PDB: 1459 resultsInfo pagesStatus searchChemie searchBIRD

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4OB5	Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10 Descriptor: 4E10 antibody germline precursor 7 heavy chain Fv, 4E10 antibody germline precursor 7 light chain Fv, GLYCEROL, ... Authors: Jaffe, J.B, Rupert, P.B. Deposit date: 2014-01-06 Release date: 2014-10-08 Last modified: 2024-11-27 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014
2F58	IGG1 FAB FRAGMENT (58.2) COMPLEX WITH 12-RESIDUE CYCLIC PEPTIDE (INCLUDING RESIDUES 315-324 OF HIV-1 GP120) (MN ISOLATE) Descriptor: 1-IMINO-5-PENTANONE, PROTEIN (HIV-1 GP120), PROTEIN (IGG1 FAB 58.2 ANTIBODY (HEAVY CHAIN)), ... Authors: Stanfield, R.L, Cabezas, E, Satterthwait, A.C, Stura, E.A, Profy, A.T, Wilson, I.A. Deposit date: 1998-10-23 Release date: 1999-02-09 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Dual conformations for the HIV-1 gp120 V3 loop in complexes with different neutralizing fabs. Structure Fold.Des., 7, 1999
2D7T	Crystal structure of human anti polyhydroxybutyrate antibody Fv Descriptor: anti polyhydroxybutyrate antibody Fv, heavy chain, light chain Authors: Watanabe, H. Deposit date: 2005-11-29 Release date: 2006-12-12 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: A human antibody fragment with high affinity for the biodegradable polymer film To be Published
2DKS	Solution structure of the first IG-like domain of human carcinoembryonic antigen related cell adhesion molecule 8 Descriptor: Carcinoembryonic antigen-related cell adhesion molecule 8 Authors: Nagashima, K, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-04-14 Release date: 2007-05-01 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the first IG-like domain of human carcinoembryonic antigen related cell adhesion molecule 8 To be Published
2DDQ	Crystal Structure of the Fab fragment of a R310 antibody complexed with (R)-HNE-histidine adduct Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-ACETYL-1-[(2R,3S,5R)-5-HYDROXY-2-PENTYLTETRAHYDROFURAN-3-YL]-L-HISTIDINE, R310 antibody heavy chain, ... Authors: Ito, S. Deposit date: 2006-02-02 Release date: 2006-07-11 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Bispecific abs against modified protein and DNA with oxidized lipids Proc.Natl.Acad.Sci.Usa, 103, 2006
2HP4	Computational design and crystal structure of an enhanced affinity mutant human CD8-alpha-alpha co-receptor Descriptor: GLYCEROL, SULFATE ION, T-cell surface glycoprotein CD8 alpha chain Authors: Rizkallah, P.J, Cole, D.K, Jakobsen, B.K, Boulter, J.M, Glick, M, Gao, G.F. Deposit date: 2006-07-17 Release date: 2007-02-06 Last modified: 2024-12-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Computational design and crystal structure of an enhanced affinity mutant human CD8 alphaalpha coreceptor Proteins, 67, 2007
2HRL	Siglec-7 in complex with GT1b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ETHYL-TRIMETHYL-SILANE, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-3)-[2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ... Authors: Attrill, H, Imamura, A, Sharma, R.S, Kiso, M, Crocker, P.R, van Aalten, D.M.F. Deposit date: 2006-07-20 Release date: 2006-08-15 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Siglec-7 Undergoes a Major Conformational Change When Complexed with the {alpha}(2,8)-Disialylganglioside GT1b J.Biol.Chem., 281, 2006
2DF3	The structure of Siglec-7 in complex with alpha(2,3)/alpha(2,6) disialyl lactotetraosyl 2-(trimethylsilyl)ethyl Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Attrill, H. Deposit date: 2006-02-23 Release date: 2006-06-20 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The structure of siglec-7 in complex with sialosides: leads for rational structure-based inhibitor design Biochem.J., 397, 2006
2DLF	HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI-DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 6.75 Descriptor: PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) (HEAVY CHAIN)), PROTEIN (ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S)-KAPPA (LIGHT CHAIN)), SULFATE ION Authors: Nakasako, M, Takahashi, H, Shimada, I, Arata, Y. Deposit date: 1998-12-17 Release date: 1999-12-17 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.55 Å) Cite: The pH-dependent structural variation of complementarity-determining region H3 in the crystal structures of the Fv fragment from an anti-dansyl monoclonal antibody. J.Mol.Biol., 291, 1999
2I27	Crystal Structure Analysis of the Nurse Shark New Antigen Receptor Ancestral variable domain Descriptor: New Antigen Receptor Ancestral Authors: Stanfield, R.L, Wilson, I.A. Deposit date: 2006-08-15 Release date: 2007-03-06 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.92 Å) Cite: Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding. J.Mol.Biol., 367, 2007
2I24	Crystal structure analysis of the nurse shark New Antigen Receptor PBLA8 variable domain Descriptor: CHLORIDE ION, New Antigen Receptor PBLA8 Authors: Stanfield, R.L, Wilson, I.A. Deposit date: 2006-08-15 Release date: 2007-03-06 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Maturation of Shark Single-domain (IgNAR) Antibodies: Evidence for Induced-fit Binding J.Mol.Biol., 367, 2007
1MAK	SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN Descriptor: IGG2A-KAPPA 26-10 FV (LIGHT CHAIN) Authors: Constantine, K.L, Friedrichs, M.S, Metzler, W.J, Wittekind, M, Hensley, P, Mueller, L. Deposit date: 1993-09-16 Release date: 1994-01-31 Last modified: 2024-10-23 Method: SOLUTION NMR Cite: Solution structure of an isolated antibody VL domain. J.Mol.Biol., 236, 1994
1MVU	SINGLE CHAIN FV OF C219 HEAVY CHAIN V101L MUTANT IN COMPLEX WITH SYNTHETIC EPITOPE PEPTIDE Descriptor: Ig VDJ-region (HEAVY CHAIN), Ig kappa-chain VJ-region (Light chain), P-GLYCOPROTEIN, ... Authors: Chan, D.C.M, Kuntz, D.A, Rose, D.R. Deposit date: 2002-09-26 Release date: 2003-10-07 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Single Chain C219 V(101H)L Mutant Antibody Complexed with a Helical Peptide To be Published
1N4X	Structure of scFv 1696 at acidic pH Descriptor: CHLORIDE ION, immunoglobulin heavy chain variable region, immunoglobulin kappa chain variable region Authors: Lescar, J, Brynda, J, Fabry, M, Horejsi, M, Rezacova, P, Sedlacek, J, Bentley, G.A. Deposit date: 2002-11-02 Release date: 2003-06-10 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structure of a single-chain Fv fragment of an antibody that inhibits the HIV-1 and HIV-2 proteases. Acta Crystallogr.,Sect.D, 59, 2003
1NCN	the receptor-binding domain of human B7-2 Descriptor: T lymphocyte activation antigen CD86 Authors: Zhang, X, Schwartz, J.D, Almo, S.C, Nathenson, S.G. Deposit date: 2002-12-05 Release date: 2003-03-11 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal Structure of the Receptor-Binding Domain of Human B7-2: Insights into Organization and Signaling Proc.Natl.Acad.Sci.USA, 100, 2003
1NKO	Energetic and structural basis of sialylated oligosaccharide recognition by the natural killer cell inhibitory receptor p75/AIRM1 or Siglec-7 Descriptor: Sialic acid binding Ig-like lectin 7 Authors: Dimasi, N, Attril, H, van Aalten, D.M.F, Moretta, L, Biassoni, R, Mariuzza, R.A. Deposit date: 2003-01-03 Release date: 2003-04-01 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Structure of the saccharide-binding domain of the human natural killer cell inhibitory receptor p75/AIRM1. Acta Crystallogr.,Sect.D, 60, 2004
1NEU	STRUCTURE OF MYELIN MEMBRANE ADHESION MOLECULE P0 Descriptor: MYELIN P0 PROTEIN Authors: Shapiro, L, Doyle, J.P, Hensley, P, Colman, D.R, Hendrickson, W.A. Deposit date: 1996-09-24 Release date: 1997-05-15 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the extracellular domain from P0, the major structural protein of peripheral nerve myelin. Neuron, 17, 1996
1NGW	Chimeric Affinity Matured Fab 7g12 complexed with mesoporphyrin Descriptor: Mature Metal Chelatase Catalytic Antibody, Heavy chain, Light chain, ... Authors: Yin, J, Andryski, S.E, Beuscher IV, A.E, Stevens, R.C, Schultz, P.G. Deposit date: 2002-12-18 Release date: 2003-02-04 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural evidence for substrate strain in antibody catalysis Proc.Natl.Acad.Sci.USA, 100, 2003
1OD9	N-terminal of Sialoadhesin in complex with Me-a-9-N-benzoyl-amino-9-deoxy-Neu5Ac (BENZ compound) Descriptor: SIALOADHESIN, SULFATE ION, methyl 5-acetamido-3,5,9-trideoxy-9-[(phenylcarbonyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid Authors: Zaccai, N.R, Maenaka, K, Maenaka, T, Crocker, P.R, Brossmer, R, Kelm, S, Jones, E.Y. Deposit date: 2003-02-14 Release date: 2003-05-16 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure-Guided Design of Sialic Acid-Based Siglec Inhibitors and Crystallographic Analysis in Complex with Sialoadhesin Structure, 11, 2003
1NPU	CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF MURINE PD-1 Descriptor: Programmed cell death protein 1 Authors: Zhang, X, Schwartz, J.-C.D, Guo, X, Cao, E, Chen, L, Zhang, Z.-Y, Nathenson, S.G, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2003-01-20 Release date: 2004-03-23 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and functional analysis of the costimulatory receptor programmed death-1. Immunity, 20, 2004
1O7V	High resolution structure of Siglec-7 Descriptor: SIALIC ACID BINDING IG-LIKE LECTIN 7, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Alphey, M.S, Attrill, H, Crocker, P.R, Van Aalten, D.M.F. Deposit date: 2002-11-14 Release date: 2003-03-30 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: High resolution crystal structures of Siglec-7. Insights into ligand specificity in the Siglec family. J.Biol.Chem., 278, 2003
1OAX	Fv Structure of the IgE SPE-7 in complex with acenaphthenequinone Descriptor: ACENAPHTHENEQUINONE, IMMUNOGLOBULIN E Authors: James, L.C, Roversi, P, Tawfik, D. Deposit date: 2003-01-21 Release date: 2004-01-15 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.67 Å) Cite: Antibody Multispecificity Mediated by Conformational Diversity Science, 299, 2003
1ODA	N-terminal of Sialoadhesin in complex with Me-a-9-N-(biphenyl-4-carbonyl)-amino-9-deoxy-Neu5Ac (BIP compound) Descriptor: ME-A-9-N-(BIPHENYL-4-CARBONYL)-AMINO-9-DEOXY-NEU5AC, SIALOADHESIN Authors: Zaccai, N.R, Maenaka, K, Maenaka, T, Crocker, P.R, Brossmer, R, Kelm, S, Jones, E.Y. Deposit date: 2003-02-14 Release date: 2003-08-14 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (3.31 Å) Cite: Structure Guided Design of Sialic Acid-Based Siglec Inhibitors and Crystallographic Analysis in Complex with Sialoadhesin Structure, 11, 2003
1O7S	High resolution structure of Siglec-7 Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, ... Authors: Alphey, M.S, Attrill, H, Crocker, P.R, Van Aalten, D.M.F. Deposit date: 2002-11-12 Release date: 2003-03-30 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.75 Å) Cite: High Resolution Structures of Siglec-7 - Insights Into Ligand Specificity in the Siglec Family J.Biol.Chem., 278, 2003
1OCW	Free conformation Ab2 of the IgE SPE-7 Descriptor: IMMUNOGLOBULIN E Authors: James, L.C, Roversi, P, Tawfik, D. Deposit date: 2003-02-11 Release date: 2004-02-05 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Antibody Multispecificity Mediated by Conformational Diversity Science, 299, 2003

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