Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4JI8
DownloadVisualize
BU of 4ji8 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.742 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
1XMO
DownloadVisualize
BU of 1xmo by Molmil
Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
4JI7
DownloadVisualize
BU of 4ji7 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4GZ0
DownloadVisualize
BU of 4gz0 by Molmil
Mus Musculus Tdp2-DNA Substrate Analog (5'-6-aminohexanol) Complex
Descriptor: 1,2-ETHANEDIOL, 6-aminohexan-1-ol, ACETATE ION, ...
Authors:Schellenberg, M.J, Williams, R.S.
Deposit date:2012-09-05
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.113 Å)
Cite:Mechanism of repair of 5'-topoisomerase II-DNA adducts by mammalian tyrosyl-DNA phosphodiesterase 2.
Nat.Struct.Mol.Biol., 19, 2012
4H1T
DownloadVisualize
BU of 4h1t by Molmil
X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Sotnichenko, S.E, Betzel, C, Mikhailov, A.M.
Deposit date:2012-09-11
Release date:2013-09-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.924 Å)
Cite:X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution.
TO BE PUBLISHED
1XNQ
DownloadVisualize
BU of 1xnq by Molmil
Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center
Descriptor: 16S ribosomal RNA, Anticodon tRNA, MAGNESIUM ION, ...
Authors:Murphy, F.V, Ramakrishnan, V.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004
4GQ1
DownloadVisualize
BU of 4gq1 by Molmil
Nup37 of S. pombe
Descriptor: Nup37, SULFATE ION
Authors:Liu, X, Mitchell, J, Wozniak, R, Blobel, G, Fan, J.
Deposit date:2012-08-22
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural evolution of the membrane-coating module of the nuclear pore complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
4H2P
DownloadVisualize
BU of 4h2p by Molmil
Tetrameric form of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase (MHPCO)
Descriptor: 1,2-ETHANEDIOL, 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, ...
Authors:Kobayashi, J, Yoshida, H, Mikami, B, Hayashi, H, Kamitori, S, Yagi, T.
Deposit date:2012-09-13
Release date:2013-09-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.981 Å)
Cite:Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be Published
4I42
DownloadVisualize
BU of 4i42 by Molmil
E.coli. 1,4-dihydroxy-2-naphthoyl coenzyme A synthase (ecMenB) in complex with 1-hydroxy-2-naphthoyl-CoA
Descriptor: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, 1-hydroxy-2-naphthoyl-CoA, ...
Authors:Sun, Y, Song, H, Li, J, Li, Y, Jiang, M, Zhou, J, Guo, Z.
Deposit date:2012-11-27
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.848 Å)
Cite:Structural basis of the induced-fit mechanism of 1,4-dihydroxy-2-naphthoyl coenzyme A synthase from the crotonase fold superfamily
Plos One, 8, 2013
1YCE
DownloadVisualize
BU of 1yce by Molmil
Structure of the rotor ring of F-type Na+-ATPase from Ilyobacter tartaricus
Descriptor: NONAN-1-OL, SODIUM ION, subunit c
Authors:Meier, T, Polzer, P, Diederichs, K, Welte, W, Dimroth, P.
Deposit date:2004-12-22
Release date:2005-04-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the rotor ring of F-Type Na+-ATPase from Ilyobacter tartaricus.
Science, 308, 2005
4JI3
DownloadVisualize
BU of 4ji3 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy, F.V, Murphy, E.L, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4H2H
DownloadVisualize
BU of 4h2h by Molmil
Crystal structure of an enolase (mandalate racemase subgroup, target EFI-502101) from Pelagibaca bermudensis htcc2601, with bound mg and l-4-hydroxyproline betaine (betonicine)
Descriptor: (2S,4R)-4-hydroxy-1,1-dimethylpyrrolidinium-2-carboxylate, (4S)-2-METHYL-2,4-PENTANEDIOL, IODIDE ION, ...
