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2DEC	Crystal Structure of the PH0510 protein from Pyrococcus horikoshii OT3 Descriptor: 1,2-ETHANEDIOL, 325aa long hypothetical protein, SODIUM ION Authors: Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-10 Release date: 2006-08-10 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structure of the PH0510 protein from Pyrococcus horikoshii OT3 To be Published
2DEF	PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES Descriptor: NICKEL (II) ION, PEPTIDE DEFORMYLASE Authors: Meinnel, T, Dardel, F. Deposit date: 1997-12-15 Release date: 1998-03-18 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of nickel-peptide deformylase. J.Mol.Biol., 280, 1998
2DEG	Crystal structure of tt0972 protein form Thermus Thermophilus with Mn2(+) ions Descriptor: GLYCEROL, MANGANESE (II) ION, SODIUM ION, ... Authors: Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-10 Release date: 2007-05-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of tt0972 protein form Thermus Thermophilus To be Published
2DEH	Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions Descriptor: CHLORIDE ION, SODIUM ION, tt0972 protein Authors: Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-10 Release date: 2007-05-01 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Crystal structure of tt0972 protein form Thermus Thermophilus To be Published
2DEI	Crystal Structure of galaktokinase from Pyrococcus horikoshii with AMP-PNP and galactose Descriptor: MAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE, Probable galactokinase, alpha-D-galactopyranose Authors: Inagaki, E, Sakamoto, K, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-10 Release date: 2007-05-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structure of galaktokinase from Pyrococcus horikoshii To be Published
2DEJ	Crystal Structure of galaktokinase from Pyrococcus horikoshii with AMP-PN and galactose Descriptor: Probable galactokinase, alpha-D-galactopyranose, {5'-O-[(R)-{[(S)-AMINO(HYDROXY-KAPPAO)PHOSPHORYL]OXY}(HYDROXY-KAPPAO)PHOSPHORYL]ADENOSINATO(2-)}MAGNESIUM Authors: Inagaki, E, Sakamoto, K, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-10 Release date: 2007-05-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal Structure of galaktokinase from Pyrococcus horikoshii To be Published
2DEK	Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution Descriptor: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION Authors: Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-10 Release date: 2006-07-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3 at 1.65 A resolution To be Published
2DEM	Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA Descriptor: 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*AP*GP*CP*AP*AP*CP*A)-3', DIHYDROGENPHOSPHATE ION, ... Authors: Kosaka, H, Nakagawa, N, Masui, R, Hoseki, J, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-13 Release date: 2007-04-24 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of family 5 uracil-DNA glycosylase bound to DNA. J.Mol.Biol., 373, 2007
2DEN	Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex with Ubiquitin Descriptor: Immunoglobulin G-binding protein G,Ubiquitin-like protein 7, Polyubiquitin-B Authors: Hu, H.Y, Lin, D.H, Chang, Y.G. Deposit date: 2006-02-14 Release date: 2006-06-13 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of the ubiquitin-associated domain of human BMSC-UbP and its complex with ubiquitin Protein Sci., 15, 2006
2DEO	1510-N membrane protease specific for a stomatin homolog from Pyrococcus horikoshii Descriptor: 441aa long hypothetical nfeD protein Authors: Yokoyama, H, Matsui, I. Deposit date: 2006-02-16 Release date: 2006-05-16 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Molecular Structure of a Novel Membrane Protease Specific for a Stomatin Homolog from the Hyperthermophilic Archaeon Pyrococcus horikoshii J.Mol.Biol., 358, 2006
2DEP	Crystal Structure of xylanase B from Clostridium stercorarium F9 Descriptor: Thermostable celloxylanase Authors: Fushinobu, S, Nishimoto, M, Miyanaga, A, Kitaoka, M, Hayashi, K. Deposit date: 2006-02-16 Release date: 2007-01-16 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Molecular anatomy of the alkaliphilic xylanase from Bacillus halodurans C-125 To be Published
2DEQ	Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in complex with Biotinyl-5'-AMP, K111G mutation Descriptor: 235aa long hypothetical biotin--[acetyl-CoA-carboxylase] ligase, BIOTINYL-5-AMP Authors: Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-16 Release date: 2006-08-16 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Ligand Structures Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 To be Published
2DER	Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state Descriptor: PHOSPHATE ION, SULFATE ION, tRNA, ... Authors: Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. Deposit date: 2006-02-17 Release date: 2006-08-15 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Snapshots of tRNA sulphuration via an adenylated intermediate Nature, 442, 2006
2DES	INTERACTIONS BETWEEN MORPHOLINYL ANTHRACYCLINES AND DNA: THE CRYSTAL STRUCTURE OF A MORPHOLINO DOXORUBICIN BOUND TO D(CGTACG) Descriptor: 3'-DESAMINO-3'-(2-METHOXY-4-MORPHOLINYL)-DOXORUBICIN, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), MAGNESIUM ION, ... Authors: Cirilli, M, Bachechi, F, Ughetto, G, Colonna, F.P, Capobianco, M.L. Deposit date: 1993-03-16 Release date: 1993-07-15 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Interactions between morpholinyl anthracyclines and DNA. The crystal structure of a morpholino doxorubicin bound to d(CGTACG). J.Mol.Biol., 230, 1993
2DET	Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state Descriptor: SULFATE ION, tRNA, tRNA-specific 2-thiouridylase mnmA Authors: Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. Deposit date: 2006-02-17 Release date: 2006-08-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Snapshots of tRNA sulphuration via an adenylated intermediate Nature, 442, 2006
2DEU	Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the adenylated intermediate state Descriptor: ADENOSINE MONOPHOSPHATE, SULFATE ION, tRNA, ... Authors: Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O. Deposit date: 2006-02-17 Release date: 2006-08-15 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Snapshots of tRNA sulphuration via an adenylated intermediate Nature, 442, 2006
2DEV	Crystal structure of tt0972 protein from Thermus Thermophilus with Cs(+) ions Descriptor: CESIUM ION, CHLORIDE ION, SODIUM ION, ... Authors: Inagaki, E, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-02-17 Release date: 2007-05-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Crystal structure of tt0972 protein from Thermus Thermophilus To be Published
2DEW	Crystal structure of human peptidylarginine deiminase 4 in complex with histone H3 N-terminal tail including Arg8 Descriptor: 10-mer peptide from histone H3, CALCIUM ION, Protein-arginine deiminase type IV, ... Authors: Arita, K, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M. Deposit date: 2006-02-18 Release date: 2006-04-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4 Proc.Natl.Acad.Sci.Usa, 103, 2006
2DEX	Crystal structure of human peptidylarginine deiminase 4 in complex with histone H3 N-terminal peptide including Arg17 Descriptor: 10-mer peptide from histone H3, CALCIUM ION, Protein-arginine deiminase type IV, ... Authors: Arita, K, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M. Deposit date: 2006-02-18 Release date: 2006-04-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4 Proc.Natl.Acad.Sci.Usa, 103, 2006
2DEY	Crystal structure of human peptidylarginine deiminase 4 in complex with histone H4 N-terminal tail including Arg3 Descriptor: 10-mer peptide from histone H4, CALCIUM ION, Protein-arginine deiminase type IV, ... Authors: Arita, K, Shimizu, T, Hashimoto, H, Hidaka, Y, Yamada, M, Sato, M. Deposit date: 2006-02-18 Release date: 2006-04-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structural basis for histone N-terminal recognition by human peptidylarginine deiminase 4 Proc.Natl.Acad.Sci.Usa, 103, 2006
2DEZ	Structure of human PYY Descriptor: Peptide YY Authors: Nygaard, R. Deposit date: 2006-02-20 Release date: 2006-07-18 Last modified: 2022-03-09 Method: SOLUTION NMR Cite: The PP-Fold Solution Structure of Human Polypeptide YY and Human PYY3-36 As Determined by NMR(,) Biochemistry, 45, 2006
2DF0	Solution structure of human PYY3-36 Descriptor: Peptide YY Authors: Nygaard, R. Deposit date: 2006-02-20 Release date: 2006-07-18 Last modified: 2022-03-09 Method: SOLUTION NMR Cite: The PP-Fold Solution Structure of Human Polypeptide YY and Human PYY3-36 As Determined by NMR(,) Biochemistry, 45, 2006
2DF3	The structure of Siglec-7 in complex with alpha(2,3)/alpha(2,6) disialyl lactotetraosyl 2-(trimethylsilyl)ethyl Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Attrill, H. Deposit date: 2006-02-23 Release date: 2006-06-20 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The structure of siglec-7 in complex with sialosides: leads for rational structure-based inhibitor design Biochem.J., 397, 2006
2DF4	Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+ Descriptor: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit A, ... Authors: Nakamura, A, Yao, M, Tanaka, I. Deposit date: 2006-02-23 Release date: 2006-07-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Ammonia channel couples glutaminase with transamidase reactions in GatCAB Science, 312, 2006
2DF5	Crystal Structure of Pf-PCP(1-204)-C Descriptor: Pyrrolidone-carboxylate peptidase Authors: Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. Deposit date: 2006-02-24 Release date: 2007-03-06 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Conformational contagion in a protein: structural properties of a chameleon sequence Proteins, 68, 2007

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