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4MMZ
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BU of 4mmz by Molmil
Integrin AlphaVBeta3 ectodomain bound to an antagonistic tenth domain of Fibronectin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fibronectin, ...
Authors:van Agthoven, J, Xiong, J, Arnaout, M.A.
Deposit date:2013-09-09
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for pure antagonism of integrin alpha V beta 3 by a high-affinity form of fibronectin.
Nat.Struct.Mol.Biol., 21, 2014
1YG4
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BU of 1yg4 by Molmil
Solution Structure of the ScYLV P1-P2 Frameshifting Pseudoknot, Regularized Average Structure
Descriptor: ScYLV RNA pseudoknot
Authors:Cornish, P.V, Hennig, M, Giedroc, D.P.
Deposit date:2005-01-04
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A loop 2 cytidine-stem 1 minor groove interaction as a positive determinant for pseudoknot-stimulated -1 ribosomal frameshifting
Proc.Natl.Acad.Sci.USA, 102, 2005
5N3B
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BU of 5n3b by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 2-(pyridin-3-yl)ethanamine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-pyridin-3-ylethylazanium, cAMP dependent protein kinase inhibitor alpha-like protein, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
5N3N
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BU of 5n3n by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule [(2R)-2,4-dihydroxy-4-oxobutyl]-trimethylazanium
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CARNITINE, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.224 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To be Published
5N1O
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BU of 5n1o by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 2-chloro-4-(chloromethyl)-5-hydroxyphenyl)ethan-1-one
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-[5-chloranyl-3-(chloromethyl)-2-oxidanyl-phenyl]ethanone, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-06
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
5N32
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BU of 5n32 by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-chlorobenzyl carbamimidothioate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, [azanyl-[(4-chlorophenyl)methylsulfanyl]methylidene]azanium, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.833 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
5N3J
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BU of 5n3j by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-Nitrobenzoic acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-NITROBENZOIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N1K
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BU of 5n1k by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 2-amino-1-(4-fluorophenyl)ethanol
Descriptor: (1S)-2-amino-1-(4-fluorophenyl)ethanol, DIMETHYL SULFOXIDE, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-06
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
5N3O
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BU of 5n3o by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 3-(1,3-oxazol-5-yl)aniline
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-(1,3-oxazol-5-yl)aniline, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
2AWE
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BU of 2awe by Molmil
Base-Tetrad Swapping Results in Dimerization of RNA Quadruplexes: Implications for Formation of I-Motif RNA Octaplex
Descriptor: 5'-R(*UP*(BGM)P*GP*UP*GP*U)-3', POTASSIUM ION, STRONTIUM ION
Authors:Pan, B, Shi, K, Sundaralingam, M.
Deposit date:2005-08-31
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Base-tetrad swapping results in dimerization of RNA quadruplexes: implications for formation of the i-motif RNA octaplex.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5N1L
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BU of 5n1l by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 2,5-dimethyl-N-pyridin-4-ylfuran-3-carboxamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2,5-dimethyl-N-(pyridin-4-yl)furan-3-carboxamide, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-06
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.489 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
1YFH
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BU of 1yfh by Molmil
wt Human O6-Alkylguanine-DNA Alkyltransferase Bound To DNA Containing an Alkylated Cytosine
Descriptor: 5'-D(*CP*CP*TP*AP*CP*AP*CP*AP*CP*AP*TP*CP*CP*AP*CP*A)-3', 5'-D(*GP*TP*GP*GP*AP*TP*GP*(XCY)P*GP*TP*GP*TP*AP*GP*GP*T)-3', Methylated-DNA--protein-cysteine methyltransferase, ...
Authors:Duguid, E.M, Rice, P.A, He, C.
Deposit date:2004-12-31
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:The structure of the human AGT protein bound to DNA and its implications for damage detection.
