Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CG3
DownloadVisualize
BU of 8cg3 by Molmil
Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 1)
Descriptor: TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2023-02-03
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:TDP-43 forms amyloid filaments with a distinct fold in type A FTLD-TDP.
Nature, 620, 2023
8CGG
DownloadVisualize
BU of 8cgg by Molmil
Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 2)
Descriptor: TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2023-02-04
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:TDP-43 forms amyloid filaments with a distinct fold in type A FTLD-TDP.
Nature, 620, 2023
8CGH
DownloadVisualize
BU of 8cgh by Molmil
Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 3)
Descriptor: TAR DNA-binding protein 43
Authors:Arseni, D, Ryskeldi-Falcon, B.
Deposit date:2023-02-04
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:TDP-43 forms amyloid filaments with a distinct fold in type A FTLD-TDP.
Nature, 620, 2023
8OX1
DownloadVisualize
BU of 8ox1 by Molmil
Structure of TRF1core in complex with telomeric nucleosome
Descriptor: Histone H2A type 1-C, Histone H2B type 1-C/E/F/G/I, Histone H3.1, ...
Authors:Hu, H, van Roon, A.M.M, Ghanim, G.E, Ahsan, B, Oluwole, A, Peak-Chew, S, Robinson, C.V, Nguyen, T.H.D.
Deposit date:2023-04-28
Release date:2023-08-30
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of telomeric nucleosome recognition by shelterin factor TRF1.
Sci Adv, 9, 2023
7APK
DownloadVisualize
BU of 7apk by Molmil
Structure of the human THO - UAP56 complex
Descriptor: Spliceosome RNA helicase DDX39B, THO complex subunit 1, THO complex subunit 2, ...
Authors:Hohmann, U, Puehringer, T, Plaschka, C.
Deposit date:2020-10-17
Release date:2020-12-16
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the human core transcription-export complex reveals a hub for multivalent interactions.
Elife, 9, 2020
7ASU
DownloadVisualize
BU of 7asu by Molmil
Crystal structure of tWHD1 of Rpc5 subunit of human RNA Polymerase III
Descriptor: DNA-directed RNA polymerase III subunit RPC5, ZINC ION
Authors:Vannini, A, Abascal-Palacios, G, Ramsay, E.P.
Deposit date:2020-10-28
Release date:2020-12-30
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure of human RNA polymerase III.
Nat Commun, 11, 2020
7AXZ
DownloadVisualize
BU of 7axz by Molmil
Ku70/80 complex apo form
Descriptor: X-ray repair cross-complementing protein 5, X-ray repair cross-complementing protein 6
Authors:Hnizda, A, Tesina, P, Novak, P, Blundell, T.L.
Deposit date:2020-11-10
Release date:2021-02-10
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:SAP domain forms a flexible part of DNA aperture in Ku70/80.
Febs J., 288, 2021
1A5R
DownloadVisualize
BU of 1a5r by Molmil
STRUCTURE DETERMINATION OF THE SMALL UBIQUITIN-RELATED MODIFIER SUMO-1, NMR, 10 STRUCTURES
Descriptor: SUMO-1
Authors:Bayer, P, Arndt, A, Metzger, S, Mahajan, R, Melchior, F, Jaenicke, R, Becker, J.
Deposit date:1998-02-18
Release date:1998-10-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure determination of the small ubiquitin-related modifier SUMO-1.
J.Mol.Biol., 280, 1998
1HA1
DownloadVisualize
BU of 1ha1 by Molmil
HNRNP A1 (RBD1,2) FROM HOMO SAPIENS
Descriptor: HNRNP A1
Authors:Shamoo, Y, Krueger, U, Rice, L, Williams, K.R, Steitz, T.A.
Deposit date:1996-10-30
Release date:1997-05-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the two RNA binding domains of human hnRNP A1 at 1.75 A resolution.
Nat.Struct.Biol., 4, 1997
7SU3
DownloadVisualize
BU of 7su3 by Molmil
CryoEM structure of DNA-PK complex VII
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), ...
Authors:Chen, X, Liu, L, Gellert, M, Yang, W.
Deposit date:2021-11-16
Release date:2022-01-12
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.
Mol.Cell, 82, 2022
8AS5
DownloadVisualize
BU of 8as5 by Molmil
CryoEM structure of the human Nucleophosmin 1 core
Descriptor: Nucleophosmin
Authors:Valentin Gese, G, Hallberg, B.M.
Deposit date:2022-08-18
Release date:2023-02-15
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:A "grappling hook" interaction connects self-assembly and chaperone activity of Nucleophosmin 1.
Pnas Nexus, 2, 2023
3KYD
DownloadVisualize
BU of 3kyd by Molmil
Human SUMO E1~SUMO1-AMP tetrahedral intermediate mimic
Descriptor: 1,2-ETHANEDIOL, 5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosine, SUMO-activating enzyme subunit 1, ...
Authors:Lima, C.D.
Deposit date:2009-12-05
Release date:2010-02-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Active site remodelling accompanies thioester bond formation in the SUMO E1.
Nature, 463, 2010
7FJI
DownloadVisualize
BU of 7fji by Molmil
human Pol III elongation complex
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Hou, H, Xu, Y.
Deposit date:2021-08-04
Release date:2021-10-27
Last modified:2021-11-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into RNA polymerase III-mediated transcription termination through trapping poly-deoxythymidine.
Nat Commun, 12, 2021
7FJJ
DownloadVisualize
BU of 7fjj by Molmil
human Pol III pre-termination complex
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Hou, H, Xu, Y.
Deposit date:2021-08-04
Release date:2021-10-27
Last modified:2021-11-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into RNA polymerase III-mediated transcription termination through trapping poly-deoxythymidine.
Nat Commun, 12, 2021
6P5J
DownloadVisualize
BU of 6p5j by Molmil
Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)
Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
Authors:Acosta-Reyes, F.J, Neupane, R, Frank, J, Fernandez, I.S.
Deposit date:2019-05-30
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Embo J., 38, 2019
1Y8R
DownloadVisualize
BU of 1y8r by Molmil
SUMO E1 ACTIVATING ENZYME SAE1-SAE2-SUMO1-MG-ATP COMPLEX
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ubiquitin-like 1 activating enzyme E1A, ...
Authors:Lois, L.M, Lima, C.D.
Deposit date:2004-12-13
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structures of the SUMO E1 provide mechanistic insights into SUMO activation and E2 recruitment to E1
Embo J., 24, 2005
6RYR
DownloadVisualize
BU of 6ryr by Molmil
Nucleosome-CHD4 complex structure (single CHD4 copy)
Descriptor: Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
Authors:Farnung, L, Ochmann, M, Cramer, P.
Deposit date:2019-06-11
Release date:2020-07-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020
6RYU
DownloadVisualize
BU of 6ryu by Molmil
Nucleosome-CHD4 complex structure (two CHD4 copies)
Descriptor: Chromodomain-helicase-DNA-binding protein 4,CHD4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
Authors:Farnung, L, Ochmann, M, Cramer, P.
Deposit date:2019-06-12
Release date:2020-07-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020
8DJH
DownloadVisualize
BU of 8djh by Molmil
Ternary complex of SUMO1 with a phosphomimetic SIM of PML and zinc
Descriptor: PML 4SD, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
8DJI
DownloadVisualize
BU of 8dji by Molmil
Ternary complex of SUMO1 with the SIM of PML and zinc
Descriptor: Protein PML, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
8D4Y
DownloadVisualize
BU of 8d4y by Molmil
C-terminal SANT-SLIDE domain of human Chromodomain-helicase-DNA-binding protein 4 (CHD4)
Descriptor: Chromodomain-helicase-DNA-binding protein 4
Authors:Moghaddas Sani, H, Deshpande, C.N, Panjikar, S, Patel, K, Mackay, J.P.
Deposit date:2022-06-03
Release date:2022-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The role of auxiliary domains in modulating CHD4 activity suggests mechanistic commonality between enzyme families.
Nat Commun, 13, 2022
6XOG
DownloadVisualize
BU of 6xog by Molmil
Structure of SUMO1-ML786519 adduct bound to SAE
Descriptor: SULFATE ION, SUMO-activating enzyme subunit 1, SUMO-activating enzyme subunit 2, ...
Authors:Sintchak, M, Lane, W, Bump, N.
Deposit date:2020-07-07
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Discovery of TAK-981, a First-in-Class Inhibitor of SUMO-Activating Enzyme for the Treatment of Cancer.
J.Med.Chem., 64, 2021
6XOH
DownloadVisualize
BU of 6xoh by Molmil
Structure of SUMO1-ML00789344 adduct bound to SAE
Descriptor: SULFATE ION, SUMO-activating enzyme subunit 1, SUMO-activating enzyme subunit 2, ...
Authors:Sintchak, M, Lane, W, Bump, N.
Deposit date:2020-07-07
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.226 Å)
Cite:Discovery of TAK-981, a First-in-Class Inhibitor of SUMO-Activating Enzyme for the Treatment of Cancer.
J.Med.Chem., 64, 2021
6XOI
DownloadVisualize
BU of 6xoi by Molmil
Structure of SUMO1-ML00752641 adduct bound to SAE
Descriptor: SULFATE ION, SUMO-activating enzyme subunit 1, SUMO-activating enzyme subunit 2, ...
Authors:Sintchak, M, Lane, W, Bump, N.
Deposit date:2020-07-07
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of TAK-981, a First-in-Class Inhibitor of SUMO-Activating Enzyme for the Treatment of Cancer.
J.Med.Chem., 64, 2021
6ZY7
DownloadVisualize
BU of 6zy7 by Molmil
Cryo-EM structure of the entire Human topoisomerase II alpha in State 1
Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*G)-3'), ...
Authors:Vanden Broeck, A, Lamour, V.
Deposit date:2020-07-30
Release date:2021-05-26
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.64 Å)
Cite:Structural basis for allosteric regulation of Human Topoisomerase II alpha.
Nat Commun, 12, 2021

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon