Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8V76
DownloadVisualize
BU of 8v76 by Molmil
Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 12
Descriptor: Inositol polyphosphate multikinase, N-{(3P)-3-[(5P)-5-(2H-tetrazol-5-yl)-2,1-benzoxazol-3-yl]phenyl}cyclopentanecarboxamide, SULFATE ION
Authors:Wang, H, Shears, S.B.
Deposit date:2023-12-04
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based development of IPMK kinase inhibitors.
To Be Published
8V6Z
DownloadVisualize
BU of 8v6z by Molmil
Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 4
Descriptor: (5P)-3-(3,5-dimethylphenyl)-5-(1H-tetrazol-5-yl)-2,1-benzoxazole, Inositol polyphosphate multikinase
Authors:Wang, H, Shears, S.B.
Deposit date:2023-12-04
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-based development of IPMK kinase inhibitors.
To Be Published
8EKN
DownloadVisualize
BU of 8ekn by Molmil
Co-crystal structure of Chaetomium glucosidase with compound 15
Descriptor: (2R,3R,4R,5S)-2-(hydroxymethyl)-1-{[4-({[(5P)-3-methyl-5-(pyridazin-3-yl)phenyl]amino}methyl)phenyl]methyl}piperidine-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chaetomium alpha glucosidase, ...
Authors:Karade, S.S, Mariuzza, R.A.
Deposit date:2022-09-21
Release date:2023-02-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure-Based Design of Potent Iminosugar Inhibitors of Endoplasmic Reticulum alpha-Glucosidase I with Anti-SARS-CoV-2 Activity.
J.Med.Chem., 66, 2023
9QRS
DownloadVisualize
BU of 9qrs by Molmil
Crystal structure of CERK6 extracellular domain
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cheng, J.X.J, Gysel, K, Stougaard, J, Andersen, K.R.
Deposit date:2025-04-04
Release date:2025-07-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for size-selective perception of chitin in plants
To Be Published
8UFW
DownloadVisualize
BU of 8ufw by Molmil
CA9 mimic with SLC compound
Descriptor: 4-{[4-(trifluoromethyl)phenyl]carbamamido}benzene-1-sulfonamide, CHLORIDE ION, Carbonic anhydrase 2, ...
Authors:Peat, T.S.
Deposit date:2023-10-04
Release date:2024-12-18
Last modified:2025-09-17
Method:X-RAY DIFFRACTION (1.215 Å)
Cite:An ureido-substituted benzenesulfonamide carbonic anhydrase inhibitor exerts a potent antitumor effect in vitro and in vivo.
Exp Hematol Oncol, 14, 2025
9FHD
DownloadVisualize
BU of 9fhd by Molmil
hKHK-C in fomplex with BI-9787
Descriptor: (2~{S})-3-[3-[[4-[bis(fluoranyl)methyl]-3-cyano-6-[(3~{S})-3-(dimethylamino)pyrrolidin-1-yl]pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]-2-methyl-propanoic acid, Ketohexokinase, SULFATE ION
Authors:Ebenhoch, R, Pautsch, A.
Deposit date:2024-05-27
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.845 Å)
Cite:Discovery of BI-9787, a potent zwitterionic ketohexokinase inhibitor with oral bioavailability.
Bioorg.Med.Chem.Lett., 112, 2024
8CFK
DownloadVisualize
BU of 8cfk by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment E06
Descriptor: (3-endo)-8-benzyl-8-azabicyclo[3.2.1]octan-3-ol, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry E06
To be published
8CFM
DownloadVisualize
BU of 8cfm by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with F2X-Entry library fragment E08
Descriptor: 5-(2-methoxyethyl)-1,3,4-oxadiazol-2-amine, ADENINE, Adenosylhomocysteinase, ...
Authors:Malecki, P.H, Gawel, M, Stepniewska, M, Brzezinski, K.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from P. aeruginosa in complex with fragment F2X-Entry E08
To be published
1EKH
DownloadVisualize
BU of 1ekh by Molmil
NMR STRUCTURE OF D(TTGGCCAA)2 BOUND TO CHROMOMYCIN-A3 AND COBALT
Descriptor: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-4-O-acetyl-2,6-dideoxy-beta-D-galactopyranose, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-beta-D-Olivopyranose-(1-3)-beta-D-Olivopyranose, ...
Authors:Gochin, M.
Deposit date:2000-03-08
Release date:2000-03-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A high-resolution structure of a DNA-chromomycin-Co(II) complex determined from pseudocontact shifts in nuclear magnetic resonance.
Structure Fold.Des., 8, 2000
6FJN
DownloadVisualize
BU of 6fjn by Molmil
Adenovirus species 26 knob protein, 0.97A
Descriptor: 1,2-ETHANEDIOL, Fiber
Authors:Rizkallah, P.J, Parker, A.L, Baker, A.T.
Deposit date:2018-01-22
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Diversity within the adenovirus fiber knob hypervariable loops influences primary receptor interactions.
Nat Commun, 10, 2019
9O2T
DownloadVisualize
BU of 9o2t by Molmil
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 3 (3 Fabs bound)
Descriptor: 007 Fab Heavy Chain, 007 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:DeLaitsch, A.T, Bjorkman, P.J.
Deposit date:2025-04-04
Release date:2025-10-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Identification of a broad and potent V3 glycan site bNAb targeting an N332 gp120 glycan-independent epitope.
Biorxiv, 2025
6V0U
DownloadVisualize
BU of 6v0u by Molmil
Crystal structure of the first bromodomain (BD1) of human BRD4 bound to bromosporine
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, Bromosporine
Authors:Chan, A, Karim, M.R, Schonbrunn, E.
Deposit date:2019-11-19
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains.
J.Med.Chem., 63, 2020
7PZX
DownloadVisualize
BU of 7pzx by Molmil
LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Descriptor: (2S,4S)-N-((3R,5R)-1-(cyclopropanecarbonyl)-5-((4-((4-((S)-2-hydroxy-1-methoxyethyl)phenyl)ethynyl)benzamido)methyl)pyrrolidin-3-yl)-4-fluoropyrrolidine-2-carboxamide, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
Authors:Ryan, M.D, Pallin, T.D, Lamers, M.B.A.C, Leonard, P.M.
Deposit date:2021-10-13
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
To Be Published
8V5H
DownloadVisualize
BU of 8v5h by Molmil
Crystal structure of MASTL Kinase domain in complex with an inhibitor
Descriptor: (3M)-N~6~-ethyl-3-(1-methyl-1H-imidazol-5-yl)-2,7-naphthyridine-1,6-diamine, Serine/threonine-protein kinase greatwall
Authors:Greasley, S.E, Diehl, W.
Deposit date:2023-11-30
Release date:2025-01-22
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Discovery of Highly Selective Inhibitors of Microtubule-Associated Serine/Threonine Kinase-like (MASTL).
J.Med.Chem., 67, 2024
6FKO
DownloadVisualize
BU of 6fko by Molmil
Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, hadacidin at 2.1 Angstrom resolution
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase, ...
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-24
Release date:2019-06-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, HAdacidin at 2.1 Angstrom resolution
To Be Published
8DRE
DownloadVisualize
BU of 8dre by Molmil
LRRC8A:C conformation 2 (oblong)
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562, Volume-regulated anion channel subunit LRRC8C
Authors:Kern, D.M, Brohawn, S.G.
Deposit date:2022-07-20
Release date:2023-03-08
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural basis for assembly and lipid-mediated gating of LRRC8A:C volume-regulated anion channels.
Nat.Struct.Mol.Biol., 30, 2023
6MLS
DownloadVisualize
BU of 6mls by Molmil
Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from L-tyrosine
Descriptor: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, POTASSIUM ION, ...
Authors:Phillips, R.S.
Deposit date:2018-09-27
Release date:2019-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Pressure and Temperature Effects on the Formation of Aminoacrylate Intermediates of Tyrosine Phenol-lyase Demonstrate Reaction Dynamics
Acs Catalysis, 10, 2020
8CVR
DownloadVisualize
BU of 8cvr by Molmil
Human 20S proteasome with MG-132
Descriptor: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
Authors:Zhao, J.
Deposit date:2022-05-18
Release date:2022-11-02
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7PRC
DownloadVisualize
BU of 7prc by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (DG-420315 (TRIAZINE) COMPLEX)
Descriptor: 15-cis-1,2-dihydroneurosporene, 2-CHLORO-4-ETHYLAMINO-6-(R(+)-2'-CYANO-4-BUTYLAMINO)-1,3,5-TRIAZINE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D, Michel, H.
Deposit date:1997-08-01
Release date:1999-04-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid.
J.Mol.Biol., 286, 1999
6V6V
DownloadVisualize
BU of 6v6v by Molmil
Crystal structure of oncogenic RhoA mutant G14V complexed with GDP
Descriptor: 1,4-DIETHYLENE DIOXIDE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lin, Y, Zheng, Y.
Deposit date:2019-12-06
Release date:2020-12-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of an inactive conformation of GTP-bound RhoA GTPase.
Structure, 29, 2021
8VDB
DownloadVisualize
BU of 8vdb by Molmil
Crystal structure of Bacillus subtilis FabHB, beta-ketoacyl carrier protein synthase III
Descriptor: Beta-ketoacyl-[acyl-carrier-protein] synthase III 2, GLYCEROL
Authors:Radka, C.D, Rock, C.O.
Deposit date:2023-12-14
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the fatty acid biosynthesis initiation enzymes in Bacillus subtilis.
J.Struct.Biol., 216, 2024
6V51
DownloadVisualize
BU of 6v51 by Molmil
Spin-labeled T4 Lysozyme (9/131FnbY)-(4-Amino-TEMPO)
Descriptor: 4-amino-2,2,6,6-tetramethylpiperidin-1-ol, Endolysin
Authors:Liu, J, Morizumi, T, Ou, W.L, Wang, L, Ernst, O.P.
Deposit date:2019-12-02
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Genetically Encoded Quinone Methides Enabling Rapid, Site-Specific, and Photocontrolled Protein Modification with Amine Reagents.
J.Am.Chem.Soc., 142, 2020
8VTS
DownloadVisualize
BU of 8vts by Molmil
Meis1 homeobox domain bound to paromomycin fragment
Descriptor: 1,2-ETHANEDIOL, Homeobox protein Meis1, ISOPROPYL ALCOHOL, ...
Authors:Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N.
Deposit date:2024-01-27
Release date:2024-02-14
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
6VBQ
DownloadVisualize
BU of 6vbq by Molmil
Crystal structure of anti-HIV-1 antibody DH822 bound to gp120 V2 peptide
Descriptor: DH822 heavy chain, DH822 light chain, Envelope glycoprotein gp160
Authors:Janus, B.M, Ofek, G.
Deposit date:2019-12-19
Release date:2020-02-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.116 Å)
Cite:HIV vaccine delayed boosting increases Env variable region 2-specific antibody effector functions.
JCI Insight, 5, 2020
8E3S
DownloadVisualize
BU of 8e3s by Molmil
CryoEM structure of yeast Arginyltransferase 1 (ATE1)
Descriptor: Arginyl-tRNA--protein transferase 1, ZINC ION
Authors:Huang, W, Zhang, Y, Taylor, D.J.
Deposit date:2022-08-17
Release date:2023-04-26
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structural basis of tRNA recognition by arginyl-tRNA-protein transferase.
Nat Commun, 14, 2023

244349

数据于2025-11-05公开中

PDB statisticsPDBj update infoContact PDBjnumon