Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6S0M
DownloadVisualize
BU of 6s0m by Molmil
Structural and dynamic studies provide insights into specificity and allosteric regulation of Ribonuclease AS, a key enzyme in mycobacterial virulence
Descriptor: 3'-5' exoribonuclease, MAGNESIUM ION, RNA (5'-R(P*G)-3')
Authors:Berisio, R, Romano, M.
Deposit date:2019-06-17
Release date:2019-08-28
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and dynamic studies provide insights into specificity and allosteric regulation of ribonuclease as, a key enzyme in mycobacterial virulence.
J.Biomol.Struct.Dyn., 38, 2020
5J7I
DownloadVisualize
BU of 5j7i by Molmil
Crystal structure of a Geobacillus thermoglucosidasius Acetylating Aldehyde Dehydrogenase in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, Acetaldehyde dehydrogenase (Acetylating)
Authors:Crennell, S.J, Extance, J.P, Danson, M.J.
Deposit date:2016-04-06
Release date:2016-09-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of an acetylating aldehyde dehydrogenase from the thermophilic ethanologen Geobacillus thermoglucosidasius.
Protein Sci., 25, 2016
6UY4
DownloadVisualize
BU of 6uy4 by Molmil
Crystal structure of dihydroorotate dehydrogenase from Schistosoma mansoni
Descriptor: 2-[(4-fluorophenyl)amino]-3-hydroxynaphthalene-1,4-dione, Dihydroorotate dehydrogenase, FLAVIN MONONUCLEOTIDE, ...
Authors:Mori, R.M, Zapata, L.C.C, Nonato, M.C.
Deposit date:2019-11-11
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Structural basis for the function and inhibition of dihydroorotate dehydrogenase from Schistosoma mansoni.
Febs J., 288, 2021
5JO9
DownloadVisualize
BU of 5jo9 by Molmil
Structural characterization of the thermostable Bradyrhizobium japonicum d-sorbitol dehydrogenase
Descriptor: PHOSPHATE ION, Ribitol 2-dehydrogenase, sorbitol
Authors:Fredslund, F, Otten, H, Navarro Poulsen, J.-C, Lo Leggio, L.
Deposit date:2016-05-02
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.894 Å)
Cite:Structural characterization of the thermostable Bradyrhizobium japonicumD-sorbitol dehydrogenase.
Acta Crystallogr F Struct Biol Commun, 72, 2016
4UM4
DownloadVisualize
BU of 4um4 by Molmil
STRUCTURE OF INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI IN COMPLEX WITH SULFATE
Descriptor: INORGANIC PYROPHOSPHATASE, SULFATE ION
Authors:Campos-Acevedo, A.A, Rudino-Pinera, E.
Deposit date:2014-05-15
Release date:2014-11-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:First attempts to crystallize a non-homogeneous sample of thioredoxin from Litopenaeus vannamei: What to do when you have diffraction data of a protein that is not the target?
Biochem Biophys Rep, 8, 2016
8BWU
DownloadVisualize
BU of 8bwu by Molmil
Crystal structure of SARS-CoV-2 nsp14 methyltransferase domain in complex with the SS148 inhibitor
Descriptor: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-5-cyano-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Transcription factor ETV6,Proofreading exoribonuclease nsp14, ZINC ION
Authors:Konkolova, E, Klima, M, Boura, E, Jin, J, Kaniskan, H.U, Han, Y, Vedadi, M.
Deposit date:2022-12-07
Release date:2023-10-11
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Application of established computational techniques to identify potential SARS-CoV-2 Nsp14-MTase inhibitors in low data regimes
Digit Discov, 2024
1XFT
DownloadVisualize
BU of 1xft by Molmil
Synchrotron X-ray Powder Diffraction Study of Hexagonal Turkey Egg-white Lysozyme
Descriptor: Lysozyme C
Authors:Margiolaki, I, Wright, J.P.
Deposit date:2004-09-15
Release date:2005-04-05
Last modified:2023-10-25
Method:POWDER DIFFRACTION (3.35 Å)
Cite:Synchrotron X-ray powder diffraction study of hexagonal turkey egg-white lysozyme.
Acta Crystallogr.,Sect.D, 61, 2005
5LUD
DownloadVisualize
BU of 5lud by Molmil
Structure of Cyclophilin A in complex with 2,3-Diaminopyridine
Descriptor: Peptidyl-prolyl cis-trans isomerase, pyridine-2,3-diamine
Authors:McNae, I.W, Nowicki, M.W, Blackburn, E.A, Wear, M.A, Walkinshaw, M.D.
Deposit date:2016-09-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Thermo-kinetic analysis space expansion for cyclophilin-ligand interactions - identification of a new nonpeptide inhibitor using BiacoreTM T200.
FEBS Open Bio, 7, 2017
6IN8
DownloadVisualize
BU of 6in8 by Molmil
Crystal structure of MucB
Descriptor: Sigma factor AlgU regulatory protein MucB
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2018-10-24
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the recognition of MucA by MucB and AlgU in Pseudomonas aeruginosa.
Febs J., 286, 2019
4YEN
DownloadVisualize
BU of 4yen by Molmil
Room temperature X-ray diffraction studies of cisplatin binding to HEWL in DMSO media after 14 months of crystal storage - new refinement
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Shabalin, I.G, Dauter, Z, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2015-02-24
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.
Acta Crystallogr.,Sect.D, 71, 2015
6S5V
DownloadVisualize
BU of 6s5v by Molmil
Crystal structure of the Cap-Midlink region of the H5N1 Influenza A virus polymerase in complex with a Cap-domain binding analogue
Descriptor: (1~{S},2~{S},3~{S},6~{R})-2-[[2-[5,7-bis(fluoranyl)-1~{H}-indol-3-yl]-5-fluoranyl-pyrimidin-4-yl]amino]-3,6-dimethyl-cyclohexane-1-carboxylic acid, GLYCEROL, POTASSIUM ION, ...
Authors:Keown, J.R, Fodor, E, Grimes, J.M.
Deposit date:2019-07-02
Release date:2019-11-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Design, Synthesis, and Biological Evaluation of Novel Indoles Targeting the Influenza PB2 Cap Binding Region.
J.Med.Chem., 62, 2019
6TJR
DownloadVisualize
BU of 6tjr by Molmil
Structure of HdrA-like subunit from Hyphomicrobium denitrificans
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Fumarate reductase/succinate dehydrogenase flavoprotein domain protein, ...
Authors:Kayastha, K, Ermler, U, Dahl, C.
Deposit date:2019-11-26
Release date:2020-08-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural and spectroscopic characterization of a HdrA-like subunit from Hyphomicrobium denitrificans.
Febs J., 288, 2021
6T5X
DownloadVisualize
BU of 6t5x by Molmil
Crystal structure of Salmonella typhimurium FabG in complex with NADPH at 1.5 A resolution
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase FabG, GLYCEROL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Vella, P, Schnell, R, Schneider, G.
Deposit date:2019-10-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A FabG inhibitor targeting an allosteric binding site inhibits several orthologs from Gram-negative ESKAPE pathogens.
Bioorg.Med.Chem., 30, 2021
6T62
DownloadVisualize
BU of 6t62 by Molmil
Crystal structure of Acinetobacter baumannii FabG in complex with NADPH at 1.8 A resolution
Descriptor: 3-oxoacyl-(Acyl-carrier-protein) reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vella, P, Schnell, R, Schneider, G.
Deposit date:2019-10-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A FabG inhibitor targeting an allosteric binding site inhibits several orthologs from Gram-negative ESKAPE pathogens.
Bioorg.Med.Chem., 30, 2020
6V7M
DownloadVisualize
BU of 6v7m by Molmil
Crystal structure of a proteolytically cleaved, amino terminal domain of apolipoprotein E3
Descriptor: Apolipoprotein E, PHOSPHATE ION
Authors:McPherson, A.
Deposit date:2019-12-08
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a proteolytically cleaved, amino terminal domain of apolipoprotein E3.
Biochem.Biophys.Res.Commun., 2020
5LRQ
DownloadVisualize
BU of 5lrq by Molmil
BRD4 in complex with ERK5 inhibitor XMD8-92
Descriptor: 2-{[2-ethoxy-4-(4-hydroxypiperidin-1-yl)phenyl]amino}-5,11-dimethyl-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 4
Authors:Martin, M.P, Noble, M.E.M.
Deposit date:2016-08-19
Release date:2017-08-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification of a novel orally bioavailable ERK5 inhibitor with selectivity over p38 alpha and BRD4.
Eur.J.Med.Chem., 178, 2019
6ICR
DownloadVisualize
BU of 6icr by Molmil
LdCoroCC mutant- C482A
Descriptor: 1,2-ETHANEDIOL, Coronin-like protein
Authors:Karade, S.S, Srivastava, V.K, Ansari, A, Pratap, J.V.
Deposit date:2018-09-06
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Molecular and structural analysis of a mechanical transition of helices in the L. donovani coronin coiled-coil domain.
Int.J.Biol.Macromol., 143, 2020
6IN9
DownloadVisualize
BU of 6in9 by Molmil
Crystal structure of MucB in complex with MucA(peri)
Descriptor: Sigma factor AlgU negative regulatory protein, Sigma factor AlgU regulatory protein MucB
Authors:Li, S, Zhang, Q, Bartlam, M.
Deposit date:2018-10-24
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structural basis for the recognition of MucA by MucB and AlgU in Pseudomonas aeruginosa.
Febs J., 286, 2019
6RPV
DownloadVisualize
BU of 6rpv by Molmil
Extremely stable monomeric variant of human cystatin C with single amino acid substitution
Descriptor: Cystatin-C
Authors:Zhukov, I, Rodziewicz-Motowidlo, S, Maszota-Zieleniak, M, Jurczak, P, Kozak, M.
Deposit date:2019-05-14
Release date:2019-07-31
Last modified:2023-06-14
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution.
Febs J., 287, 2020
4YEK
DownloadVisualize
BU of 4yek by Molmil
X-ray structure of the thymidine phosphorylase from Salmonella typhimurium in complex with thymidine
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Balaev, V.V, Lashkov, A.A, Gabdulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2015-02-24
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural investigation of the thymidine phosphorylase from Salmonella typhimurium in the unliganded state and its complexes with thymidine and uridine.
Acta Crystallogr.,Sect.F, 72, 2016
1Y4O
DownloadVisualize
BU of 1y4o by Molmil
Solution structure of a mouse cytoplasmic Roadblock/LC7 dynein light chain
Descriptor: Dynein light chain 2A, cytoplasmic
Authors:Song, J, Tyler, R.C, Lee, M.S, Tyler, E.M, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-12-01
Release date:2005-01-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of isoform 1 of Roadblock/LC7, a light chain in the dynein complex.
J.Mol.Biol., 354, 2005
4I60
DownloadVisualize
BU of 4i60 by Molmil
Crystal structure of avidin - biotinylruthenocene complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}cyclopentadienyl]ruthenium
Authors:Strzelczyk, P, Bujacz, A, Bujacz, G.
Deposit date:2012-11-29
Release date:2013-08-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural investigation of the interactions of biotinylruthenocene with avidin.
Chem.Biol.Interact, 204, 2013
4EW9
DownloadVisualize
BU of 4ew9 by Molmil
The liganded structure of C. bescii family 3 pectate lyase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, ACETATE ION, ...
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2012-04-26
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure and mode of action of Caldicellulosiruptor bescii family 3 pectate lyase in biomass deconstruction.
Acta Crystallogr. D Biol. Crystallogr., 69, 2013
7L5F
DownloadVisualize
BU of 7l5f by Molmil
Crystal Structure of N-(2-oxocyclobutyl) decanamide Bound AiiA-Co
Descriptor: 4-(decanoylamino)butanoic acid, COBALT (II) ION, GLYCEROL, ...
Authors:Mascarenhas, R.N, Liu, D.
Deposit date:2020-12-22
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Cyclobutanone Inhibitor of Cobalt-Functionalized Metallo-gamma-Lactonase AiiA with Cyclobutanone Ring Opening in the Active Site.
Acs Omega, 6, 2021
3F5A
DownloadVisualize
BU of 3f5a by Molmil
Crystal structure of Toxoplasma gondii micronemal protein 1 bound to 3'SiaLacNAc1-3
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Garnett, J.A, Liu, Y, Feizi, T, Matthews, S.J.
Deposit date:2008-11-03
Release date:2009-07-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Detailed insights from microarray and crystallographic studies into carbohydrate recognition by microneme protein 1 (MIC1) of Toxoplasma gondii.
Protein Sci., 18, 2009

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon