PDB: 95574 resultsInfo pagesStatus searchChemie searchBIRD

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7TES	Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 in Non-active1 conformation Descriptor: Fab5 heavy chain, Fab5 light chain, Glutamate receptor ionotropic, ... Authors: Tajima, N, Furukawa, H. Deposit date: 2022-01-05 Release date: 2022-03-02 Method: ELECTRON MICROSCOPY (4.7 Å) Cite: Development and characterization of functional antibodies targeting NMDA receptors. Nat Commun, 13, 2022
7TER	Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 non-active2 conformation Descriptor: Fab5 heavy chain, Fab5 light chain, Glutamate receptor ionotropic, ... Authors: Tajima, N, Furukawa, H. Deposit date: 2022-01-05 Release date: 2022-03-02 Method: ELECTRON MICROSCOPY (5.23 Å) Cite: Development and characterization of functional antibodies targeting NMDA receptors. Nat Commun, 13, 2022
7TEE	Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 Non-active2-like Descriptor: Fab2 heavy chain, Fab2 light chain, Glutamate receptor ionotropic, ... Authors: Tajima, N, Furukawa, H. Deposit date: 2022-01-04 Release date: 2022-03-02 Method: ELECTRON MICROSCOPY (6.59 Å) Cite: Development and characterization of functional antibodies targeting NMDA receptors. Nat Commun, 13, 2022
7TET	Cryo-EM structure of GluN1b-2B NMDAR in complex with Fab5 in non-active2-like conformation Descriptor: Fab5 heavy chain, Fab5 light chain, Glutamate receptor ionotropic, ... Authors: Tajima, N, Furukawa, H. Deposit date: 2022-01-05 Release date: 2022-03-02 Method: ELECTRON MICROSCOPY (4.45 Å) Cite: Development and characterization of functional antibodies targeting NMDA receptors. Nat Commun, 13, 2022
3CX6	Crystal Structure of PDZRhoGEF rgRGS Domain in a Complex with Galpha-13 Bound to GDP Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein alpha-13 subunit, MAGNESIUM ION, ... Authors: Sprang, S.R, Chen, Z. Deposit date: 2008-04-23 Release date: 2008-10-28 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Recognition of the Activated States of Galpha13 by the rgRGS Domain of PDZRhoGEF. Structure, 16, 2008
3CQP	Human SOD1 G85R Variant, Structure I Descriptor: COPPER (II) ION, MALONATE ION, Superoxide dismutase [Cu-Zn], ... Authors: Cao, X, Antonyuk, S, Seetharaman, S.V, Whitson, L.J, Taylor, A.B, Holloway, S.P, Strange, R.W, Doucette, P.A, Valentine, J.S, Tiwari, A, Hayward, L.J, Padua, S, Cohlberg, J.A, Hasnain, S.S, Hart, P.J. Deposit date: 2008-04-03 Release date: 2008-04-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structures of the G85R Variant of SOD1 in Familial Amyotrophic Lateral Sclerosis. J.Biol.Chem., 283, 2008
3D2B	Structure of 2D9, a thermostable mutant of Bacillus subtilis lipase obtained through directed evolution Descriptor: Lipase Authors: Sankaranarayanan, R, Kamal, M.Z. Deposit date: 2008-05-08 Release date: 2008-06-03 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Thermostable Bacillus subtilis lipases: in vitro evolution and structural insight J.Mol.Biol., 381, 2008
3D8C	Factor inhibiting HIF-1 alpha D201G mutant in complex with ZN(II), alpha-ketoglutarate and HIF-1 alpha 19mer Descriptor: 2-OXOGLUTARIC ACID, GLYCEROL, HYPOXIA-INDUCIBLE FACTOR 1 ALPHA, ... Authors: McDonough, M.A, Chowdhury, R, Schofield, C.J. Deposit date: 2008-05-23 Release date: 2008-08-12 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Evidence that two enzyme-derived histidine ligands are sufficient for iron binding and catalysis by factor inhibiting HIF (FIH). J.Biol.Chem., 283, 2008
3DA4	Crystal Structure of Colicin M, a Novel Phosphatase Specifically Imported by Escherichia Coli Descriptor: Colicin-M, NITRATE ION Authors: Zeth, K, Albrecht, R, Romer, C, Braun, V. Deposit date: 2008-05-28 Release date: 2008-07-29 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of colicin M, a novel phosphatase specifically imported by Escherichia coli J.Biol.Chem., 283, 2008
3D8H	Crystal structure of phosphoglycerate mutase from Cryptosporidium parvum, cgd7_4270 Descriptor: Glycolytic phosphoglycerate mutase Authors: Wernimont, A.K, Lew, J, Wasney, G, Alam, Z, Kozieradzki, I, Cossar, D, Schapiro, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Wilkstrom, M, Edwards, A.M, Hui, R, Artz, J.D, Hills, T, Structural Genomics Consortium (SGC) Deposit date: 2008-05-23 Release date: 2008-07-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Characterization of a new phosphatase from Plasmodium. Mol.Biochem.Parasitol., 179, 2011
8BPO	Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 (TTC5) and S-phase Cyclin A Associated Protein residing in the ER (SCAPER) Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... Authors: Hopfler, M, Absmeier, E, Passmore, L.A, Hegde, R.S. Deposit date: 2022-11-17 Release date: 2023-07-05 Last modified: 2023-07-19 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Mechanism of ribosome-associated mRNA degradation during tubulin autoregulation. Mol.Cell, 83, 2023
8E7E	Cryo-EM structure of cardiac amyloid fibril from a variant ATTR I84S amyloidosis patient Descriptor: Transthyretin Authors: Nguyen, B.A, Singh, V, Afrin, S, Saelices, L. Deposit date: 2022-08-23 Release date: 2023-08-30 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.61 Å) Cite: Structural polymorphism of amyloid fibrils in ATTR amyloidosis revealed by cryo-electron microscopy. Nat Commun, 15, 2024
3KKI	PLP-Dependent Acyl-CoA transferase CqsA Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CAI-1 autoinducer synthase, MAGNESIUM ION, ... Authors: Kelly, R.C, Jeffrey, P.D, Hughson, F.M. Deposit date: 2009-11-05 Release date: 2009-11-24 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: The Vibrio cholerae quorum-sensing autoinducer CAI-1: analysis of the biosynthetic enzyme CqsA. Nat.Chem.Biol., 5, 2009
3OD8	Human PARP-1 zinc finger 1 (Zn1) bound to DNA Descriptor: 5'-D(*CP*CP*CP*AP*AP*GP*CP*GP*GP*C)-3', 5'-D(*GP*CP*CP*GP*CP*TP*TP*GP*GP*G)-3', Poly [ADP-ribose] polymerase 1, ... Authors: Pascal, J.M, Langelier, M.-F. Deposit date: 2010-08-11 Release date: 2011-01-12 Last modified: 2017-11-08 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal Structures of Poly(ADP-ribose) Polymerase-1 (PARP-1) Zinc Fingers Bound to DNA: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO DNA-DEPENDENT PARP-1 ACTIVITY. J.Biol.Chem., 286, 2011
8WGH	Cryo-EM structure of the red-shifted Fittonia albivenis PSI-LHCI Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... Authors: Huang, G.Q, Li, X.X, Sui, S.F, Qin, X.C. Deposit date: 2023-09-21 Release date: 2024-07-10 Last modified: 2024-08-07 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Structure of the red-shifted Fittonia albivenis photosystem I. Nat Commun, 15, 2024
7JRI	High-resolution Crystal Structures of Transient Intermediates in the Phytochrome Photocycle, 33 ms structure Descriptor: 3-[2-[[5-[[(3E,4S)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP Authors: Schmidt, M, Stojkovic, E. Deposit date: 2020-08-12 Release date: 2021-04-07 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.4 Å) Cite: High-resolution crystal structures of transient intermediates in the phytochrome photocycle. Structure, 29, 2021
8FP5	CDK2 liganded with ATP and Mg2+ Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Cyclin-dependent kinase 2, ... Authors: Schonbrunn, E, Sun, L. Deposit date: 2023-01-04 Release date: 2023-05-31 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding. Nat Commun, 14, 2023
8FP0	Ternary complex of CDK2 with small molecule ligands TW8672 and Roscovitine Descriptor: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-nitrobenzoic acid, Cyclin-dependent kinase 2, ... Authors: Schonbrunn, E, Sun, L. Deposit date: 2023-01-03 Release date: 2023-05-31 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding. Nat Commun, 14, 2023
6PAD	Binding of chloromethyl ketone substrate analogues to crystalline papain Descriptor: Nalpha-[(benzyloxy)carbonyl]-N-[(1S)-3-chloro-1-methyl-2-oxopropyl]-L-phenylalaninamide, PAPAIN Authors: Drenth, J, Kalk, K.H, Swen, H.M. Deposit date: 1976-11-01 Release date: 1977-04-12 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Binding of chloromethyl ketone substrate analogues to crystalline papain. Biochemistry, 15, 1976
4GAA	Structure of Leukotriene A4 hydrolase from Xenopus laevis complexed with inhibitor bestatin Descriptor: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, MGC78867 protein, ZINC ION Authors: Stsiapanava, A, Kumar, R.B, Haeggstrom, J.Z, Rinaldo-Matthis, A. Deposit date: 2012-07-25 Release date: 2013-06-12 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Product formation controlled by substrate dynamics in leukotriene A4 hydrolase. Biochim.Biophys.Acta, 1844, 2014
5HT7	Crystal structure of a transition-metal-ion-binding betagamma-crystallin from Methanosaeta thermophila Descriptor: FE (II) ION, Uncharacterized protein Authors: Srivastava, S.S, Sankaranarayanan, R. Deposit date: 2016-01-26 Release date: 2017-02-01 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.862 Å) Cite: A Transition Metal-Binding, Trimeric beta gamma-Crystallin from Methane-Producing Thermophilic Archaea, Methanosaeta thermophila Biochemistry, 56, 2017
1NYN	Solution NMR Structure of Protein YHR087W from Saccharomyces cerevisiae. Northeast Structural Genomics Consortium Target YTYST425. Descriptor: Hypothetical 12.0 kDa protein in NAM8-GAR1 intergenic region Authors: Cort, J.R, Yee, A.A, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) Deposit date: 2003-02-13 Release date: 2003-04-08 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: The Shwachman-Bodian-Diamond syndrome protein family is involved in RNA metabolism. J.Biol.Chem., 280, 2005
4GLU	Crystal structure of the mirror image form of VEGF-A Descriptor: ACETATE ION, D- Vascular endothelial growth factor-A, GLYCEROL, ... Authors: Mandal, K, Uppalapati, M, Ault-Riche, D, Kenney, J, Lowitz, J, Sidhu, S, Kent, S.B.H. Deposit date: 2012-08-14 Release date: 2012-09-05 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Chemical synthesis and X-ray structure of a heterochiral {D-protein antagonist plus vascular endothelial growth factor} protein complex by racemic crystallography. Proc.Natl.Acad.Sci.USA, 109, 2012
4WLT	High pressure protein crystallography of hen egg white lysozyme at 190 MPa Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION Authors: Yamada, H, Nagae, T, Watanabe, N. Deposit date: 2014-10-08 Release date: 2015-04-08 Last modified: 2020-02-05 Method: X-RAY DIFFRACTION (1.6 Å) Cite: High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015
4WM6	High pressure protein crystallography of hen egg white lysozyme at 950 MPa Descriptor: Lysozyme C, SODIUM ION Authors: Yamada, H, Watanabe, N, Nagae, T. Deposit date: 2014-10-08 Release date: 2015-04-08 Last modified: 2019-07-24 Method: X-RAY DIFFRACTION (1.85 Å) Cite: High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015

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