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1Y0Y
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Crystal structure of tetrahedral aminopeptidase from P. horikoshii in complex with amastatin
Descriptor: AMASTATIN, Frv operon protein FrvX, ZINC ION
Authors:Groll, M, Borissenko, L.
Deposit date:2004-11-16
Release date:2005-03-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of TET Protease Reveals Complementary Protein Degradation Pathways in Prokaryotes
J.Mol.Biol., 346, 2005
1YF1
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Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SODIUM ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1YF9
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BU of 1yf9 by Molmil
Structural analysis of Leishmania major ubiquitin conjugating enzyme E2
Descriptor: CHLORIDE ION, Ubiquitin carrier protein 4
Authors:Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2004-12-31
Release date:2005-02-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of Leishmania major ubiquitin conjugating enzyme E2
To be Published
1YHU
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Crystal structure of Riftia pachyptila C1 hemoglobin reveals novel assembly of 24 subunits.
Descriptor: Giant hemoglobins B chain, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Flores, J.F, Fisher, C.R, Carney, S.L, Green, B.N, Freytag, J.K, Schaeffer, S.W, Royer, W.E.
Deposit date:2005-01-10
Release date:2005-02-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Sulfide binding is mediated by zinc ions discovered in the crystal structure of a hydrothermal vent tubeworm hemoglobin.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Y18
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Fab fragment of catalytic elimination antibody 34E4 E(H50)D mutant in complex with hapten
Descriptor: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic antibody 34E4 heavy chain, ...
Authors:Debler, E.W, Ito, S, Heine, A, Wilson, I.A.
Deposit date:2004-11-17
Release date:2005-04-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural origins of efficient proton abstraction from carbon by a catalytic antibody
Proc.Natl.Acad.Sci.USA, 102, 2005
1Y20
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Crystal structure of the NR1 ligand-binding core in complex with ACPC
Descriptor: 1-AMINOCYCLOPROPANECARBOXYLIC ACID, Glutamate [NMDA] receptor subunit zeta 1
Authors:Inanobe, A, Gouaux, E.
Deposit date:2004-11-19
Release date:2005-07-12
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of Partial Agonist Action at the NR1 Subunit of NMDA Receptors.
Neuron, 47, 2005
1Y28
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BU of 1y28 by Molmil
Crystal structure of the R220A metBJFIXL HEME domain
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Sensor protein fixL
Authors:Dunham, C.M, Dioum, E.M, Tuckerman, J.R, Gonzalez, G, Scott, W.G, Gilles-Gonzalez, M.A.
Deposit date:2004-11-21
Release date:2004-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A distal arginine in the oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure
Biochemistry, 42, 2003
4V6D
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BU of 4v6d by Molmil
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhang, W, Dunkle, J.A, Cate, J.H.D.
Deposit date:2009-06-27
Release date:2014-07-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.814 Å)
Cite:Structures of the ribosome in intermediate States of ratcheting.
Science, 325, 2009
1Y0E
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BU of 1y0e by Molmil
Crystal structure of putative ManNAc-6-P epimerase from Staphylococcus aureus (strain N315)
Descriptor: PHOSPHATE ION, Putative N-acetylmannosamine-6-phosphate 2-epimerase
Authors:Chang, C, Joachimiak, A, Li, H, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-11-15
Release date:2004-12-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of putative ManNAc-6-P epimerase from Staphylococcus aureus (strain N315)
To be Published
1Y12
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Structure of a hemolysin-coregulated protein from Pseudomonas aeruginosa
Descriptor: hypothetical protein PA0085
Authors:Cuff, M.E, Zhou, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-11-16
Release date:2005-01-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus.
Science, 312, 2006
4V7S
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BU of 4v7s by Molmil
Crystal structure of the E. coli ribosome bound to telithromycin.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Dunkle, J.A, Xiong, L, Mankin, A.S, Cate, J.H.D.
Deposit date:2010-08-05
Release date:2014-07-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.2547 Å)
Cite:Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action.
Proc.Natl.Acad.Sci.USA, 107, 2010
1Y1O
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X-ray crystal Structure of Penicillin-binding protein-related factor A from Bacillus stearothermophilus
Descriptor: NICKEL (II) ION, Penicillin-binding protein-related factor A, SULFATE ION
Authors:Osipiuk, J, Li, H, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-11-19
Release date:2004-12-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal Structure of Penicillin-binding protein-related factor A from Bacillus stearothermophilus
To be Published
1Y21
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BU of 1y21 by Molmil
Crystal Structure of Cimex Nitrophorin NO Complex
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Weichsel, A, Maes, E.M, Andersen, J.F, Valenzuela, J.G, Shokhireva, T.K, Walker, F.A, Montfort, W.R.
Deposit date:2004-11-19
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Heme-assisted S-nitrosation of a proximal thiolate in a nitric oxide transport protein.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1Y2A
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BU of 1y2a by Molmil
Structure of mammalian importin bound to the non-classical PLSCR1-NLS
Descriptor: Importin alpha-2 Subunit, decamer fragment of Phospholipid scramblase 1
Authors:Chen, M.-H, Ben-Efraim, I, Mitrousis, G, Walker-Kopp, N, Sims, P.J, Cingolani, G.
Deposit date:2004-11-22
Release date:2005-02-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phospholipid Scramblase 1 Contains a Nonclassical Nuclear Localization Signal with Unique Binding Site in Importin alpha
J.Biol.Chem., 280, 2005
1Y2B
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BU of 1y2b by Molmil
Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1H-pyrazole-4-carboxylic acid ethyl ester
Descriptor: 1,2-ETHANEDIOL, 3,5-DIMETHYL-1H-PYRAZOLE-4-CARBOXYLIC ACID ETHYL ESTER, MAGNESIUM ION, ...
Authors:Card, G.L, Blasdel, L, England, B.P, Zhang, C, Suzuki, Y, Gillette, S, Fong, D, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-11-22
Release date:2005-03-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A family of phosphodiesterase inhibitors discovered by cocrystallography and scaffold-based drug design
Nat.Biotechnol., 23, 2005
1Y2O
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BU of 1y2o by Molmil
Structure of N-terminal domain IRSp53/BAIAP2
Descriptor: BAI1-associated protein 2 isoform 1
Authors:Millard, T.H, Bompard, G, Heung, M.-Y, Dafforn, T.R, Scott, D.J, Machesky, L.M, Futterer, K.
Deposit date:2004-11-23
Release date:2005-02-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of filopodia formation induced by the IRSp53/MIM homology domain of human IRSp53
Embo J., 24, 2005
1Y30
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BU of 1y30 by Molmil
X-ray crystal structure of mycobacterium tuberculosis pyridoxine 5'-phosphate oxidase complexed with flavin mononucleotide at 2.2 a resolution
Descriptor: FLAVIN MONONUCLEOTIDE, hypothetical protein Rv1155
Authors:Biswal, B.K, Cherney, M.M, Wang, M, Garen, C, James, M.N, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-11-23
Release date:2005-08-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Mycobacterium tuberculosispyridoxine 5'-phosphate oxidase and its complexes with flavin mononucleotide and pyridoxal 5'-phosphate.
Acta Crystallogr.,Sect.D, 61, 2005
1Y3A
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BU of 1y3a by Molmil
Structure of G-Alpha-I1 bound to a GDP-selective peptide provides insight into guanine nucleotide exchange
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
Authors:Johnston, C.A, Willard, F.S, Jezyk, M.R, Fredericks, Z, Bodor, E.T, Jones, M.B, Blaesius, R, Harden, T.K, Sondek, J, Watts, V.J, Ramer, J.K, Siderovski, D.P.
Deposit date:2004-11-24
Release date:2005-07-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of G-Alpha-I1 bound to a GDP-selective peptide provides insight into guanine nucleotide exchange
Structure, 7, 2005
1Y2T
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BU of 1y2t by Molmil
Crystal structure of the common edible mushroom (Agaricus bisporus) lectin
Descriptor: lectin
Authors:Carrizo, M.E, Capaldi, S, Perduca, M, Irazoqui, F.J, Nores, G.A, Monaco, H.L.
Deposit date:2004-11-23
Release date:2004-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Antineoplastic Lectin of the Common Edible Mushroom (Agaricus bisporus) Has Two Binding Sites, Each Specific for a Different Configuration at a Single Epimeric Hydroxyl
J.Biol.Chem., 280, 2005
1Y31
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BU of 1y31 by Molmil
T-To-T(High) quaternary transitions in human hemoglobin: betaY35A deoxy low-salt (1 test set)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2004-11-23
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1Y3U
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TRYPSIN INHIBITOR COMPLEX
Descriptor: (1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YLMETHYL-1-ISOPROPYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE, CALCIUM ION, Trypsin, ...
Authors:Fokkens, J, Obst, U, Heine, A, Diederich, F, Klebe, G.
Deposit date:2004-11-26
Release date:2005-12-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Thermodynamic Characterisation of Protein-Inhibitor-Complexes of Thrombin and Trypsin Inhibitors
To be Published
1Y45
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T-To-T(high) quaternary transitions in human hemoglobin: betaP36A deoxy low-salt (10 test sets)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2004-11-30
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1Y4P
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BU of 1y4p by Molmil
T-To-T(high) quaternary transitions in human hemoglobin: betaW37E deoxy low-salt (10 test sets)
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2004-12-01
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1Y43
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crystal structure of aspergilloglutamic peptidase from Aspergillus niger
Descriptor: Aspergillopepsin II heavy chain, Aspergillopepsin II light chain, SULFATE ION
Authors:Sasaki, H, Nakagawa, A, Iwata, S, Muramatsu, T, Suganuma, M, Sawano, Y, Kojima, M, Kubota, K, Takahashi, K.
Deposit date:2004-11-30
Release date:2005-12-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The three-dimensional structure of aspergilloglutamic peptidase from Aspergillus niger
Proc.Jpn.Acad.,Ser.B, 80, 2004
1Y5C
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The structure of a lactoferricinB derivative bound to micelles (LfcinB4-14)
Descriptor: Lactotransferrin
Authors:Nguyen, L.T, Schibli, D.J, Vogel, H.J.
Deposit date:2004-12-02
Release date:2005-03-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural studies and model membrane interactions of two peptides derived from bovine lactoferricin
J.Pept.Sci., 11, 2005

245663

数据于2025-12-03公开中

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