J.Mol.Biol., 350, 2005
1YG3
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BU of 1yg3 by Molmil
Solution Structure of the ScYLV P1-P2 Frameshifting Pseudoknot, 20 Lowest Energy Structures
Descriptor: ScYLV RNA pseudoknot
Authors:Cornish, P.V, Hennig, M, Giedroc, D.P.
Deposit date:2005-01-04
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A loop 2 cytidine-stem 1 minor groove interaction as a positive determinant for pseudoknot-stimulated -1 ribosomal frameshifting
Proc.Natl.Acad.Sci.USA, 102, 2005
5N1N
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BU of 5n1n by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 2-chloro-9-propan-2-ylpurine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-chloranyl-9-methyl-purine, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-06
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.405 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
2AHE
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BU of 2ahe by Molmil
Crystal structure of a soluble form of CLIC4. intercellular chloride ion channel
Descriptor: Chloride intracellular channel protein 4
Authors:Littler, D.R, Assaad, N.N, Harrop, S.J, Brown, L.J, Pankhurst, G.J, Luciani, P, Aguilar, M.-I, Mazzanti, M, Berryman, M.A, Breit, S.N, Curmi, P.M.G.
Deposit date:2005-07-28
Release date:2005-08-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the soluble form of the redox-regulated chloride ion channel protein CLIC4.
FEBS J., 272, 2005
4NE3
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BU of 4ne3 by Molmil
Human MHF1-MHF2 complex
Descriptor: Centromere protein S, Centromere protein X
Authors:Zhao, Q, Saro, D, Sachpatzidis, A, Sung, P, Xiong, Y.
Deposit date:2013-10-28
Release date:2013-12-25
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (1.8007 Å)
Cite:The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
Nat Commun, 5, 2014
5N3C
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BU of 5n3c by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule Thiophene-3-Carboximidamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, [azanyl(thiophen-3-yl)methylidene]azanium, cAMP dependent protein kinase inhibitor alpha-like protein, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.772 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N3Q
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BU of 5n3q by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 3-Aminobenzamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-aminobenzamide, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N1E
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BU of 5n1e by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule N-(1,3-benzodioxol-5-yl)-2-piperidin-1-ylacetamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-06
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.529 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published
6CIQ
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BU of 6ciq by Molmil
Pyruvate:ferredoxin oxidoreductase from Moorella thermoacetica with coenzyme A bound
Descriptor: COENZYME A, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2018-02-24
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Binding site for coenzyme A revealed in the structure of pyruvate:ferredoxin oxidoreductase fromMoorella thermoacetica.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5N33
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BU of 5n33 by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 3-amino-5-(trifluoromethyl)-1H-pyridin-2-one
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-azanyl-5-(trifluoromethyl)-1~{H}-pyridin-2-one, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.434 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N3H
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BU of 5n3h by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule pyridine-3-carboxamide
Descriptor: DIMETHYL SULFOXIDE, NICOTINAMIDE, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5Y39
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BU of 5y39 by Molmil
Crystal structure of Ragulator complex (p18 76-145)
Descriptor: Ragulator complex protein LAMTOR1, Ragulator complex protein LAMTOR2, Ragulator complex protein LAMTOR3, ...
Authors:Zhang, T, Ding, J.
Deposit date:2017-07-28
Release date:2017-12-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for Ragulator functioning as a scaffold in membrane-anchoring of Rag GTPases and mTORC1
Nat Commun, 8, 2017
5ZKI
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BU of 5zki by Molmil
Human EXOG-H140A in complex with duplex DNA
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Wu, C.C, Lin, J.L.J, Yuan, H.S.
Deposit date:2018-03-24
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.321 Å)
Cite:A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication.
Nucleic Acids Res., 47, 2019
5N1H
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BU of 5n1h by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule Methyl 4-(aminomethyl)benzoate
Descriptor: (4-methoxycarbonylphenyl)methylazanium, (4S)-2-METHYL-2,4-PENTANEDIOL, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-06
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:A crystallographic fragment study with cAMP-dependent protein kinase A
To Be Published

224004

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