Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8XM5
DownloadVisualize
BU of 8xm5 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron EG.5 spike protein(6P), RBD-closed state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Li, L.J, Gu, Y.H, Shi, K.Y, Qi, J.X, Gao, G.F.
Deposit date:2023-12-27
Release date:2024-07-03
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8XNF
DownloadVisualize
BU of 8xnf by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P) in complex with human ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, L.J, Gu, Y.H, Shi, K.Y, Qi, J.X, Gao, G.F.
Deposit date:2023-12-29
Release date:2024-07-03
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8XN2
DownloadVisualize
BU of 8xn2 by Molmil
SARS-CoV-2 Omicron EG.5.1 RBD in complex with human ACE2 (local refined from the spike protein)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Li, L.J, Gu, Y.H, Shi, K.Y, Qi, J.X, Gao, G.F.
Deposit date:2023-12-28
Release date:2024-07-03
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8Y18
DownloadVisualize
BU of 8y18 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 RBD in complex with human ACE2 (local refinement from the spike protein)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
Deposit date:2024-01-23
Release date:2024-07-03
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8Y6A
DownloadVisualize
BU of 8y6a by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2 and S309 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
Deposit date:2024-02-02
Release date:2024-07-03
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8Y81
DownloadVisualize
BU of 8y81 by Molmil
Structure of the ige-fc bound to its high affinity receptor fc(epsilon)ri
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
Authors:Du, S, Deng, M.J, Xiao, J.Y.
Deposit date:2024-02-05
Release date:2024-07-10
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structural insights into the high-affinity IgE receptor Fc epsilon RI complex.
Nature, 633, 2024
8YM1
DownloadVisualize
BU of 8ym1 by Molmil
Structure of SADS-CoV Virus Nucleocapsid Protein
Descriptor: nucleocapsid phosphoprotein
Authors:Zhang, Y, Wu, F, Xu, W.
Deposit date:2024-03-08
Release date:2024-07-24
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unraveling the assembly mechanism of SADS-CoV virus nucleocapsid protein: insights from RNA binding, dimerization, and epitope diversity profiling.
J.Virol., 98, 2024
8Y3Q
DownloadVisualize
BU of 8y3q by Molmil
ASFV p72 in complex with Fab F11
Descriptor: B646L, Heavy chain of F11, Light chain of F11
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-01-29
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
8Y3O
DownloadVisualize
BU of 8y3o by Molmil
ASFV p72 in complex with Fab B1
Descriptor: B646L, Heavy chain of B1, Light chain of B1
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-01-29
Release date:2024-09-04
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
8Y3R
DownloadVisualize
BU of 8y3r by Molmil
ASFV p72 in complex with Fab H3
Descriptor: B646L, Heavy chain of H3, Light chain of H3
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-01-29
Release date:2024-09-04
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
8Y3P
DownloadVisualize
BU of 8y3p by Molmil
ASFV p72 in complex with Fab C9
Descriptor: B646L, Heavy chain of C9, Light chain of C9
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-01-29
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
8Y3N
DownloadVisualize
BU of 8y3n by Molmil
The self-assembled nanotube of CPC46A/Q70C
Descriptor: Capsid protein
Authors:Yang, M, Rao, G, Li, L, Qi, L, Ma, C, Zhang, H, Gong, J, Wei, B, Zhang, X.E, Chen, G, Cao, S, Li, F.
Deposit date:2024-01-29
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Transformation of a Viral Capsid from Nanocages to Nanotubes and Then to Hydrogels: Redirected Self-Assembly and Effects on Immunogenicity.
Acs Nano, 18, 2024
8Y3T
DownloadVisualize
BU of 8y3t by Molmil
The self-assembled nanotube of CPC46A/Q70H
Descriptor: Capsid protein
Authors:Yang, M, Rao, G, Li, L, Qi, L, Ma, C, Zhang, H, Gong, J, Wei, B, Zhang, X.E, Chen, G, Cao, S, Li, F.
Deposit date:2024-01-29
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Transformation of a Viral Capsid from Nanocages to Nanotubes and Then to Hydrogels: Redirected Self-Assembly and Effects on Immunogenicity.
Acs Nano, 18, 2024
8Y3V
DownloadVisualize
BU of 8y3v by Molmil
The self-assembled nanotube of CPC46A/Q70V
Descriptor: Capsid protein
Authors:Yang, M, Rao, G, Li, L, Qi, L, Ma, C, Zhang, H, Gong, J, Wei, B, Zhang, X.E, Chen, G, Cao, S, Li, F.
Deposit date:2024-01-29
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Transformation of a Viral Capsid from Nanocages to Nanotubes and Then to Hydrogels: Redirected Self-Assembly and Effects on Immunogenicity.
Acs Nano, 18, 2024
8XK2
DownloadVisualize
BU of 8xk2 by Molmil
A neutralizing nanobody VHH60 against wt SARS-CoV-2
Descriptor: Spike protein S1, VHH60 nanobody
Authors:Lu, Y, Guo, H, Ji, X, Yang, H.
Deposit date:2023-12-22
Release date:2024-07-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:A broad neutralizing nanobody against SARS-CoV-2 engineered from an approved drug.
Cell Death Dis, 15, 2024
8XKI
DownloadVisualize
BU of 8xki by Molmil
A neutralizing nanobody VHH60 against wt SARS-CoV-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lu, Y, Guo, H, Ji, X, Yang, H.
Deposit date:2023-12-23
Release date:2024-07-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A broad neutralizing nanobody against SARS-CoV-2 engineered from an approved drug.
Cell Death Dis, 15, 2024
8ZGU
DownloadVisualize
BU of 8zgu by Molmil
Crystal structural of HTNV Gn and AH100 Fab
Descriptor: AH100 heavy chain, AH100 light chain, Envelopment polyprotein
Authors:Wang, F.R, Wu, Y, Gao, F.
Deposit date:2024-05-09
Release date:2024-07-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Crystal structural of HTNV Gn and AH100 Fab
To Be Published
9BJM
DownloadVisualize
BU of 9bjm by Molmil
Crystal Structure of Inhibitor 5c in Complex with Prefusion RSV F Glycoprotein
Descriptor: 1'-{[5-chloro-1-(4,4,4-trifluorobutyl)-1H-1,3-benzimidazol-2-yl]methyl}-1-(methanesulfonyl)spiro[azetidine-3,3'-indol]-2'(1'H)-one, Prefusion RSV F (DS-CAV1),Envelope glycoprotein
Authors:Shaffer, P.L, Milligan, C, Abeywickrema, P.
Deposit date:2024-04-25
Release date:2024-07-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Spiro-Azetidine Oxindoles as Long-Acting Injectables for Pre-Exposure Prophylaxis against Respiratory Syncytial Virus Infections.
J.Med.Chem., 67, 2024
8XLV
DownloadVisualize
BU of 8xlv by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P), 1-RBD-up state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Li, L.J, Gu, Y.H, Shi, K.Y, Qi, J.X, Gao, G.F.
Deposit date:2023-12-26
Release date:2024-07-03
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8Y5J
DownloadVisualize
BU of 8y5j by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
Deposit date:2024-01-31
Release date:2024-07-03
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8Y16
DownloadVisualize
BU of 8y16 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron JN.1 spike protein in complex with human ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Li, L.J, Gu, Y.H, Qi, J.X, Gao, G.F.
Deposit date:2024-01-23
Release date:2024-07-03
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Spike structures, receptor binding, and immune escape of recently circulating SARS-CoV-2 Omicron BA.2.86, JN.1, EG.5, EG.5.1, and HV.1 sub-variants.
Structure, 32, 2024
8XJ0
DownloadVisualize
BU of 8xj0 by Molmil
Crystal structure of AmFab mutant - P40C/E165C (Light chain), G10C/P210C(Heavy chain)
Descriptor: Adalimumab Fab Heavy chain, Adalimumab Fab Light chain
Authors:Senda, M, Yoshikawa, M, Nakamura, H, Ohkuri, T, Senda, T.
Deposit date:2023-12-20
Release date:2024-02-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Stabilization of adalimumab Fab through the introduction of disulfide bonds between the variable and constant domains.
Biochem.Biophys.Res.Commun., 700, 2024
8ZL9
DownloadVisualize
BU of 8zl9 by Molmil
ASFV p72 in complex with Fab G6
Descriptor: B646L, G6 Heavy chain, G6 Light chain
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-05-17
Release date:2024-09-18
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
7L7K
DownloadVisualize
BU of 7l7k by Molmil
Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
Descriptor: Spike glycoprotein
Authors:Lees, J.A, Han, S.
Deposit date:2020-12-28
Release date:2021-02-24
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:BNT162b vaccines protect rhesus macaques from SARS-CoV-2.
Nature, 592, 2021
7L7F
DownloadVisualize
BU of 7l7f by Molmil
Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein, Envelope glycoprotein fusion
Authors:Lees, J.A, Han, S.
Deposit date:2020-12-28
Release date:2021-02-24
Last modified:2021-04-21
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:BNT162b vaccines protect rhesus macaques from SARS-CoV-2.
Nature, 592, 2021

227344

数据于2024-11-13公开中

PDB statisticsPDBj update infoContact PDBjnumon