Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NMO
DownloadVisualize
BU of 3nmo by Molmil
Crystal structure of an engineered monomeric CLC-ec1 Cl-/H+ transporter
Descriptor: CHLORIDE ION, H(+)/Cl(-) exchange transporter clcA
Authors:Robertson, J.L, Kolmakova-Partensky, L, Miller, C.
Deposit date:2010-06-22
Release date:2010-07-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Design, function and structure of a monomeric ClC transporter.
Nature, 468, 2010
4CLA
DownloadVisualize
BU of 4cla by Molmil
ALTERNATIVE BINDING MODES FOR CHLORAMPHENICOL AND 1-SUBSTITUTED CHLORAMPHENICOL ANALOGUES REVEALED BY SITE-DIRECTED MUTAGENESIS AND X-RAY CRYSTALLOGRAPHY OF CHLORAMPHENICOL ACETYLTRANSFERASE
Descriptor: CHLORAMPHENICOL, COBALT (II) ION, TYPE III CHLORAMPHENICOL ACETYLTRANSFERASE
Authors:Leslie, A.G.W.
Deposit date:1990-10-23
Release date:1992-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Alternative binding modes for chloramphenicol and 1-substituted chloramphenicol analogues revealed by site-directed mutagenesis and X-ray crystallography of chloramphenicol acetyltransferase.
Biochemistry, 30, 1991
7JJU
DownloadVisualize
BU of 7jju by Molmil
Crystal structure of en exoribonuclease-resistant RNA (xrRNA) from Potato leafroll virus (PLRV)
Descriptor: CACODYLATE ION, Guanidinium, IRIDIUM HEXAMMINE ION, ...
Authors:Steckelberg, A.-L, Vicens, Q, Auffinger, P, Costantino, D.C, Nix, J.C, Kieft, J.S.
Deposit date:2020-07-27
Release date:2020-09-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:The crystal structure of a Polerovirus exoribonuclease-resistant RNA shows how diverse sequences are integrated into a conserved fold.
Rna, 26, 2020
4BZ4
DownloadVisualize
BU of 4bz4 by Molmil
CorA is a surface-associated copper-binding protein important in Methylomicrobium album BG8 copper acquisition
Descriptor: CALCIUM ION, COPPER (I) ION, COPPER-REPRESSIBLE POLYPEPTIDE, ...
Authors:Johnson, K.A, Ve, T, Pedersen, R.B, Lillehaug, J.R, Jensen, H.B, Helland, R, Karlsen, O.A.
Deposit date:2013-07-24
Release date:2014-02-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cora is a Copper Repressible Surface-Associated Copper(I)-Binding Protein Produced in Methylomicrobium Album Bg8.
Plos One, 9, 2014
3PDY
DownloadVisualize
BU of 3pdy by Molmil
Structure of the third and fourth spectrin repeats of the plakin domain of plectin
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Plectin
Authors:Ortega, E, de Pereda, J.M.
Deposit date:2010-10-25
Release date:2011-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2182 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals a Non-canonical SH3 Domain Interacting with Its Fourth Spectrin Repeat.
J.Biol.Chem., 286, 2011
7K18
DownloadVisualize
BU of 7k18 by Molmil
Cardiac Sodium channel with toxin bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-like toxin Lqh3, ...
Authors:Jiang, D, Catterall, W.A.
Deposit date:2020-09-07
Release date:2021-01-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for voltage-sensor trapping of the cardiac sodium channel by a deathstalker scorpion toxin.
Nat Commun, 12, 2021
7XYH
DownloadVisualize
BU of 7xyh by Molmil
Crystal structure of CK2a2 complexed with AG1112
Descriptor: 1,2-ETHANEDIOL, 5-azanyl-3-[(~{Z})-1-cyano-2-(1~{H}-indol-3-yl)ethenyl]-1~{H}-pyrazole-4-carbonitrile, Casein kinase II subunit alpha'
Authors:Ikeda, A, Kinoshita, T, Tsuyuguchi, M.
Deposit date:2022-06-01
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Bivalent binding mode of an amino-pyrazole inhibitor indicates the potentials for CK2 alpha 1-selective inhibitors.
Biochem.Biophys.Res.Commun., 630, 2022
6DG2
DownloadVisualize
BU of 6dg2 by Molmil
Antigen Binding Fragment of the Pan-ebolavirus Monoclonal Antibody 6D6
Descriptor: 6D6 Fab heavy chain, 6D6 Fab light chain
Authors:Milligan, J.C, Saphire, E.O.
Deposit date:2018-05-16
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Characterization of Pan-Ebolavirus Antibody 6D6 Targeting the Fusion Peptide of the Surface Glycoprotein.
J. Infect. Dis., 219, 2019
6E8M
DownloadVisualize
BU of 6e8m by Molmil
Legionella Longbeachae LeSH (Llo2327) bound to the human DnaJ-A1 pTyr381 peptide
Descriptor: DnaJ-A1 pTyr381 peptide, LeSH (Llo2327)
Authors:Kaneko, T, Li, S.S.C.
Deposit date:2018-07-30
Release date:2018-11-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Identification and characterization of a large family of superbinding bacterial SH2 domains.
Nat Commun, 9, 2018
7X73
DownloadVisualize
BU of 7x73 by Molmil
Structure of G9a in complex with RK-701
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Histone-lysine N-methyltransferase EHMT2, ...
Authors:Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Shirouzu, M, Umehara, T.
Deposit date:2022-03-09
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A specific G9a inhibitor unveils BGLT3 lncRNA as a universal mediator of chemically induced fetal globin gene expression.
Nat Commun, 14, 2023
5M7O
DownloadVisualize
BU of 5m7o by Molmil
Crystal structure of NtrX from Brucella abortus processed with the CrystalDirect automated mounting and cryo-cooling technology
Descriptor: MAGNESIUM ION, Nitrogen assimilation regulatory protein
Authors:Cornaciu, I, Fernandez, I, Hoffmann, G, Carrica, M.C, Goldbaum, F.A, Marquez, J.A.
Deposit date:2016-10-28
Release date:2017-01-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-Dimensional Structure of Full-Length NtrX, an Unusual Member of the NtrC Family of Response Regulators.
J. Mol. Biol., 429, 2017
8WFX
DownloadVisualize
BU of 8wfx by Molmil
Cryo-EM structure of CRISPR-Csm effector complex from Mycobacterium canettii
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Huo, Y, Ma, X, Jiang, T.
Deposit date:2023-09-20
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Type-III-A structure of mycobacteria CRISPR-Csm complexes involving atypical crRNAs.
Int.J.Biol.Macromol., 260, 2024
3PY3
DownloadVisualize
BU of 3py3 by Molmil
Crystal structure of phosphorylated p38alpha MAP kinase
Descriptor: Mitogen-activated protein kinase 14
Authors:Zhang, Y.Y, Wu, J.W, Wang, Z.X.
Deposit date:2010-12-11
Release date:2011-03-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mitogen-activated Protein Kinase (MAPK) Phosphatase 3-mediated Cross-talk between MAPKs ERK2 and p38{alpha}.
J.Biol.Chem., 286, 2011
6ENL
DownloadVisualize
BU of 6enl by Molmil
INHIBITION OF ENOLASE: THE CRYSTAL STRUCTURES OF ENOLASE-CA2+-PHOSPHOGLYCERATE AND ENOLASE-ZN2+-PHOSPHOGLYCOLATE COMPLEXES AT 2.2-ANGSTROMS RESOLUTION
Descriptor: 2-PHOSPHOGLYCOLIC ACID, ENOLASE, ZINC ION
Authors:Lebioda, L, Stec, B.
Deposit date:1990-11-13
Release date:1992-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibition of enolase: the crystal structures of enolase-Ca2(+)- 2-phosphoglycerate and enolase-Zn2(+)-phosphoglycolate complexes at 2.2-A resolution.
Biochemistry, 30, 1991
4FG6
DownloadVisualize
BU of 4fg6 by Molmil
Structure of EcCLC E148A mutant in Glutamate
Descriptor: Fab fragment (Heavy chain), Fab fragment (Light chain), H(+)/Cl(-) exchange transporter ClcA
Authors:Feng, L, MacKinnon, R.
Deposit date:2012-06-04
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.019 Å)
Cite:Molecular mechanism of proton transport in CLC Cl-/H+ exchange transporters.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FAO
DownloadVisualize
BU of 4fao by Molmil
Specificity and Structure of a high affinity Activin-like 1 (ALK1) signaling complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activin receptor type-2B, Growth/differentiation factor 2, ...
Authors:Townson, S.A, Martinez-Hackert, E, Greppi, C, Lowden, P, Sako, D, Liu, J, Ucran, J.A, Liharska, K, Underwood, K.W, Seehra, J, Kumar, R, Grinberg, A.V.
Deposit date:2012-05-22
Release date:2012-06-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.357 Å)
Cite:Specificity and Structure of a High Affinity Activin Receptor-like Kinase 1 (ALK1) Signaling Complex.
J.Biol.Chem., 287, 2012
4FIV
DownloadVisualize
BU of 4fiv by Molmil
FIV PROTEASE COMPLEXED WITH AN INHIBITOR LP-130
Descriptor: 4-[2-(2-ACETYLAMINO-3-NAPHTALEN-1-YL-PROPIONYLAMINO)-4-METHYL-PENTANOYLAMINO]-3-HYDROXY-6-METHYL-HEPTANOIC ACID [1-(1-CARBAMOYL-2-NAPHTHALEN-1-YL-ETHYLCARBAMOYL)-PROPYL]-AMIDE, FELINE IMMUNODEFICIENCY VIRUS PROTEASE
Authors:Kervinen, J, Lubkowski, J, Zdanov, A, Wlodawer, A, Gustchina, A.
Deposit date:1998-07-15
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Toward a universal inhibitor of retroviral proteases: comparative analysis of the interactions of LP-130 complexed with proteases from HIV-1, FIV, and EIAV.
Protein Sci., 7, 1998
8YBE
DownloadVisualize
BU of 8ybe by Molmil
Cryo-EM structure of Maltose Binding Protein
Descriptor: Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Yoo, Y, Park, K, Kim, H.
Deposit date:2024-02-13
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Atomic resolution structure of MBP using Cryo-EM
To Be Published
1NH5
DownloadVisualize
BU of 1nh5 by Molmil
AUTOMATIC ASSIGNMENT OF NMR DATA AND DETERMINATION OF THE PROTEIN STRUCTURE OF A NEW WORLD SCORPION NEUROTOXIN USING NOAH/DIAMOD
Descriptor: Neurotoxin 5
Authors:Xu, Y, Jablonsky, M.J, Jackson, P.L, Krishna, N.R, Braun, W.
Deposit date:2002-12-18
Release date:2003-01-07
Last modified:2018-01-24
Method:SOLUTION NMR
Cite:Automatic assignment of NOESY Cross peaks and determination of the protein structure of a new world scorpion neurotoxin Using NOAH/DIAMOD
J.Magn.Reson., 148, 2001
8XAX
DownloadVisualize
BU of 8xax by Molmil
Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ...
Authors:An, Q, Deng, Z.
Deposit date:2023-12-05
Release date:2024-06-05
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 34, 2024
8XAU
DownloadVisualize
BU of 8xau by Molmil
Cryo-EM structure of HerA
Descriptor: ATP-binding protein
Authors:Wang, Y, Deng, Z.
Deposit date:2023-12-05
Release date:2024-06-05
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 34, 2024
8XAV
DownloadVisualize
BU of 8xav by Molmil
Cryo-EM structure of an anti-phage defense complex
Descriptor: ATP-binding protein, DUF4297
Authors:Wang, Y, Deng, Z.
Deposit date:2023-12-05
Release date:2024-06-05
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 34, 2024
8XAW
DownloadVisualize
BU of 8xaw by Molmil
Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ...
Authors:An, Q, Deng, Z.
Deposit date:2023-12-05
Release date:2024-06-05
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex.
Cell Res., 34, 2024
8Y0F
DownloadVisualize
BU of 8y0f by Molmil
Solution NMR structure of the PTK7-binding DNA aptamer sgc8c
Descriptor: DNA
Authors:He, A, Wan, L, Guo, P, Han, D.
Deposit date:2024-01-22
Release date:2024-06-26
Last modified:2024-07-24
Method:SOLUTION NMR
Cite:Structure-based investigation of a DNA aptamer targeting PTK7 reveals an intricate 3D fold guiding functional optimization.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XUR
DownloadVisualize
BU of 8xur by Molmil
BA.2.86 Spike Trimer in complex with heparan sulfate
Descriptor: 2-O-sulfo-beta-L-altropyranuronic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yue, C, Liu, P.
Deposit date:2024-01-14
Release date:2024-07-03
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity.
Natl Sci Rev, 11, 2024

225399

数据于2024-09-25公开中

PDB statisticsPDBj update infoContact PDBjnumon