Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GOA
DownloadVisualize
BU of 6goa by Molmil
Structural basis for OXA-48 dimerization - R189A mutant
Descriptor: Beta-lactamase, CHLORIDE ION
Authors:Lund, B.A, Thomassen, A.M, Leiros, H.K.S.
Deposit date:2018-06-01
Release date:2018-07-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The biological assembly of OXA-48 reveals a dimer interface with high charge complementarity and very high affinity.
FEBS J., 285, 2018
5Z7B
DownloadVisualize
BU of 5z7b by Molmil
Crystal structure of the VanR transcription factor in complex with vanillate
Descriptor: 4-HYDROXY-3-METHOXYBENZOATE, PadR family transcriptional regulator
Authors:Kwak, Y.M, Park, S.C, Yoon, S.I.
Deposit date:2018-01-28
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the VanR transcription factor and the role of its unique alpha-helix in effector recognition.
FEBS J., 285, 2018
5ZUH
DownloadVisualize
BU of 5zuh by Molmil
Solution structure of RRM domain of La protein from Trypanosoma brucei
Descriptor: RNA binding protein La-like protein
Authors:Shan, F.Z.
Deposit date:2018-05-07
Release date:2019-05-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A telomerase subunit homolog La protein from Trypanosoma brucei plays an essential role in ribosomal biogenesis.
Febs J., 286, 2019
6A6K
DownloadVisualize
BU of 6a6k by Molmil
Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000
Descriptor: 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol, Estrogen-related receptor gamma
Authors:Yoon, H, Kim, J, Chin, J, Cho, S.J, Song, J.
Deposit date:2018-06-28
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Estrogen-Related Receptor-gamma Inverse Agonists To Restore the Sodium Iodide Symporter Function in Anaplastic Thyroid Cancer.
J. Med. Chem., 62, 2019
5BYY
DownloadVisualize
BU of 5byy by Molmil
ERK5 IN COMPLEX WITH SMALL MOLECULE
Descriptor: 2-{[2-ethoxy-4-(4-hydroxypiperidin-1-yl)phenyl]amino}-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Mitogen-activated protein kinase 7
Authors:Chen, H, Tucker, J, Wang, X, Gavine, P.R, Philips, C, Augustin, M.A, Schreiner, P, Steinbacher, S, Preston, M, Ogg, D.
Deposit date:2015-06-11
Release date:2016-05-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Discovery of a novel allosteric inhibitor-binding site in ERK5: comparison with the canonical kinase hinge ATP-binding site.
Acta Crystallogr D Struct Biol, 72, 2016
7L5F
DownloadVisualize
BU of 7l5f by Molmil
Crystal Structure of N-(2-oxocyclobutyl) decanamide Bound AiiA-Co
Descriptor: 4-(decanoylamino)butanoic acid, COBALT (II) ION, GLYCEROL, ...
Authors:Mascarenhas, R.N, Liu, D.
Deposit date:2020-12-22
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Cyclobutanone Inhibitor of Cobalt-Functionalized Metallo-gamma-Lactonase AiiA with Cyclobutanone Ring Opening in the Active Site.
Acs Omega, 6, 2021
1XFT
DownloadVisualize
BU of 1xft by Molmil
Synchrotron X-ray Powder Diffraction Study of Hexagonal Turkey Egg-white Lysozyme
Descriptor: Lysozyme C
Authors:Margiolaki, I, Wright, J.P.
Deposit date:2004-09-15
Release date:2005-04-05
Last modified:2024-11-20
Method:POWDER DIFFRACTION (3.35 Å)
Cite:Synchrotron X-ray powder diffraction study of hexagonal turkey egg-white lysozyme.
Acta Crystallogr.,Sect.D, 61, 2005
6A83
DownloadVisualize
BU of 6a83 by Molmil
Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli complex with Zn
Descriptor: Phosphoethanolamine transferase EptC, SODIUM ION, ZINC ION
Authors:Zhao, Y.Q, Gu, Y.J, Cheng, W.
Deposit date:2018-07-06
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Structural and mechanistic insights into polymyxin resistance mediated by EptC originating from Escherichia coli.
FEBS J., 286, 2019
5WT4
DownloadVisualize
BU of 5wt4 by Molmil
L-Cysteine-PLP intermediate of NifS from Helicobacter pylori
Descriptor: Cysteine desulfurase IscS, ISOPROPYL ALCOHOL, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
Authors:Fujishiro, T, Nakamura, R, Takahashi, T.
Deposit date:2016-12-09
Release date:2017-12-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 2019
6A9U
DownloadVisualize
BU of 6a9u by Molmil
Crystal strcture of Icp55 from Saccharomyces cerevisiae bound to apstatin inhibitor
Descriptor: Intermediate cleaving peptidase 55, MANGANESE (II) ION, apstatin
Authors:Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-07-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6AEQ
DownloadVisualize
BU of 6aeq by Molmil
Crystal structure of the ssDNA-binding domain of DnaT from Salmonella enterica Serovar Typhimurium LT2
Descriptor: Primosomal protein 1
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2018-08-06
Release date:2019-03-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2518084 Å)
Cite:Crystal structure of the C-terminal domain of the primosomal DnaT protein: Insights into a new oligomerization mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
6A9V
DownloadVisualize
BU of 6a9v by Molmil
Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 42 residues deletion)
Descriptor: GLYCINE, Intermediate cleaving peptidase 55, MANGANESE (II) ION, ...
Authors:Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-07-16
Release date:2019-01-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6AH6
DownloadVisualize
BU of 6ah6 by Molmil
M500V mutant of Coronin coiled coil domain
Descriptor: Coronin-like protein
Authors:Ansari, A, Karade, S.S, Pratap, J.V.
Deposit date:2018-08-16
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular and structural analysis of a mechanical transition of helices in the L. donovani coronin coiled-coil domain.
Int.J.Biol.Macromol., 143, 2020
6ADO
DownloadVisualize
BU of 6ado by Molmil
LdCoroCC mutant-I486A
Descriptor: Coronin-like protein
Authors:Karade, S.S, Ansari, A, Pratap, J.V.
Deposit date:2018-08-01
Release date:2019-10-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Molecular and structural analysis of a mechanical transition of helices in the L. donovani coronin coiled-coil domain.
Int.J.Biol.Macromol., 143, 2020
6A82
DownloadVisualize
BU of 6a82 by Molmil
Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli
Descriptor: Phosphoethanolamine transferase EptC, SODIUM ION
Authors:Zhao, Y.Q, Gu, Y.J, Cheng, W.
Deposit date:2018-07-06
Release date:2018-12-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mechanistic insights into polymyxin resistance mediated by EptC originating from Escherichia coli.
FEBS J., 286, 2019
2YZ3
DownloadVisualize
BU of 2yz3 by Molmil
Crystallographic Investigation of Inhibition Mode of the VIM-2 Metallo-beta-lactamase from Pseudomonas aeruginosa with Mercaptocarboxylate Inhibitor
Descriptor: (S)-2-(MERCAPTOMETHYL)-5-PHENYLPENTANOIC ACID, Metallo-beta-lactamase, SULFATE ION, ...
Authors:Yamaguchi, Y, Yamagata, Y, Arakawa, Y, Kurosaki, H.
Deposit date:2007-05-02
Release date:2008-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic investigation of the inhibition mode of a VIM-2 metallo-beta-lactamase from Pseudomonas aeruginosa by a mercaptocarboxylate inhibitor.
J.Med.Chem., 50, 2007
1Y4O
DownloadVisualize
BU of 1y4o by Molmil
Solution structure of a mouse cytoplasmic Roadblock/LC7 dynein light chain
Descriptor: Dynein light chain 2A, cytoplasmic
Authors:Song, J, Tyler, R.C, Lee, M.S, Tyler, E.M, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-12-01
Release date:2005-01-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of isoform 1 of Roadblock/LC7, a light chain in the dynein complex.
J.Mol.Biol., 354, 2005
6PRC
DownloadVisualize
BU of 6prc by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (DG-420314 (TRIAZINE) COMPLEX)
Descriptor: 15-cis-1,2-dihydroneurosporene, 2-CHLORO-4-ETHYLAMINO-6-(S(-)-2'-CYANO-4-BUTYLAMINO)-1,3,5-TRIAZINE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D, Michel, H.
Deposit date:1997-07-31
Release date:1999-04-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid.
J.Mol.Biol., 286, 1999
3I3Z
DownloadVisualize
BU of 3i3z by Molmil
Human insulin
Descriptor: Insulin A chain, Insulin B chain
Authors:Timofeev, V.I, Bezuglov, V.V, Miroshnikov, K.A, Cuprov-Netochin, R.N, Samigina, V.R, Kuranova, I.P.
Deposit date:2009-07-01
Release date:2010-01-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray investigation of gene-engineered human insulin crystallized from a solution containing polysialic acid.
Acta Crystallogr.,Sect.F, 66, 2010
5DXV
DownloadVisualize
BU of 5dxv by Molmil
Crystal structure of Rethreaded DHFR
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Faham, S.
Deposit date:2015-09-24
Release date:2016-06-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protein rethreading: A novel approach to protein design.
Sci Rep, 6, 2016
7BR9
DownloadVisualize
BU of 7br9 by Molmil
Crystal structure of mus musculus IRG1
Descriptor: Cis-aconitate decarboxylase
Authors:Park, H.H, Chun, H.L.
Deposit date:2020-03-27
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The crystal structure of mouse IRG1 suggests that cis-aconitate decarboxylase has an open and closed conformation.
Plos One, 15, 2020
1WD0
DownloadVisualize
BU of 1wd0 by Molmil
Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
Descriptor: 5'-D(*CP*CP*TP*AP*TP*AP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
Authors:Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
Deposit date:2004-05-10
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
7XAX
DownloadVisualize
BU of 7xax by Molmil
Crystal structure of SARS coronavirus main protease in complex with Baicalei
Descriptor: 3C-like proteinase nsp5, 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one
Authors:Zhou, X.L, Li, J, Zhang, J.
Deposit date:2022-03-19
Release date:2023-03-22
Last modified:2025-09-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of SARS-CoV 3C-like protease with baicalein.
Biochem.Biophys.Res.Commun., 611, 2022
5NPU
DownloadVisualize
BU of 5npu by Molmil
Inferred ancestral pyruvate decarboxylase
Descriptor: ANC27, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Buddrus, L, Crennell, S.J, Leak, D.J, Danson, M.J, Andrews, E.S.V, Arcus, V.L.
Deposit date:2017-04-19
Release date:2018-03-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of an inferred ancestral bacterial pyruvate decarboxylase.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6FCB
DownloadVisualize
BU of 6fcb by Molmil
Human Methionine Adenosyltransferase II mutant (P115G)
Descriptor: (DIPHOSPHONO)AMINOPHOSPHONIC ACID, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Panmanee, J, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2017-12-20
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Control and regulation of S-Adenosylmethionine biosynthesis by the regulatory beta subunit and quinolone-based compounds.
Febs J., 286, 2019

242842

数据于2025-10-08公开中

PDB statisticsPDBj update infoContact PDBjnumon