64, 2021
7T91
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BU of 7t91 by Molmil
Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region
Descriptor: Isoform 2 of Zinc finger protein GLI1, ZINC ION
Authors:Wu, M, Zhang, S, Augelli-Szanfran, C.E, Boohaker, R.J.
Deposit date:2021-12-17
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region
To Be Published
3UWX
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BU of 3uwx by Molmil
Crystal structure of UvrA-UvrB complex
Descriptor: Excinuclease ABC, A subunit, UvrABC system protein B, ...
Authors:Pakotiprapha, D, Jeruzalmi, D.
Deposit date:2011-12-03
Release date:2012-02-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.398 Å)
Cite:Structure and mechanism of the UvrA-UvrB DNA damage sensor.
Nat.Struct.Mol.Biol., 19, 2012
5JUI
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BU of 5jui by Molmil
domain-swapped dimer of the the KRT10-binding region (BR) of PsrP
Descriptor: Cell wall surface anchor family protein, GLYCEROL, SODIUM ION
Authors:Schulte, T, Mikaelsson, C, Achour, A.
Deposit date:2016-05-10
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The BR domain of PsrP interacts with extracellular DNA to promote bacterial aggregation; structural insights into pneumococcal biofilm formation.
Sci Rep, 6, 2016
8AA5
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BU of 8aa5 by Molmil
Cryo-EM structure of the strand transfer complex of the TnsB transposase (type V-K CRISPR-associated transposon)
Descriptor: LE_PolyA, LE_Target, RE_PolyA, ...
Authors:Tenjo-Castano, F, Sofos, N, Lopez-Mendez, B, Stutzke, L.S, Fuglsang, A, Stella, S, Montoya, G.
Deposit date:2022-06-30
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Structure of the TnsB transposase-DNA complex of type V-K CRISPR-associated transposon.
Nat Commun, 13, 2022
2JES
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BU of 2jes by Molmil
Portal protein (gp6) from bacteriophage SPP1
Descriptor: CALCIUM ION, MERCURY (II) ION, PORTAL PROTEIN, ...
Authors:Lebedev, A.A, Krause, M.H, Isidro, A.L, Vagin, A.A, Orlova, E.V, Turner, J, Dodson, E.J, Tavares, P, Antson, A.A.
Deposit date:2007-01-21
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Framework for DNA Translocation Via the Viral Portal Protein
Embo J., 26, 2007
6IMA
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BU of 6ima by Molmil
Crystal Structure of ALKBH1 without alpha-1 (N37-C369)
Descriptor: CITRIC ACID, Nucleic acid dioxygenase ALKBH1
Authors:Zhang, M, Yang, S, Zhao, W, Li, H.
Deposit date:2018-10-22
Release date:2020-01-22
Last modified:2020-04-08
Method:X-RAY DIFFRACTION (2.593 Å)
Cite:Mammalian ALKBH1 serves as an N6-mA demethylase of unpairing DNA.
Cell Res., 30, 2020
1CQO
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BU of 1cqo by Molmil
NMR STRUCTURE OF THE PALINDROMIC DNA DECAMER D(GCGTTAACGC)2
Descriptor: 5'-d(*GP*CP*GP*TP*TP*AP*AP*CP*GP*C)-3'
Authors:Smith, J.A, Tsui, V.T, Chazin, W.J, Case, D.A.
Deposit date:1999-08-09
Release date:1999-08-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Structure of the Palindromic DNA Decamer d(GCGTTAACGC)2
To be Published
5DQZ
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BU of 5dqz by Molmil
Crystal Structure of Cas-DNA-PAM complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (36-MER), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
3U7E
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BU of 3u7e by Molmil
Crystal structure of mPNKP catalytic fragment (D170A)
Descriptor: Bifunctional polynucleotide phosphatase/kinase, GLYCEROL, MAGNESIUM ION, ...
Authors:Coquelle, N, Havali, Z, Bernstein, N, Green, R, Glover, J.N.M.
Deposit date:2011-10-13
Release date:2011-12-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the phosphatase activity of polynucleotide kinase/phosphatase on single- and double-stranded DNA substrates.
Proc.Natl.Acad.Sci.USA, 108, 2011
4KG9
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BU of 4kg9 by Molmil
Crystal Structure Of USP7-NTD with MCM-BP
Descriptor: Mini-chromosome maintenance complex-binding protein, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Saridakis, V, Luthra, N.
Deposit date:2013-04-29
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A role for USP7 in DNA replication.
Mol.Cell.Biol., 34, 2014
4Q0Z
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BU of 4q0z by Molmil
The catalytic core of Rad2 in complex with DNA substrate (complex III)
Descriptor: CALCIUM ION, DNA (5'-D(*TP*CP*TP*GP*AP*GP*AP*CP*AP*AP*GP*GP*GP*AP*GP*CP*T)-3'), DNA (5'-D(*TP*GP*CP*TP*CP*CP*CP*TP*TP*GP*TP*CP*TP*CP*AP*GP*T)-3'), ...
Authors:Mietus, M, Nowak, E, Jaciuk, M, Kustosz, P, Nowotny, M.
Deposit date:2014-04-02
Release date:2014-08-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:Crystal structure of the catalytic core of Rad2: insights into the mechanism of substrate binding.
Nucleic Acids Res., 42, 2014
3BD4
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BU of 3bd4 by Molmil
Crystal structure of single domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CADMIUM ION, catalytic antibody
Authors:Park, S.K, Kim, J.S.
Deposit date:2007-11-14
Release date:2008-04-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of single-domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals
Proteins, 71, 2008
1KKV
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BU of 1kkv by Molmil
NMR Solution Structure of d(CCACGCGTGG)2, parent to G-T mismatch structure
Descriptor: 5'-D(*CP*CP*AP*CP*GP*CP*GP*TP*GP*G)-3'
Authors:Isaacs, R.J, Spielmann, H.P.
Deposit date:2001-12-10
Release date:2002-06-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.
J.Mol.Biol., 319, 2002
2DDQ
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BU of 2ddq by Molmil
Crystal Structure of the Fab fragment of a R310 antibody complexed with (R)-HNE-histidine adduct
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-ACETYL-1-[(2R,3S,5R)-5-HYDROXY-2-PENTYLTETRAHYDROFURAN-3-YL]-L-HISTIDINE, R310 antibody heavy chain, ...
Authors:Ito, S.
Deposit date:2006-02-02
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Bispecific abs against modified protein and DNA with oxidized lipids
Proc.Natl.Acad.Sci.Usa, 103, 2006
4WB7
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BU of 4wb7 by Molmil
Crystal structure of a chimeric fusion of human DnaJ (Hsp40) and cAMP-dependent protein kinase A (catalytic alpha subunit)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, PKI (5-24), ...
Authors:Cheung, J, Ginter, C, Cassidy, M, Franklin, M.C, Rudolph, M.J, Hendrickson, W.A.
Deposit date:2014-09-02
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into mis-regulation of protein kinase A in human tumors.
Proc.Natl.Acad.Sci.USA, 112, 2015
4E8U
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BU of 4e8u by Molmil
Crystal structure of Arabidopsis IDN2 XS domain along with a small segment of adjacent coiled-coil region
Descriptor: Putative uncharacterized protein T8P19.180, SULFATE ION
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2012-03-20
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 109, 2012
7TMY
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BU of 7tmy by Molmil
Structure of Mouse Importin alpha NEIL3 NLS Peptide Complex
Descriptor: Importin subunit alpha-1, Nuclear Localization Signal from Endonuclease 8-like 3
Authors:Moraes, I.R, de Oliveira, H.C, Fontes, M.R.M.
Deposit date:2022-01-20
Release date:2023-08-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis of nuclear transport for NEIL DNA glycosylases mediated by importin-alpha.
Biochim Biophys Acta Proteins Proteom, 1872, 2023
2R6E
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BU of 2r6e by Molmil
Crystal Form B2
Descriptor: Replicative helicase, SULFATE ION
Authors:Bailey, S, Eliason, W.K, Steitz, T.A.
Deposit date:2007-09-05
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (5.019 Å)
Cite:Structure of hexameric DnaB helicase and its complex with a domain of DnaG primase
Science, 318, 2007
5TS1
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BU of 5ts1 by Molmil
Crystal structure of MHC-I H2-KD complexed with peptides of Mycobacterial tuberculosis (YYQSGLSIV)
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Jiang, J, Natarajan, K, Margulies, D.
Deposit date:2016-10-27
Release date:2018-05-09
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:MHC-restricted Ag85B-specific CD8+T cells are enhanced by recombinant BCG prime and DNA boost immunization in mice.
Eur.J.Immunol., 2019

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数据于2024-10-09公开中

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