Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6O4X
DownloadVisualize
BU of 6o4x by Molmil
Binary complex of native hAChE with 9-aminoacridine
Descriptor: 9-AMINOACRIDINE, Acetylcholinesterase, GLYCEROL, ...
Authors:Gerlits, O, Kovalevsky, A, Radic, Z.
Deposit date:2019-03-01
Release date:2019-06-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A new crystal form of human acetylcholinesterase for exploratory room-temperature crystallography studies.
Chem.Biol.Interact., 309, 2019
6ONZ
DownloadVisualize
BU of 6onz by Molmil
Dehaloperoxidase B in complex with substtrate 4-nitro-cresol
Descriptor: 1,2-ETHANEDIOL, 2-methyl-4-nitrophenol, Dehaloperoxidase B, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2019-04-22
Release date:2019-09-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Arch.Biochem.Biophys., 673, 2019
8ASM
DownloadVisualize
BU of 8asm by Molmil
Cobalt(II) bound to a non-canonical quadruplex
Descriptor: COBALT (II) ION, COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3')
Authors:Lambert, M.C, Hall, J.P.
Deposit date:2022-08-19
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identifying metal-DNA binding sites, what is the best method to get transition metals into a crystal system?
To Be Published
5HZM
DownloadVisualize
BU of 5hzm by Molmil
Human HMT1 hnRNP methyltransferase-like protein 6 (S. cerevisiae)
Descriptor: Protein arginine N-methyltransferase 6, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN ATOM OR ION
Authors:DONG, A, ZENG, H, WALKER, J.R, Seitova, A, Hutchinson, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, MIN, J, WU, H, Structural Genomics Consortium (SGC)
Deposit date:2016-02-02
Release date:2016-02-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis of arginine asymmetrical dimethylation by PRMT6.
Biochem. J., 473, 2016
3NRC
DownloadVisualize
BU of 3nrc by Molmil
Crystal Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD+ and triclosan
Descriptor: Enoyl-[acyl-carrier-protein] reductase (NADH), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRICLOSAN
Authors:Mehboob, S, Santarsiero, B.D, Truong, K, Johnson, M.E.
Deposit date:2010-06-30
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structure of the Francisella tularensis enoyl-acyl carrier protein reductase (FabI) in complex with NAD(+) and triclosan.
Acta Crystallogr.,Sect.F, 66, 2010
6ONG
DownloadVisualize
BU of 6ong by Molmil
Dehaloperoxidate B in complex with substrate 4-F-cresol
Descriptor: 1,2-ETHANEDIOL, 4-fluoro-2-methylphenol, Dehaloperoxidase B, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T, McGuire, A.
Deposit date:2019-04-22
Release date:2019-09-11
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Arch.Biochem.Biophys., 673, 2019
6ONX
DownloadVisualize
BU of 6onx by Molmil
Dehaloperoxidase B in complex with substrate 4-Br-cresol
Descriptor: 1,2-ETHANEDIOL, 4-bromo-2-methylphenol, DI(HYDROXYETHYL)ETHER, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T.
Deposit date:2019-04-22
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants.
Arch.Biochem.Biophys., 673, 2019
1PS3
DownloadVisualize
BU of 1ps3 by Molmil
Golgi alpha-mannosidase II in complex with kifunensine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-mannosidase II, ...
Authors:Shah, N, Kuntz, D.A, Rose, D.R.
Deposit date:2003-06-20
Release date:2003-12-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparison of Kifunensine and 1-Deoxymannojirimycin Binding to Class I and II alpha-Mannosidases Demonstrates Different Saccharide Distortions in Inverting and Retaining Catalytic Mechanisms
Biochemistry, 42, 2003
6T60
DownloadVisualize
BU of 6t60 by Molmil
Crystal structure of Acinetobacter baumannii FabG at 1.66 A resolution
Descriptor: 3-oxoacyl-(Acyl-carrier-protein) reductase
Authors:Vella, P, Schnell, R, Schneider, G.
Deposit date:2019-10-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:A FabG inhibitor targeting an allosteric binding site inhibits several orthologs from Gram-negative ESKAPE pathogens.
Bioorg.Med.Chem., 30, 2020
8ASO
DownloadVisualize
BU of 8aso by Molmil
Nickel(II) bound to a non-canonical quadruplex
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3'), NICKEL (II) ION
Authors:Lambert, M.C, Hall, J.P.
Deposit date:2022-08-19
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Identifying metal-DNA binding sites, what is the best method to get transition metals into a crystal system?
To Be Published
5UMO
DownloadVisualize
BU of 5umo by Molmil
STRUCTURE OF EXTRACELLULAR SIGNAL-REGULATED KINASE
Descriptor: Mitogen-activated protein kinase 1, SULFATE ION
Authors:CHLEBOWICZ, J, ZHANG, F, GOLDSMITH, E.J.
Deposit date:2017-01-27
Release date:2017-03-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Atomic structure of the MAP kinase ERK2 at 2.3 A resolution.
Nature, 367, 1994
5J76
DownloadVisualize
BU of 5j76 by Molmil
Structure of Lectin from Colocasia esculenta(L.) Schott
Descriptor: 12kD storage protein, GLYCEROL
Authors:Vajravijayan, S, Pletnev, S, Nandhagopal, N, Gunasekaran, K.
Deposit date:2016-04-06
Release date:2016-06-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of beta-prism lectin from Colocasia esculenta (L.) S chott.
Int.J.Biol.Macromol., 91, 2016
7ZBF
DownloadVisualize
BU of 7zbf by Molmil
Crystal structure of native Iripin-4 serpin from tick Ixodes ricinus
Descriptor: Iripin-4 serpin, NICKEL (II) ION
Authors:Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
Deposit date:2022-03-23
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conformational transition of the Ixodes ricinus salivary serpin Iripin-4.
Acta Crystallogr D Struct Biol, 79, 2023
5J1D
DownloadVisualize
BU of 5j1d by Molmil
X-ray crystal structure of Phosphate binding protein (PBP) from Stenotrophomonas maltophilia
Descriptor: GLYCEROL, PHOSPHATE ION, Phosphate binding protein
Authors:Hatti, K, Gulati, A, Narayanswamy, S, Murthy, M.R.N.
Deposit date:2016-03-29
Release date:2016-10-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of crystal structures of proteins of unknown identity using a marathon molecular replacement procedure: structure of Stenotrophomonas maltophilia phosphate-binding protein.
Acta Crystallogr D Struct Biol, 72, 2016
5ZQV
DownloadVisualize
BU of 5zqv by Molmil
Crystal Structure of Protein Phosphate 1 complexed with PP1 binding domain of GM
Descriptor: CITRATE ANION, MANGANESE (II) ION, Protein phosphatase 1 regulatory subunit 3A, ...
Authors:Yu, J, Xiang, S.
Deposit date:2018-04-20
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for protein phosphatase 1 recruitment by glycogen-targeting subunits.
FEBS J., 285, 2018
9PFG
DownloadVisualize
BU of 9pfg by Molmil
Min22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a H3:SNAP-25 SN1), 4:2:2 alphaSNAP-syntaxin-1a H3-SNAP-25 SN1 subcomplex local refinement, non-hydrolyzing, class 28
Descriptor: Alpha-soluble NSF attachment protein, Synaptosomal-associated protein 25, Syntaxin-1A, ...
Authors:White, K.I, Brunger, A.T.
Deposit date:2025-07-04
Release date:2025-08-06
Last modified:2025-10-08
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structural remodeling of target-SNARE protein complexes by NSF enables synaptic transmission.
Nat Commun, 16, 2025
9PFF
DownloadVisualize
BU of 9pff by Molmil
Min22bin20S complex (NSF-alphaSNAP-2:2 syntaxin-1a H3:SNAP-25 SN1), non-hydrolyzing, class 27
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-soluble NSF attachment protein, ...
Authors:White, K.I, Brunger, A.T.
Deposit date:2025-07-04
Release date:2025-08-06
Last modified:2025-10-08
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural remodeling of target-SNARE protein complexes by NSF enables synaptic transmission.
Nat Commun, 16, 2025
8R8E
DownloadVisualize
BU of 8r8e by Molmil
DYRK1a in Complex with 2-Cyclopentyl-7-iodo-1H-indole-3-carbonitrile
Descriptor: 1,2-ETHANEDIOL, 2-cyclopentyl-7-iodanyl-1~{H}-indole-3-carbonitrile, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Stahlecker, J, Dammann, M, Stehle, T, Boeckler, F.M.
Deposit date:2023-11-29
Release date:2024-09-25
Last modified:2024-12-18
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Halogen Bonding on Water─A Drop in the Ocean?
J Chem Theory Comput, 20, 2024
6KFD
DownloadVisualize
BU of 6kfd by Molmil
Hydroxynitrile lyase from the millipede, Chamberlinius hualienensis, complexed with iodoacetate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hydroxynitrile lyase, iodoacetic acid
Authors:Motojima, F, Izumi, A, Asano, Y.
Deposit date:2019-07-07
Release date:2020-07-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:R-hydroxynitrile lyase from the cyanogenic millipede, Chamberlinius hualienensis-A new entry to the carrier protein family Lipocalines.
Febs J., 288, 2021
4ZQS
DownloadVisualize
BU of 4zqs by Molmil
New compact conformation of linear Ub2 structure
Descriptor: ubiquitin
Authors:Thach, T.T, Shin, D, Han, S, Lee, S.
Deposit date:2015-05-11
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:New conformations of linear polyubiquitin chains from crystallographic and solution-scattering studies expand the conformational space of polyubiquitin.
Acta Crystallogr D Struct Biol, 72, 2016
9GM4
DownloadVisualize
BU of 9gm4 by Molmil
Crystal structure of elastase LasB from Pseudomonas aeruginosa PA14 in complex with 6558
Descriptor: (2R)-2-(2-methylpropyl)-N-oxidanyl-N'-[(3R)-2-oxidanylidene-1-phenyl-pyrrolidin-3-yl]propanediamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Kolling, D, Koehnke, J.
Deposit date:2024-08-28
Release date:2025-09-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of elastase LasB from Pseudomonas aeruginosa PA14 in complex with 6558
To Be Published
6KFA
DownloadVisualize
BU of 6kfa by Molmil
Hydroxynitrile lyase from the millipede, Chamberlinius hualienensis bound with acetate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Hydroxynitrile lyase
Authors:Motojima, F, Izumi, A, Asano, Y.
Deposit date:2019-07-07
Release date:2020-07-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:R-hydroxynitrile lyase from the cyanogenic millipede, Chamberlinius hualienensis-A new entry to the carrier protein family Lipocalines.
Febs J., 288, 2021
6B90
DownloadVisualize
BU of 6b90 by Molmil
Multiconformer model of apo WT PTP1B with glycerol at 100 K (ALTERNATIVE REFINEMENT OF PDB 1SUG showing conformational heterogeneity)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Tyrosine-protein phosphatase non-receptor type 1
Authors:Keedy, D.A, Hill, Z.B, Biel, J.T, Kang, E, Rettenmaier, T.J, Brandao-Neto, J, von Delft, F, Wells, J.A, Fraser, J.S.
Deposit date:2017-10-09
Release date:2018-06-20
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering.
Elife, 7, 2018
6BJV
DownloadVisualize
BU of 6bjv by Molmil
CIRV p19 protein in complex with siRNA
Descriptor: RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3'), RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3'), RNA silencing suppressor p19
Authors:Foss, D.V, Schirle, N, Pezacki, J.P, Macrae, I.J.
Deposit date:2017-11-07
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Structural insights into interactions between viral suppressor of RNA silencing protein p19 mutants and small RNAs.
Febs Open Bio, 9, 2019
6BJG
DownloadVisualize
BU of 6bjg by Molmil
CIRV p19 mutant T111H in complex with siRNA
Descriptor: RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3'), RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3'), RNA silencing suppressor p19
Authors:Foss, D.V, Schirle, N, Pezacki, J.P, Macrae, I.J.
Deposit date:2017-11-06
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural insights into interactions between viral suppressor of RNA silencing protein p19 mutants and small RNAs.
Febs Open Bio, 9, 2019

242842

数据于2025-10-08公开中

PDB statisticsPDBj update infoContact PDBjnumon