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1EVN	NMR OBSERVATION OF A-TETRAD Descriptor: DNA (5'-D(*AP*GP*GP*GP*T)-3') Authors: Patel, P.K, Koti, A.S.R, Hosur, R.V. Deposit date: 2000-04-20 Release date: 2000-05-22 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR studies on truncated sequences of human telomeric DNA: observation of a novel A-tetrad. Nucleic Acids Res., 27, 1999
1DV0	Refined NMR solution structure of the C-terminal UBA domain of the human homologue of RAD23A (HHR23A) Descriptor: DNA REPAIR PROTEIN HHR23A Authors: Withers-Ward, E.S, Mueller, T.D, Chen, I.S, Feigon, J. Deposit date: 2000-01-19 Release date: 2000-02-11 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Biochemical and structural analysis of the interaction between the UBA(2) domain of the DNA repair protein HHR23A and HIV-1 Vpr Biochemistry, 39, 2000
3AL2	Crystal Structure of TopBP1 BRCT7/8 Descriptor: DNA topoisomerase 2-binding protein 1, SULFATE ION Authors: Leung, C.C, Glover, J.N. Deposit date: 2010-07-22 Release date: 2010-12-01 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2 Å) Cite: Molecular basis of BACH1/FANCJ recognition by TopBP1 in DNA replication checkpoint control J.Biol.Chem., 286, 2011
3AL3	Crystal Structure of TopBP1 BRCT7/8-BACH1 peptide complex Descriptor: DNA topoisomerase 2-binding protein 1, FORMIC ACID, Peptide of Fanconi anemia group J protein Authors: Leung, C.C, Glover, J.N. Deposit date: 2010-07-22 Release date: 2010-12-01 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Molecular basis of BACH1/FANCJ recognition by TopBP1 in DNA replication checkpoint control J.Biol.Chem., 286, 2011
3CWV	Crystal structure of B-subunit of the DNA gyrase from Myxococcus xanthus Descriptor: DNA gyrase, B subunit, truncated Authors: Ramagopal, U.A, Toro, R, Meyer, A.J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2008-04-22 Release date: 2008-05-06 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of B-subunit of the DNA gyrase from Myxococcus xanthus. To be published
5WTU	Crystal structure of DndE G21/24K mutant involved in DNA phosphorothioation Descriptor: DNA sulfur modification protein DndE Authors: Yao, P, Liu, Y, Wang, C, Cao, C. Deposit date: 2016-12-14 Release date: 2018-02-21 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal structure of DndE G21/24K mutant involved in DNA phosphorothioation To Be Published
1EVM	NMR OBSERVATION OF A-TETRAD Descriptor: DNA (5'-D(*AP*GP*GP*GP*T)-3') Authors: Patel, P.K, Koti, A.S.R, Hosur, R.V. Deposit date: 2000-04-20 Release date: 2000-05-22 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR studies on truncated sequences of human telomeric DNA: observation of a novel A-tetrad. Nucleic Acids Res., 27, 1999
2E2W	Solution structure of the first BRCT domain of human DNA ligase IV Descriptor: DNA ligase 4 Authors: Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-11-17 Release date: 2006-12-05 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the first BRCT domain of human DNA ligase IV TO BE PUBLISHED
2M6V	Solution NMR structure of the d(GGGTTGGGTTTTGGGTGGG) quadruplex in sodium conditions Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*TP*GP*GP*G)-3') Authors: Karsisiotis, A.I, Webba da Silva, M. Deposit date: 2013-04-10 Release date: 2014-07-16 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Encoding canonical DNA quadruplex structure. Sci Adv, 4, 2018
2KTF	Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin Descriptor: DNA polymerase iota, Ubiquitin Authors: Cui, G, Benirschke, R, Mer, G. Deposit date: 2010-02-01 Release date: 2010-11-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
1EHV	A NEW CRYSTAL STRUCTURE FOR THE DODECAMER C-G-C-G-A-A-T-T-C-G-C-G: SYMMETRY EFFECTS ON SEQUENCE-DEPENDENT DNA STRUCTURE Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') Authors: Johansson, E.M. Deposit date: 2000-02-23 Release date: 2000-07-14 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure. J.Mol.Biol., 300, 2000
2L0G	Solution NMR structure of ubiquitin-binding motif (UBM2) of human polymerase iota Descriptor: DNA polymerase iota Authors: Cui, G, Benirschke, R, Mer, G. Deposit date: 2010-07-01 Release date: 2010-11-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
2L0F	Solution NMR structure of human polymerase iota UBM2 (P692A mutant) in complex with ubiquitin Descriptor: DNA polymerase iota, Ubiquitin Authors: Cui, G, Benirschke, R, Mer, G. Deposit date: 2010-07-01 Release date: 2010-11-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
3QKU	Mre11 Rad50 binding domain in complex with Rad50 and AMP-PNP Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase, MAGNESIUM ION, ... Authors: Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A. Deposit date: 2011-02-01 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.3 Å) Cite: ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair. Nat.Struct.Mol.Biol., 18, 2011
3QKR	Mre11 Rad50 binding domain bound to Rad50 Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase, PHOSPHATE ION Authors: Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A. Deposit date: 2011-02-01 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.4 Å) Cite: ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair. Nat.Struct.Mol.Biol., 18, 2011
386D	THREE-DIMENSIONAL STRUCTURE AND REACTIVITY OF A PHOTOCHEMICAL CLEAVAGE AGENT BOUND TO DNA Descriptor: DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), N,N-BIS(3-AMINOPROPYL)-2-ANTHRAQUINONESULFONAMIDE Authors: Gasper, S.M, Armitage, B, Shui, X, Hu, G.G, Yu, C, Schuster, G, Williams, L.D. Deposit date: 1998-03-11 Release date: 1998-03-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Three-Dimensional Structure and Reactivity of a Photochemical Cleavage Agent Bound to DNA J.Am.Chem.Soc., 120, 1998
3QKS	Mre11 Rad50 binding domain bound to Rad50 Descriptor: DNA double-strand break repair protein mre11, DNA double-strand break repair rad50 ATPase Authors: Williams, G.J, Williams, R.S, Arvai, A, Moncalian, G, Tainer, J.A. Deposit date: 2011-02-01 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: ABC ATPase signature helices in Rad50 link nucleotide state to Mre11 interface for DNA repair. Nat.Struct.Mol.Biol., 18, 2011
240D	EFFECT OF END BASE STEPS ON DNA FORM: CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCGGGCCCGG) Descriptor: DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3') Authors: Champion, D, Kumar, C.S, Ramakrishnan, B, Gautham, N, Viswamitra, M.A. Deposit date: 1995-11-08 Release date: 1996-06-20 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: Effect of End Base Steps on DNA Form: Crystal Structure of the A-DNA Decamer d(CCGGGCCCGG) To be Published
2QS6	Structure of a Hoogsteen antiparallel duplex with extra-helical thymines Descriptor: DNA (5'-D(*DAP*DTP*DAP*DTP*DAP*DTP*DCP*DT)-3') Authors: Pous, J, Urpi, L, Subirana, J.A, Gouyette, C, Navaza, J, Campos, J.L. Deposit date: 2007-07-30 Release date: 2008-03-25 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.08 Å) Cite: Stabilization by extra-helical thymines of a DNA duplex with Hoogsteen base pairs. J.Am.Chem.Soc., 130, 2008
6FRG	Crystal structure of G-1F mutant of Ssp DnaB Mini-Intein variant M86 Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Replicative DNA helicase, ... Authors: Popp, M.A, Blankenfeldt, W, Friedel, K, Mootz, H.D. Deposit date: 2018-02-15 Release date: 2019-01-30 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.535 Å) Cite: A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidine. Chem Sci, 10, 2019
2FAQ	Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with ATP and Manganese Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ... Authors: Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S. Deposit date: 2005-12-07 Release date: 2006-05-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D Proc.Natl.Acad.Sci.USA, 103, 2006
2FHD	Crystal structure of Crb2 tandem tudor domains Descriptor: DNA repair protein rhp9/CRB2, PHOSPHATE ION Authors: Lee, J, Botuyan, M.V, Thompson, J.R, Mer, G. Deposit date: 2005-12-23 Release date: 2007-01-02 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair. Cell(Cambridge,Mass.), 127, 2006
2FAO	Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain Descriptor: SULFATE ION, probable ATP-dependent DNA ligase Authors: Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S. Deposit date: 2005-12-07 Release date: 2006-05-23 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D Proc.Natl.Acad.Sci.USA, 103, 2006
2FAR	Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with dATP and Manganese Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ... Authors: Zhu, H, Nandakumar, J, Aniukwu, J, Wang, L.K, Glickman, M.S, Lima, C.D, Shuman, S. Deposit date: 2005-12-07 Release date: 2006-05-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D Proc.Natl.Acad.Sci.USA, 103, 2006
1KOY	NMR structure of DFF-C domain Descriptor: DNA fragmentation factor alpha subunit Authors: Fukushima, K, Kikuchi, J, Koshiba, S, Kigawa, T, Kuroda, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2001-12-25 Release date: 2002-09-04 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the DFF-C domain of DFF45/ICAD. A structural basis for the regulation of apoptotic DNA fragmentation. J.Mol.Biol., 321, 2002

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