Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MC2
DownloadVisualize
BU of 5mc2 by Molmil
Crystal Structure of Gly278Asp mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: GLYCEROL, GLYCINE, MANGANESE (II) ION, ...
Authors:Wilk, P, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5MC0
DownloadVisualize
BU of 5mc0 by Molmil
Crystal Structure of delTyr231 mutant of Human Prolidase with Mn ions and GlyPro ligand
Descriptor: CHLORIDE ION, GLYCEROL, GLYCINE, ...
Authors:Wilk, P, Mueller, U, Dobbek, H, Weiss, M.S.
Deposit date:2016-11-09
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural basis for prolidase deficiency disease mechanisms.
FEBS J., 285, 2018
5JUI
DownloadVisualize
BU of 5jui by Molmil
domain-swapped dimer of the the KRT10-binding region (BR) of PsrP
Descriptor: Cell wall surface anchor family protein, GLYCEROL, SODIUM ION
Authors:Schulte, T, Mikaelsson, C, Achour, A.
Deposit date:2016-05-10
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The BR domain of PsrP interacts with extracellular DNA to promote bacterial aggregation; structural insights into pneumococcal biofilm formation.
Sci Rep, 6, 2016
7D5B
DownloadVisualize
BU of 7d5b by Molmil
BACE2 xaperone complex with N-{3-[(5R)-3-amino-2,5-dimethyl-1,1-dioxo-5,6-dihydro-2H-1lambda6,2,4-thiadiazin-5-yl]-4-fluorophenyl}-5-fluoropyridine-2-carboxamide
Descriptor: 1,2-ETHANEDIOL, Beta-secretase 2, CHLORIDE ION, ...
Authors:Fujimoto, K, Yoshida, S, Tadano, G, Asada, N, Fuchino, K, Suzuki, S, Matsuoka, E, Yamamoto, T, Yamamoto, S, Ando, S, Kanegawa, N, Tonomura, Y, Ito, H, Moechars, D, Rombouts, F.J.R, Gijsen, H.J.M, Kusakabe, K.I.
Deposit date:2020-09-25
Release date:2021-03-31
Last modified:2021-04-07
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure-Based Approaches to Improving Selectivity through Utilizing Explicit Water Molecules: Discovery of Selective beta-Secretase (BACE1) Inhibitors over BACE2.
J.Med.Chem., 64, 2021
5MLR
DownloadVisualize
BU of 5mlr by Molmil
Plantago Major multifunctional oxidoreductase V150M mutant in complex with citral and NADP+
Descriptor: CHLORIDE ION, Geranaldehyde, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Fellows, R, Russo, C.M, Lee, S.G, Jez, J.M, Chisholm, J.D, Zubieta, C, Nanao, M.
Deposit date:2016-12-07
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:A multisubstrate reductase from Plantago major: structure-function in the short chain reductase superfamily.
Sci Rep, 8, 2018
4Q4I
DownloadVisualize
BU of 4q4i by Molmil
Crystal structure of E.coli aminopeptidase N in complex with amastatin
Descriptor: Amastatin, Aminopeptidase N, GLYCEROL, ...
Authors:Reddi, R, Ganji, R.J, Addlagatta, A.
Deposit date:2014-04-14
Release date:2015-04-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for the inhibition of M1 family aminopeptidases by the natural product actinonin: Crystal structure in complex with E. coli aminopeptidase N.
Protein Sci., 24, 2015
4Q69
DownloadVisualize
BU of 4q69 by Molmil
Crystal structure of a SusD homolog (BT2259) from Bacteroides thetaiotaomicron VPI-5482 at 2.50 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Putative lipoprotein, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-04-21
Release date:2014-06-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a SusD homolog (BT2259) from Bacteroides thetaiotaomicron VPI-5482 at 2.50 A resolution
To be published
5LD8
DownloadVisualize
BU of 5ld8 by Molmil
GSK3011724A cocrystallised with Mycobacterium tuberculosis H37Rv KasA
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 1, SODIUM ION, TETRAETHYLENE GLYCOL, ...
Authors:Chung, C.W, Neu, M.
Deposit date:2016-06-23
Release date:2016-09-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Identification of KasA as the cellular target of an anti-tubercular scaffold.
Nat Commun, 7, 2016
7EEB
DownloadVisualize
BU of 7eeb by Molmil
Structure of the CatSpermasome
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wu, J.P, Ke, M.
Deposit date:2021-03-18
Release date:2021-07-28
Last modified:2021-08-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of a mammalian sperm cation channel complex.
Nature, 595, 2021
5EOU
DownloadVisualize
BU of 5eou by Molmil
Pseudomonas aeruginosa PilM:PilN1-12 bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:McCallum, M, Tammam, S, Robinson, H, Shah, M, Calmettes, C, Moraes, T, Burrows, L, Howell, L.P.
Deposit date:2015-11-10
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:PilN Binding Modulates the Structure and Binding Partners of the Pseudomonas aeruginosa Type IVa Pilus Protein PilM.
J.Biol.Chem., 291, 2016
5D5D
DownloadVisualize
BU of 5d5d by Molmil
In meso in situ serial X-ray crystallography structure of AlgE at 100 K
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
Authors:Ma, P, Huang, C.-Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M.
Deposit date:2015-08-10
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures.
Acta Crystallogr D Struct Biol, 72, 2016
5LQ7
DownloadVisualize
BU of 5lq7 by Molmil
Salmonella effector SpvD - G161 variant
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Przydacz, M, Grabe, G.J, Holden, D.W, Hare, S.A.
Deposit date:2016-08-16
Release date:2016-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Salmonella Effector SpvD Is a Cysteine Hydrolase with a Serovar-specific Polymorphism Influencing Catalytic Activity, Suppression of Immune Responses, and Bacterial Virulence.
J. Biol. Chem., 291, 2016
5OGH
DownloadVisualize
BU of 5ogh by Molmil
Structure of RNase A at high resolution (1.16 A) in complex with 3'-CMP and sulphate ions
Descriptor: CHLORIDE ION, CYTIDINE-3'-MONOPHOSPHATE, Ribonuclease pancreatic, ...
Authors:Blanco, J.A, Prats-Ejarque, G, Salazar, V.A, Moussaoui, M, Boix, E.
Deposit date:2017-07-13
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Characterization of an RNase with two catalytic centers. Human RNase6 catalytic and phosphate-binding site arrangement favors the endonuclease cleavage of polymeric substrates.
Biochim Biophys Acta Gen Subj, 1863, 2019
5DGE
DownloadVisualize
BU of 5dge by Molmil
Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M.
Deposit date:2015-08-27
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5CZG
DownloadVisualize
BU of 5czg by Molmil
Crystal Structure Analysis of hypothetical bromodomain Tb427.10.7420 from Trypanosoma brucei in complex with bromosporine
Descriptor: Bromosporine, Hypothetical Bromodomain, SODIUM ION, ...
Authors:Jiang, D.Q, Tempel, W, Loppnau, P, Graslund, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Amani, M, Hou, C.F.D, Structural Genomics Consortium (SGC)
Deposit date:2015-07-31
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Crystal Structure Analysis of hypothetical bromodomain from Trypanosoma brucei
to be published
5DGQ
DownloadVisualize
BU of 5dgq by Molmil
Crystal structure of GH9 exo-beta-D-glucosaminidase PBPRA0520
Descriptor: Putative endoglucanase-related protein, SODIUM ION
Authors:Suzuki, K, Honda, Y, Fushinobu, S.
Deposit date:2015-08-28
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of an inverting glycoside hydrolase family 9 exo-beta-D-glucosaminidase and the design of glycosynthase.
Biochem.J., 473, 2016
5EB8
DownloadVisualize
BU of 5eb8 by Molmil
Crystal structure of aromatic mutant (F4W) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Beta-xylanase, MAGNESIUM ION, SODIUM ION
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2015-10-18
Release date:2016-10-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of aromatic mutant (F4W) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
To Be Published
5DXD
DownloadVisualize
BU of 5dxd by Molmil
Crystal structure of Putative beta-glucanase (Rv0315 ortholog) from Mycobacterium abscessus
Descriptor: Putative beta-glucanase, SODIUM ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-09-23
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Putative beta-glucanase (Rv0315 ortholog) from Mycobacterium abcesus
to be published
5E56
DownloadVisualize
BU of 5e56 by Molmil
Crystal structure of mouse CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, SODIUM ION
Authors:Fedorov, A.A, Fedorov, E.V, SAMANTA, D, Bonanno, J.B, Almo, S.C.
Deposit date:2015-10-07
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Crystal structure of mouse CTLA-4
To Be Published
5J2D
DownloadVisualize
BU of 5j2d by Molmil
Ternary complex crystal structure of DNA polymerase Beta with C:C mismatch at the primer terminus
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA polymerase beta, ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2016-03-29
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J2B
DownloadVisualize
BU of 5j2b by Molmil
Ternary complex crystal structure of DNA polymerase Beta with A:C mismatch at the primer terminus
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA polymerase beta, ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2016-03-29
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5J2H
DownloadVisualize
BU of 5j2h by Molmil
Ternary complex crystal structure of DNA polymerase Beta with G:T mismatch at the primer terminus
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA polymerase beta, ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2016-03-29
Release date:2016-10-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism.
Structure, 24, 2016
5EUA
DownloadVisualize
BU of 5eua by Molmil
Crystal structure of extended-spectrum beta-lactamase BEL-1 in complex with Moxalactam
Descriptor: (2R)-2-[(1R)-1-{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}-1-methoxy-2-oxoethyl]-5-methylidene-5,6-dihydro-2H-1,3 -oxazine-4-carboxylic acid, Beta-lactamase, SODIUM ION
Authors:Pozzi, C, De Luca, F, Benvenuti, M, Docquier, J.D, Mangani, S.
Deposit date:2015-11-18
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Pseudomonas aeruginosa BEL-1 Extended-Spectrum beta-Lactamase and Its Complexes with Moxalactam and Imipenem.
Antimicrob.Agents Chemother., 60, 2016
5EV1
DownloadVisualize
BU of 5ev1 by Molmil
Structure I of Intact U2AF65 Recognizing a 3' Splice Site Signal
Descriptor: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(*UP*UP*U)-D(P*UP*UP*(BRU)P*U)-R(P*UP*U)-3'), SODIUM ION, ...
Authors:Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L.
Deposit date:2015-11-19
Release date:2016-02-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.037 Å)
Cite:An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal.
Nat Commun, 7, 2016
5OME
DownloadVisualize
BU of 5ome by Molmil
The cryofrozen atomic resolution X-ray crystal structure of the reduced form (Fe2+) perdeuterated Pyrococcus furiosus Rubredoxin in D2O (100K, 0.75 Angstrom resolution)
Descriptor: FE (III) ION, PHOSPHATE ION, Rubredoxin, ...
Authors:Cuypers, M.G, Mason, S.A, Mossou, E, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
Deposit date:2017-07-31
Release date:2018-09-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (0.747 Å)
Cite:The cryofrozen atomic resolution X-ray crystal structure of the reduced form (Fe2+) perdeuterated Pyrococcus furiosus Rubredoxin in D2O (100K, 0.75 Angstrom resolution)
To Be Published

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon