Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QBY
DownloadVisualize
BU of 3qby by Molmil
Crystal structure of the PWWP domain of human Hepatoma-derived growth factor 2
Descriptor: H4K20me3 Histone H4 Peptide, Hepatoma-derived growth factor-related protein 2, SULFATE ION, ...
Authors:Zeng, H, Tempel, W, Amaya, M.F, Adams-Cioaba, M.A, Mackenzie, F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2011-01-14
Release date:2011-02-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Histone Binding Ability Characterizations of Human PWWP Domains.
Plos One, 6, 2011
2P57
DownloadVisualize
BU of 2p57 by Molmil
GAP domain of ZNF289, an ID1-regulated zinc finger protein
Descriptor: GTPase-activating protein ZNF289, UNKNOWN ATOM OR ION, ZINC ION
Authors:Tong, Y, Dimov, S, Shen, L, Zhu, H, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-03-14
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:GAP domain of ZNF289, an ID1-regulated zinc finger protein
To be Published
3Q8K
DownloadVisualize
BU of 3q8k by Molmil
Crystal Structure of Human Flap Endonuclease FEN1 (WT) in complex with product 5'-flap DNA, SM3+, and K+
Descriptor: DNA (5'-D(*AP*CP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*AP*CP*TP*CP*TP*GP*CP*CP*TP*CP*AP*AP*GP*AP*CP*GP*GP*T)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*CP*AP*GP*AP*GP*T)-3'), ...
Authors:Tsutakawa, S.E, Classen, S, Chapados, B.R, Arvai, A, Finger, D.L, Guenther, G, Tomlinson, C.G, Thompson, P, Sarker, A.H, Shen, B, Cooper, P.K, Grasby, J.A, Tainer, J.A.
Deposit date:2011-01-06
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2001 Å)
Cite:Human Flap Endonuclease Structures, DNA Double-Base Flipping, and a Unified Understanding of the FEN1 Superfamily.
Cell(Cambridge,Mass.), 145, 2011
3QCT
DownloadVisualize
BU of 3qct by Molmil
Crystal structure of the humanized apo LT3015 anti-lysophosphatidic acid antibody Fab fragment
Descriptor: LT3015 antibody Fab fragment, heavy chain, light chain, ...
Authors:Fleming, J.K, Wojciak, J.M, Campbell, M.-A, Huxford, T.
Deposit date:2011-01-17
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1493 Å)
Cite:Biochemical and structural characterization of lysophosphatidic Acid binding by a humanized monoclonal antibody.
J.Mol.Biol., 408, 2011
3GSN
DownloadVisualize
BU of 3gsn by Molmil
Crystal structure of the public RA14 TCR in complex with the HCMV dominant NLV/HLA-A2 epitope
Descriptor: Beta-2-microglobulin, CHLORIDE ION, HCMV pp65 fragment 495-503 (NLVPMVATV), ...
Authors:Gras, S, Saulquin, X, Reiser, J.-B, Debeaupuis, E, Echasserieau, K, Kissenpfennig, A, Legoux, F, Chouquet, A, Le Gorrec, M, Machillot, P, Neveu, B, Thielens, N, Malissen, B, Bonneville, M, Housset, D.
Deposit date:2009-03-27
Release date:2009-08-04
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural bases for the affinity-driven selection of a public TCR against a dominant human cytomegalovirus epitope.
J.Immunol., 183, 2009
4J5E
DownloadVisualize
BU of 4j5e by Molmil
Human Cyclophilin D Complexed with an Inhibitor
Descriptor: 1-(4-aminobenzyl)-3-{2-[(2R)-2-(2-methoxyphenyl)pyrrolidin-1-yl]-2-oxoethyl}urea, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Authors:Gelin, M, Colliandre, L, Bessin, Y, Guichou, J.F.
Deposit date:2013-02-08
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
3GND
DownloadVisualize
BU of 3gnd by Molmil
Crystal Structure of E. coli LsrF in complex with Ribulose-5-phosphate
Descriptor: Aldolase lsrF, RIBULOSE-5-PHOSPHATE
Authors:Miller, S.T, Diaz, Z.C.
Deposit date:2009-03-17
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
4J6I
DownloadVisualize
BU of 4j6i by Molmil
Discovery of thiazolobenzoxepin PI3-kinase inhibitors that spare the PI3-kinase beta isoform
Descriptor: 2-methyl-1-(4-{2-[1-(2,2,2-trifluoroethyl)-1H-1,2,4-triazol-5-yl]-4,5-dihydro[1]benzoxepino[5,4-d][1,3]thiazol-8-yl}-1H-pyrazol-1-yl)propan-2-ol, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Murray, J.M, Rouge, L, Wu, P.
Deposit date:2013-02-11
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discovery of thiazolobenzoxepin PI3-kinase inhibitors that spare the PI3-kinase beta isoform.
Bioorg.Med.Chem.Lett., 23, 2013
4J76
DownloadVisualize
BU of 4j76 by Molmil
Crystal Structure of a parasite tRNA synthetase, ligand-free
Descriptor: GLYCEROL, Tryptophanyl-tRNA synthetase
Authors:Koh, C.Y, Kim, J.E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-02-12
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structures of Plasmodium falciparum cytosolic tryptophanyl-tRNA synthetase and its potential as a target for structure-guided drug design.
Mol.Biochem.Parasitol., 189, 2013
4J7T
DownloadVisualize
BU of 4j7t by Molmil
Human LTC4 synthase in complex with product analogs - implications for enzyme catalysis
Descriptor: D-gamma-glutamyl-S-(4-phenylbutyl)-L-cysteinylglycine, Leukotriene C4 synthase, NICKEL (II) ION, ...
Authors:Niegowski, D, Rinaldo-Matthis, A, Haeggstrom, J.Z.
Deposit date:2013-02-14
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.203 Å)
Cite:Crystal Structures of Leukotriene C4 Synthase in Complex with Product Analogs: IMPLICATIONS FOR THE ENZYME MECHANISM.
J.Biol.Chem., 289, 2014
3GU0
DownloadVisualize
BU of 3gu0 by Molmil
Promiscuous Substrate Recognition in Folding and Assembly Activities of the Trigger Factor Chaperone
Descriptor: Trigger factor
Authors:Martinez-Hackert, E, Hendrickson, W.A.
Deposit date:2009-03-28
Release date:2009-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone
Cell(Cambridge,Mass.), 138, 2009
2P98
DownloadVisualize
BU of 2p98 by Molmil
E. coli methionine aminopeptidase monometalated with inhibitor YE7
Descriptor: IMIDAZO[2,1-A]ISOQUINOLINE-2-CARBOHYDRAZIDE, MANGANESE (II) ION, Methionine aminopeptidase, ...
Authors:Ye, Q.
Deposit date:2007-03-24
Release date:2007-11-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition of Monometalated Methionine Aminopeptidase: Inhibitor Discovery and Crystallographic Analysis.
J.Med.Chem., 50, 2007
3QG1
DownloadVisualize
BU of 3qg1 by Molmil
Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, V-type ATP synthase alpha chain
Authors:Ragunathan, P, Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-24
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
3GRK
DownloadVisualize
BU of 3grk by Molmil
Crystal structure of short chain dehydrogenase reductase SDR glucose-ribitol dehydrogenase from Brucella melitensis
Descriptor: Enoyl-(acyl-carrier-protein) reductase (NADH)
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-25
Release date:2009-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of short chain dehydrogenase reductase SDR glucose-ribitol dehydrogenase from Brucella melitensis
To be Published
3GSU
DownloadVisualize
BU of 3gsu by Molmil
Crystal structure of the binary complex between HLA-A2 and HCMV NLV-M5T peptide variant
Descriptor: Beta-2-microglobulin, HCMV pp65 fragment 495-503, variant M5T (NLVPTVATV), ...
Authors:Reiser, J.-B, Saulquin, X, Gras, S, Debeaupuis, E, Echasserieau, K, Kissenpfennig, A, Legoux, F, Chouquet, A, Le Gorrec, M, Machillot, P, Neveu, B, Thielens, N, Malissen, B, Bonneville, M, Housset, D.
Deposit date:2009-03-27
Release date:2009-08-04
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural bases for the affinity-driven selection of a public TCR against a dominant human cytomegalovirus epitope.
J.Immunol., 183, 2009
3GT6
DownloadVisualize
BU of 3gt6 by Molmil
Crystal Structure of the hspA from Xanthomonas axonopodis
Descriptor: Low molecular weight heat shock protein
Authors:Hilario, E, Medrano, F.J, Bertolini, M.C.