Authors:Vetting, M.W, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-09-12
Release date:2012-10-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of new enzymes and metabolic pathways by using structure and genome context.
Nature, 502, 2013
1XMQ
DownloadVisualize
BU of 1xmq by Molmil
Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center
Descriptor: 16s ribosomal RNA, 30S Ribosomal Protein S10, 30S Ribosomal Protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
7MQA
DownloadVisualize
BU of 7mqa by Molmil
Cryo-EM structure of the human SSU processome, state post-A1
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
4IL6
DownloadVisualize
BU of 4il6 by Molmil
Structure of Sr-substituted photosystem II
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Koua, F.H.M, Umena, Y, Kawakami, K, Kamiya, N, Shen, J.R.
Deposit date:2012-12-29
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Sr-substituted photosystem II at 2.1 A resolution and its implications in the mechanism of water oxidation
Proc.Natl.Acad.Sci.USA, 110, 2013
7MQ9
DownloadVisualize
BU of 7mq9 by Molmil
Cryo-EM structure of the human SSU processome, state pre-A1*
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
7MQ8
DownloadVisualize
BU of 7mq8 by Molmil
Cryo-EM structure of the human SSU processome, state pre-A1
Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Vanden Broeck, A, Singh, S, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
4JI0
DownloadVisualize
BU of 4ji0 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, ZINC ION, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.492 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
2A06
DownloadVisualize
BU of 2a06 by Molmil
Bovine cytochrome bc1 complex with stigmatellin bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ...
Authors:Huang, L.S, Cobessi, D, Tung, E.Y, Berry, E.A.
Deposit date:2005-06-16
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern.
J.Mol.Biol., 351, 2005
7M78
DownloadVisualize
BU of 7m78 by Molmil
Room Temperature XFEL Crystallography reveals asymmetry in the vicinity of the two phylloquinones in Photosystem I
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Keable, S.M, Simon, P.S, Kolsch, A, Kern, J, Yachandra, V.K, Zouni, A, Yano, J.
Deposit date:2021-03-26
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Room temperature XFEL crystallography reveals asymmetry in the vicinity of the two phylloquinones in photosystem I.
Sci Rep, 11, 2021
7M75
DownloadVisualize
BU of 7m75 by Molmil
Room Temperature XFEL Crystallography reveals asymmetry in the vicinity of the two phylloquinones in Photosystem I
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Keable, S.M, Simon, P.S, Kolsch, A, Kern, J, Yachandra, V.K, Zouni, A, Yano, J.
Deposit date:2021-03-26
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Room temperature XFEL crystallography reveals asymmetry in the vicinity of the two phylloquinones in photosystem I.
Sci Rep, 11, 2021
7M76
DownloadVisualize
BU of 7m76 by Molmil
Room Temperature XFEL Crystallography reveals asymmetry in the vicinity of the two phylloquinones in Photosystem I
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Keable, S.M, Simon, P.S, Kolsch, A, Kern, J, Yachandra, V.K, Zouni, A, Yano, J.
Deposit date:2021-03-26
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Room temperature XFEL crystallography reveals asymmetry in the vicinity of the two phylloquinones in photosystem I.
Sci Rep, 11, 2021
4K3N
DownloadVisualize
BU of 4k3n by Molmil
Phosphonic Arginine Mimetics as Inhibitors of the M17 Aminopeptidases from Plasmodium falciparum
Descriptor: CARBONATE ION, M17 leucyl aminopeptidase, NONAETHYLENE GLYCOL, ...
Authors:McGowan, S.
Deposit date:2013-04-11
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.
J.Med.Chem., 56, 2013
1YJ9
DownloadVisualize
BU of 1yj9 by Molmil
Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-13
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
1XNR
DownloadVisualize
BU of 1xnr by Molmil
Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
Descriptor: 16S Ribosomal RNA, 16S Ribosomal protein S10, 16S Ribosomal protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon