PDB: 665 resultsInfo pagesStatus searchChemie searchBIRD

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8F26	Structure of a 60mer DegP cage bound to the client protein hTRF1 Descriptor: Periplasmic serine endoprotease DegP, Telomeric repeat-binding factor 1 Authors: Harkness, R.W, Ripstein, Z.A, Di Trani, J.M, Kay, L.E. Deposit date: 2022-11-07 Release date: 2022-11-23 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (9.7 Å) Cite: Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP. J.Am.Chem.Soc., 145, 2023
8GI4	Crystal structure of human LIMK2 PDZ domain Descriptor: LIM domain kinase 2 Authors: Casanova Sepulveda, G, Boggon, T.J. Deposit date: 2023-03-13 Release date: 2023-12-06 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.06 Å) Cite: Autoregulation of the LIM kinases by their PDZ domain. Nat Commun, 14, 2023
8HCK	NMR fragment-based screening against the two PDZ do-mains of MDA-9 Descriptor: 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE, GLYCEROL, SULFATE ION, ... Authors: Tang, H. Deposit date: 2022-11-01 Release date: 2023-11-08 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2 Å) Cite: NMR fragment-based screening against the two PDZ do-mains of MDA-9 To Be Published
8HU2	Rattus Syntenin-1 PDZ domain with inhibitor Descriptor: (2~{S})-2-(9~{H}-fluoren-9-ylmethoxycarbonylamino)-3-(4-oxidanylidene-5~{H}-pyrimidin-2-yl)propanoic acid, Syntenin-1 Authors: Heo, Y, Lee, J, Yun, J.H, Lee, W. Deposit date: 2022-12-22 Release date: 2024-01-17 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of STNPDZ with inhibitor at 1.60 Angstroms resolution. To Be Published
8KIC	Bacterial serine protease Descriptor: Lysozyme fragment (unknown sequence), peptidase Do Authors: Lee, I.-G, Jeon, H. Deposit date: 2023-08-23 Release date: 2024-09-04 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Structure of bacterial serine protease To Be Published
8OEP	Crystal structure of the PTPN3 PDZ domain bound to the HPV18 E6 oncoprotein C-terminal peptide Descriptor: Protein E6, SODIUM ION, Tyrosine-protein phosphatase non-receptor type 3 Authors: Genera, M, Colcombet-Cazenave, B, Croitoru, A, Raynal, B, Mechaly, A, Caillet, J, Haouz, A, Wolff, N, Caillet-Saguy, C. Deposit date: 2023-03-11 Release date: 2023-05-10 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Interactions of the protein tyrosine phosphatase PTPN3 with viral and cellular partners through its PDZ domain: insights into structural determinants and phosphatase activity. Front Mol Biosci, 10, 2023
8T1J	Uncrosslinked nNOS-CaM oxygenase homodimer Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric oxide synthase 1, ... Authors: Lee, K, Pospiech, T.H, Southworth, D. Deposit date: 2023-06-02 Release date: 2023-11-29 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Mapping interactions of calmodulin and neuronal NO synthase by crosslinking and mass spectrometry. J.Biol.Chem., 300, 2023
8T1K	DSBU crosslinked nNOS-CaM oxygenase homodimer Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, Nitric oxide synthase 1, ... Authors: Lee, K, Pospiech, T.H, Southworth, D. Deposit date: 2023-06-02 Release date: 2023-11-29 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Mapping interactions of calmodulin and neuronal NO synthase by crosslinking and mass spectrometry. J.Biol.Chem., 300, 2023
8W69	DegQ-b-casein complex Descriptor: Casein fragment, peptidase Do Authors: Lee, I.-G, Jeon, H. Deposit date: 2023-08-28 Release date: 2024-09-11 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structure of E. coli Deg-b-casein complex To Be Published
8WM9	Fzd4/DEP complex Descriptor: CHOLESTEROL HEMISUCCINATE, Frizzled-4, Segment polarity protein dishevelled homolog DVL-2 Authors: He, Y, Qian, Y. Deposit date: 2023-10-03 Release date: 2024-09-11 Last modified: 2024-11-13 Method: ELECTRON MICROSCOPY (3.53 Å) Cite: Structural basis of Frizzled 4 in recognition of Dishevelled 2 unveils mechanism of WNT signaling activation. Nat Commun, 15, 2024
8WMA	Fzd4/DEP complex (local refined) Descriptor: Frizzled-4, Segment polarity protein dishevelled homolog DVL-2 Authors: He, Y, Qian, Y. Deposit date: 2023-10-03 Release date: 2024-09-11 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (3.47 Å) Cite: Structural basis of Frizzled 4 in recognition of Dishevelled 2 unveils mechanism of WNT signaling activation. Nat Commun, 15, 2024
8WWR	Crystal structure of apo human dishevelled 2 (Dvl2) PDZ domain Descriptor: Segment polarity protein dishevelled homolog DVL-2 Authors: Omble, A, Mahajan, S, Kulkarni, K.A. Deposit date: 2023-10-26 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Dishevelled2 activates WGEF via its interaction with a unique internal peptide motif of the GEF. Commun Biol, 7, 2024
8XUD	Crystal structure of adaptor NlpI in complex with endopeptidase MepS and PDZ-protease Prc Descriptor: Lipoprotein NlpI, Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase, PHOSPHATE ION, ... Authors: Tzeng, S.R, Wang, S, Huang, C.H. Deposit date: 2024-01-12 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (3.49 Å) Cite: Crystal structure of lipoprotein NlpI in complex with MepS To Be Published
8YR7	Crystal structure of human dishevelled 2 (Dvl2) PDZ domain fused with WGEF internal peptide motif Descriptor: Segment polarity protein dishevelled homolog DVL-2,Rho guanine nucleotide exchange factor 19 Authors: Omble, A, Mahajan, S, Kulkarni, K.A. Deposit date: 2024-03-20 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (3 Å) Cite: Dishevelled2 activates WGEF via its interaction with a unique internal peptide motif of the GEF. Commun Biol, 7, 2024
9IMP	The complex of PDZ3 and PBM Descriptor: INSC spindle orientation adaptor protein, Partitioning defective 3 homolog Authors: Huang, S.J. Deposit date: 2024-07-04 Release date: 2024-09-11 Last modified: 2024-09-18 Method: X-RAY DIFFRACTION (2.87 Å) Cite: mInsc coordinates Par3 and NuMA condensates for assembly of the spindle orientation machinery in asymmetric cell division. Int.J.Biol.Macromol., 279, 2024

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