Deposit date:2009-03-27
Release date:2011-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of Xanthomonas small heat shock protein provide a structural basis for an active molecular chaperone oligomer.
J.Mol.Biol., 408, 2011
3GVJ
DownloadVisualize
BU of 3gvj by Molmil
Crystal structure of an endo-neuraminidaseNF mutant
Descriptor: Endo-N-acetylneuraminidase, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid
Authors:Schulz, E.C, Dickmanns, A, Ficner, R.
Deposit date:2009-03-31
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural basis for the recognition and cleavage of polysialic acid by the bacteriophage K1F tailspike protein EndoNF.
J.Mol.Biol., 397, 2010
2PC2
DownloadVisualize
BU of 2pc2 by Molmil
Lysozyme Cocrystallized with Tris-dipicolinate Eu complex
Descriptor: CHLORIDE ION, EUROPIUM ION, Lysozyme C, ...
Authors:Pompidor, G, Vicat, J, Kahn, R.
Deposit date:2007-03-29
Release date:2008-04-01
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.538 Å)
Cite:A dipicolinate lanthanide complex for solving protein structures using anomalous diffraction
Acta Crystallogr.,Sect.D, 66, 2010
3GUH
DownloadVisualize
BU of 3guh by Molmil
Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM
Descriptor: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 1,5-anhydro-D-glucitol, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Sheng, F, Geiger, J.
Deposit date:2009-03-30
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:The Crystal Structures of the Open and Catalytically Competent Closed Conformation of Escherichia coli Glycogen Synthase.
J.Biol.Chem., 284, 2009
4JWP
DownloadVisualize
BU of 4jwp by Molmil
Crystal structure of Ribosomal-protein-alanine N-acetyltransferase from Brucella melitensis in complex with Acetyl CoA
Descriptor: ACETYL COENZYME *A, CALCIUM ION, CHLORIDE ION, ...
Authors:SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-03-27
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Ribosomal-protein-alanine N-acetyltransferase from Brucella melitensis in complex with Acetyl CoA
TO BE PUBLISHED
3QK8
DownloadVisualize
BU of 3qk8 by Molmil
Crystal structure of enoyl-coA hydratase EchA15 from Mycobacterium marinum in complex with an unknown ligand
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Enoyl-CoA hydratase EchA15, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-01-31
Release date:2011-02-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4JD4
DownloadVisualize
BU of 4jd4 by Molmil
Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-065
Descriptor: 5-{2-[2-(hydroxymethyl)phenyl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ...
Authors:Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K.
Deposit date:2013-02-23
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-065
To be Published
2PE7
DownloadVisualize
BU of 2pe7 by Molmil
Thaumatin from Thaumatococcus Danielli in complex with tris-dipicolinate Europium
Descriptor: EUROPIUM ION, L(+)-TARTARIC ACID, PYRIDINE-2,6-DICARBOXYLIC ACID, ...
Authors:Pompidor, G, Vicat, J, Kahn, R.
Deposit date:2007-04-02
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:A dipicolinate lanthanide complex for solving protein structures using anomalous diffraction.
Acta Crystallogr.,Sect.D, 66, 2010
3QMC
DownloadVisualize
BU of 3qmc by Molmil
Structural Basis of Selective Binding of Nonmethylated CpG Islands by the CXXC Domain of CFP1
Descriptor: 5'-D(*GP*CP*CP*AP*CP*CP*GP*CP*TP*GP*GP*C)-3', 5'-D(*GP*CP*CP*AP*GP*CP*GP*GP*TP*GP*GP*C)-3', CpG-binding protein, ...
Authors:Lam, R, Xu, C, Bian, C.B, Kania, J, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2011-02-04
Release date:2011-02-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural basis for selective binding of non-methylated CpG islands by the CFP1 CXXC domain.
Nat Commun, 2, 2011
4J5D
DownloadVisualize
BU of 4j5d by Molmil
Human Cyclophilin D Complexed with an Inhibitor
Descriptor: 1-(4-aminobenzyl)-3-{2-[(2R)-2-(2-bromophenyl)pyrrolidin-1-yl]-2-oxoethyl}urea, Peptidyl-prolyl cis-trans isomerase F, mitochondrial
Authors:Gelin, M, Colliandre, L, Bessin, Y, Guichou, J.F.
Deposit date:2013-02-08
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon