Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4IE0
DownloadVisualize
BU of 4ie0 by Molmil
Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with pyridine-2,4-dicarboxylate (2,4-PDCA)
Descriptor: Alpha-ketoglutarate-dependent dioxygenase FTO, GLYCEROL, PYRIDINE-2,4-DICARBOXYLIC ACID, ...
Authors:Aik, W.S, McDonough, M.A, Schofield, C.J.
Deposit date:2012-12-13
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural basis for inhibition of the fat mass and obesity associated protein (FTO)
J.Med.Chem., 56, 2013
4IE5
DownloadVisualize
BU of 4ie5 by Molmil
Crystal structure of the human fat mass and obesity associated protein (FTO) in complex with N-[(3-hydroxypyridin-2-yl)carbonyl]glycine (MD6)
Descriptor: Alpha-ketoglutarate-dependent dioxygenase FTO, GLYCEROL, N-[(3-hydroxypyridin-2-yl)carbonyl]glycine, ...
Authors:Aik, W.S, McDonough, M.A, Schofield, C.J.
Deposit date:2012-12-13
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for inhibition of the fat mass and obesity associated protein (FTO)
J.Med.Chem., 56, 2013
4NG2
DownloadVisualize
BU of 4ng2 by Molmil
Crystal structure of LasR LBD-QslA complex from Pseudomonas aeruginosa
Descriptor: N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE, Transcriptional activator protein LasR, Uncharacterized protein
Authors:Fan, H, Wu, D.H, Song, H.
Deposit date:2013-11-01
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.413 Å)
Cite:QsIA disrupts LasR dimerization in antiactivation of bacterial quorum sensing
Proc.Natl.Acad.Sci.USA, 110, 2013
4NNJ
DownloadVisualize
BU of 4nnj by Molmil
Crystal structure of Uba1 in complex with ubiquitin-AMP and thioesterified ubiquitin
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, SULFATE ION, ...
Authors:Schaefer, A, Schindelin, H.
Deposit date:2013-11-18
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the ubiquitin-activating enzyme loaded with two ubiquitin molecules.
Acta Crystallogr.,Sect.D, 70, 2014
3CU8
DownloadVisualize
BU of 3cu8 by Molmil
Impaired binding of 14-3-3 to Raf1 is linked to Noonan and LEOPARD syndrome
Descriptor: 14-3-3 protein zeta/delta, MAGNESIUM ION, PROPANOIC ACID, ...
Authors:Schumacher, B, Weyand, M, Kuhlmann, J, Ottmann, C.
Deposit date:2008-04-16
Release date:2009-05-05
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Impaired binding of 14-3-3 to C-RAF in Noonan syndrome suggests new approaches in diseases with increased Ras signaling.
Mol. Cell. Biol., 30, 2010
4NWK
DownloadVisualize
BU of 4nwk by Molmil
Crystal structure of hepatis c virus protease (ns3) complexed with bms-605339 aka n-(tert-butoxycarbonyl)-3-me thyl-l-valyl-(4r)-n-((1r,2s)-1-((cyclopropylsulfonyl)carba moyl)-2-vinylcyclopropyl)-4-((6-methoxy-1-isoquinolinyl)ox y)-l-prolinamide
Descriptor: GLYCEROL, HCV NS3 1a Protease, N-(tert-butoxycarbonyl)-3-methyl-L-valyl-(4R)-N-{(1R,2S)-1-[(cyclopropylsulfonyl)carbamoyl]-2-ethenylcyclopropyl}-4-[(6-methoxyisoquinolin-1-yl)oxy]-L-prolinamide, ...
Authors:Muckelbauer, J.K, Klei, H.E.
Deposit date:2013-12-06
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Discovery and Early Clinical Evaluation of BMS-605339, a Potent and Orally Efficacious Tripeptidic Acylsulfonamide NS3 Protease Inhibitor for the Treatment of Hepatitis C Virus Infection.
J.Med.Chem., 57, 2014
4H0G
DownloadVisualize
BU of 4h0g by Molmil
Crystal structure of mimicry-recognizing native 2D10 scFv
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2D10 scFv
Authors:Tapryal, S, Gaur, V, Kaur, K.J, Salunke, D.M.
Deposit date:2012-09-08
Release date:2013-06-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural evaluation of a mimicry-recognizing paratope: plasticity in antigen-antibody interactions manifests in molecular mimicry.
J.Immunol., 191, 2013
2JHE
DownloadVisualize
BU of 2jhe by Molmil
N-terminal domain of TyrR transcription factor (residues 1 - 190)
Descriptor: 2-(2-ETHOXYETHOXY)ETHANOL, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Verger, D, Carr, P.D, Kwok, T, Ollis, D.L.
Deposit date:2007-02-21
Release date:2008-06-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the N-Terminal Domain of the Tyrr Transcription Factor Responsible for Gene Regulation of Aromatic Amino Acid Biosynthesis and Transport in Escherichia Coli K12
J.Mol.Biol., 367, 2007
4P3S
DownloadVisualize
BU of 4p3s by Molmil
Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticin
Descriptor: 5'-R(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3', GENETICIN
Authors:Kondo, J, Koganei, M.
Deposit date:2014-03-10
Release date:2016-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the bacterial A1408C-mutant ribosomal decoding site in complex with geneticin
To Be Published
4P3T
DownloadVisualize
BU of 4p3t by Molmil
Crystal structure of the bacterial A1408C-mutant ribosomal decoding site
Descriptor: 5'-D(*UP*UP*GP*CP*GP*UP*CP*CP*CP*GP*(5BU)P*CP*GP*AP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'
Authors:Kondo, J, Koganei, M.
Deposit date:2014-03-10
Release date:2016-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the bacterial A1408C-mutant ribosomal decoding site
To Be Published
2JV0
DownloadVisualize
BU of 2jv0 by Molmil
SET domain of RIZ1 tumor suppressor (PRDM2)
Descriptor: PR domain zinc finger protein 2
Authors:Briknarova, K.
Deposit date:2007-09-10
Release date:2008-01-22
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Structural studies of the SET domain from RIZ1 tumor suppressor
Biochem.Biophys.Res.Commun., 366, 2008
3CJW
DownloadVisualize
BU of 3cjw by Molmil
Crystal structure of the human COUP-TFII ligand binding domain
Descriptor: COUP transcription factor 2
Authors:Kruse, S.W, Reynolds, R, Vonrhein, C, Xu, H.E.
Deposit date:2008-03-14
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Identification of COUP-TFII Orphan Nuclear Receptor as a Retinoic Acid-Activated Receptor.
Plos Biol., 6, 2008
3B44
DownloadVisualize
BU of 3b44 by Molmil
Crystal structure of GlpG W136A mutant
Descriptor: glpG, nonyl beta-D-glucopyranoside
Authors:Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
Deposit date:2007-10-23
Release date:2008-01-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
2JZX
DownloadVisualize
BU of 2jzx by Molmil
PCBP2 KH1-KH2 domains
Descriptor: Poly(rC)-binding protein 2
Authors:Du, Z, Fenn, S, Tjhen, R, James, T.
Deposit date:2008-01-21
Release date:2008-08-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the first and second KH domains of human poly-C binding protein-2 reveals insights into its regulatory mechanisms
To be Published
3B84
DownloadVisualize
BU of 3b84 by Molmil
Crystal structure of the human BTB domain of the Krueppel related Zinc Finger Protein 3 (HKR3)
Descriptor: 1,2-ETHANEDIOL, UNKNOWN ATOM OR ION, Zinc finger and BTB domain-containing protein 48
Authors:Filippakopoulos, P, Bullock, A, Cooper, C, Keates, T, Salah, E, Pilka, E, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2007-10-31
Release date:2007-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal Structure of the Human BTB domain of the Krueppel related Zinc Finger Protein 3 (HKR3).
To be Published
4PDQ
DownloadVisualize
BU of 4pdq by Molmil
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analog
Descriptor: (2S)-4-amino-N-{(1R,2S,3R,4R,5S)-5-amino-3-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy }-4-[(2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-galactopyranosyl)oxy]-2-hydroxycyclohexyl}-2-hydroxybutanamide, MAGNESIUM ION, RNA (5'-*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C-3')
Authors:Hanessian, S, Saavedra, O.M, Vilchis-Reyes, M.A, Maianti, J.P, Kanazawa, H, Dozzo, P, Feeney, L.A, Armstrong, E.S, Kondo, J.
Deposit date:2014-04-21
Release date:2015-01-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Synthesis, broad spectrum antibacterial activity, and X-ray co-crystal structure of the decoding bacterial ribosomal A-site with 4'-deoxy-4'-fluoro neomycin analogs
Chem Sci, 5, 2014
3BBL
DownloadVisualize
BU of 3bbl by Molmil
Crystal structure of a regulatory protein of LacI family from Chloroflexus aggregans
Descriptor: 1,2-ETHANEDIOL, Regulatory protein of LacI family
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-09
Release date:2007-11-27
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a regulatory protein of LacI family from the Chloroflexus aggregans.
To be Published
2UZ3
DownloadVisualize
BU of 2uz3 by Molmil
Crystal Structure of Thymidine Kinase with dTTP from U. urealyticum
Descriptor: MAGNESIUM ION, THYMIDINE KINASE, THYMIDINE-5'-TRIPHOSPHATE, ...
Authors:Welin, M, Kosinska, U, Mikkelsen, N.E, Carnrot, C, Zhu, C, Wang, L, Eriksson, S, Munch-Petersen, B, Eklund, H.
Deposit date:2007-04-24
Release date:2007-05-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Thymidine Kinase 1 of Human and Mycoplasmic Origin
Proc.Natl.Acad.Sci.USA, 101, 2004
3B7G
DownloadVisualize
BU of 3b7g by Molmil
Human DEAD-box RNA helicase DDX20, Conserved domain I (DEAD) in complex with AMPPNP (Adenosine-(Beta,gamma)-imidotriphosphate)
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ATP-dependent RNA helicase DDX20
Authors:Karlberg, T, Tresaugues, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-10-30
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
3B5R
DownloadVisualize
BU of 3b5r by Molmil
Crystal structure of the androgen receptor ligand binding domain in complex with SARM C-31
Descriptor: (2S)-3-(4-chloro-3-fluorophenoxy)-N-[4-cyano-3-(trifluoromethyl)phenyl]-2-hydroxy-2-methylpropanamide, Androgen receptor
Authors:Bohl, C.E, Miller, D.D, Dalton, J.T.
Deposit date:2007-10-26
Release date:2008-09-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of B-ring substitution pattern on binding mode of propionamide selective androgen receptor modulators
Bioorg.Med.Chem.Lett., 18, 2008
3DT3
DownloadVisualize
BU of 3dt3 by Molmil
Human Estrogen receptor alpha LBD with GW368
Descriptor: 5-(4-hydroxyphenoxy)-6-(3-hydroxyphenyl)-7-methylnaphthalen-2-ol, Estrogen receptor
Authors:Williams, S.P, Miller, A.B.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Synthesis of 3-alkyl naphthalenes as novel estrogen receptor ligands.
Bioorg.Med.Chem.Lett., 18, 2008
3EW8
DownloadVisualize
BU of 3ew8 by Molmil
Crystal Structure Analysis of human HDAC8 D101L variant
Descriptor: 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide, BETA-MERCAPTOETHANOL, GLYCEROL, ...
Authors:Dowling, D.P, Gantt, S.L, Gattis, S.G, Fierke, C.A, Christianson, D.W.
Deposit date:2008-10-14
Release date:2008-12-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors.
Biochemistry, 47, 2008
4IZA
DownloadVisualize
BU of 4iza by Molmil
Structure of Dually Phosphorylated ERK2 bound to the PEA-15 Death Effector Domain
Descriptor: Astrocytic phosphoprotein PEA-15, Mitogen-activated protein kinase 1
Authors:Mace, P.D, Robinson, H, Riedl, S.J.
Deposit date:2013-01-29
Release date:2013-04-10
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of ERK2 bound to PEA-15 reveals a mechanism for rapid release of activated MAPK.
Nat Commun, 4, 2013
3F0R
DownloadVisualize
BU of 3f0r by Molmil
Crystal Structure Analysis of Human HDAC8 complexed with trichostatin A in a new monoclinic crystal form
Descriptor: Histone deacetylase 8, POTASSIUM ION, TRICHOSTATIN A, ...
Authors:Dowling, D.P, Gantt, S.L, Gattis, S.G, Fierke, C.A, Christianson, D.W.
Deposit date:2008-10-25
Release date:2008-12-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors.
Biochemistry, 47, 2008
4EQH
DownloadVisualize
BU of 4eqh by Molmil
Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Trp-AMS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, Histidine triad nucleotide-binding protein 1
Authors:Wang, J, Fang, P, Guo, M.
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor.
J.Phys.Chem.B, 116, 2012

225158

数据于2024-09-18公开中

PDB statisticsPDBj update infoContact PDBjnumon