Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5CKH
DownloadVisualize
BU of 5ckh by Molmil
E. coli MazF E24A form IIb
Descriptor: Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.449 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
6ESN
DownloadVisualize
BU of 6esn by Molmil
Ligand complex of RORg LBD
Descriptor: (2~{R})-2-acetamido-~{N}-[4-(5-cyano-3-fluoranyl-2-methoxy-phenyl)thiophen-2-yl]-2-(4-ethylsulfonylphenyl)ethanamide, LYS-HIS-LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN-ASP-SER, Nuclear receptor ROR-gamma, ...
Authors:Xue, Y, Aagaard, A, Narjes, F.
Deposit date:2017-10-23
Release date:2018-08-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Potent and Orally Bioavailable Inverse Agonists of ROR gamma t Resulting from Structure-Based Design.
J. Med. Chem., 61, 2018
7PP7
DownloadVisualize
BU of 7pp7 by Molmil
Thunberia alata 16:0-ACP desaturase
Descriptor: Acyl-[acyl-carrier-protein] 6-desaturase, FE (III) ION
Authors:Guy, J.E, Whittle, E, Cai, Y, Chai, J, Lindqvist, Y, Shanklin, J.
Deposit date:2021-09-13
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Regioselectivity mechanism of the Thunbergia alata Delta 6-16:0-acyl carrier protein desaturase.
Plant Physiol., 188, 2022
1YJN
DownloadVisualize
BU of 1yjn by Molmil
Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-14
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
1YJ9
DownloadVisualize
BU of 1yj9 by Molmil
Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-13
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
5CQX
DownloadVisualize
BU of 5cqx by Molmil
E. coli MazF mutant E24A in complex with MazE residues 68-82 form I
Descriptor: Antitoxin MazE, Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
1YM8
DownloadVisualize
BU of 1ym8 by Molmil
crystal structure of GZZ shows up puckering of the proline ring in the Xaa position.
Descriptor: collagen gly-4(R)hyp-4(R)hyp
Authors:Schumacher, M.A, Mizuno, K, Bachinger, H.P.
Deposit date:2005-01-20
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position.
J.Biol.Chem., 280, 2005
1YT3
DownloadVisualize
BU of 1yt3 by Molmil
Crystal Structure of Escherichia coli RNase D, an exoribonuclease involved in structured RNA processing
Descriptor: Ribonuclease D, SULFATE ION, ZINC ION
Authors:Zuo, Y, Wang, Y, Malhotra, A.
Deposit date:2005-02-09
Release date:2005-08-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Escherichia coli RNase D, an Exoribonuclease Involved in Structured RNA Processing
Structure, 13, 2005
5H1O
DownloadVisualize
BU of 5h1o by Molmil
CRISPR-associated protein
Descriptor: ACETATE ION, CRISPR-associated endoribonuclease Cas2
Authors:Ka, D, Jeong, U, Bae, E.
Deposit date:2016-10-11
Release date:2017-10-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and dynamic insights into the role of conformational switching in the nuclease activity of the Xanthomonas albilineans Cas2 in CRISPR-mediated adaptive immunity
Struct Dyn, 4, 2017
7X0Y
DownloadVisualize
BU of 7x0y by Molmil
Cryo-EM Structure of Arabidopsis CRY2 tetramer in complex with CIB1 fragment
Descriptor: CIB1 fragment, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hao, Y.H, Zhang, X, Zhang, P.
Deposit date:2022-02-22
Release date:2023-01-04
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling.
Plant Commun., 4, 2023
7X0X
DownloadVisualize
BU of 7x0x by Molmil
Cryo-EM Structure of Arabidopsis CRY2 in active conformation
Descriptor: Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hao, Y.H, Zhang, X, Zhang, P.
Deposit date:2022-02-22
Release date:2023-01-04
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling.
Plant Commun., 4, 2023
1YJW
DownloadVisualize
BU of 1yjw by Molmil
Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10, 50S ribosomal protein L10e, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-15
Release date:2005-04-26
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of Mlsbk Antibiotics Bound to Mutated Large Ribosomal Subunits Provide a Structural Explanation for Resistance.
Cell(Cambridge,Mass.), 121, 2005
1WBS
DownloadVisualize
BU of 1wbs by Molmil
Identification of novel p38 alpha MAP Kinase inhibitors using fragment-based lead generation.
Descriptor: 3-FLUORO-5-MORPHOLIN-4-YL-N-[3-(2-PYRIDIN-4-YLETHYL)-1H-INDOL-5-YL]BENZAMIDE, GLYCEROL, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Tickle, J, Cleasby, A, Devine, L.A, Jhoti, H.
Deposit date:2004-11-05
Release date:2005-11-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of Novel P38Alpha Map Kinase Inhibitors Using Fragment-Based Lead Generation.
J.Med.Chem., 48, 2005
1RC7
DownloadVisualize
BU of 1rc7 by Molmil
Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3', Ribonuclease III
Authors:Blaszczyk, J, Gan, J, Ji, X.
Deposit date:2003-11-03
Release date:2004-03-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Noncatalytic Assembly of Ribonuclease III with Double-Stranded RNA.
Structure, 12, 2004
1WBN
DownloadVisualize
BU of 1wbn by Molmil
fragment based p38 inhibitors
Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE 14, N-(3-TERT-BUTYL-1H-PYRAZOL-5-YL)-N'-{4-CHLORO-3-[(PYRIDIN-3-YLOXY)METHYL]PHENYL}UREA
Authors:Cleasby, A, Devine, L.A, Gill, A.L, Jhoti, H.
Deposit date:2004-11-04
Release date:2005-11-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of Novel P38Alpha Map Kinase Inhibitors Using Fragment-Based Lead Generation.
J.Med.Chem., 48, 2005
7B93
DownloadVisualize
BU of 7b93 by Molmil
Cryo-EM structure of mitochondrial complex I from Mus musculus inhibited by IACS-2858 at 3.0 A
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1-[[3-(4-methylsulfonylpiperidin-1-yl)phenyl]methyl]-5-[3-[4-(trifluoromethyloxy)phenyl]-1,2,4-oxadiazol-5-yl]pyridin-2-one, ...
Authors:Chung, I, Hirst, J.
Deposit date:2020-12-14
Release date:2021-05-26
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Cork-in-bottle mechanism of inhibitor binding to mammalian complex I.
Sci Adv, 7, 2021
1ZTX
DownloadVisualize
BU of 1ztx by Molmil
West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab
Descriptor: Envelope protein, Heavy Chain of E16 Antibody, Light Chain of E16 Antibody
Authors:Nybakken, G.E, Oliphant, T, Diamond, M.S, Fremont, D.H.
Deposit date:2005-05-27
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of West Nile virus neutralization by a therapeutic antibody.
Nature, 437, 2005
2BCZ
DownloadVisualize
BU of 2bcz by Molmil
Crystal Structure of a minimal, mutant all-RNA hairpin ribozyme (U39C, G8I, 2'deoxy A-1)
Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*IP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(DA)P*GP*UP*CP*CP*AP*CP*CP*G)-3'), ...
Authors:Salter, J.D, Wedekind, J.E.
Deposit date:2005-10-19
Release date:2006-02-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.
Biochemistry, 45, 2006
1P0B
DownloadVisualize
BU of 1p0b by Molmil
Crystal Structure Of tRNA-Guanine Transglycosylase (TGT) From Zymomonas mobilis Complexed With Archaeosine Precursor, Preq0
Descriptor: 2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Stubbs, M.T, Heine, A, Reuter, K, Klebe, G.
Deposit date:2003-04-10
Release date:2003-09-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Flexible adaptations in the structure of the tRNA-modifying enzyme tRNA-guanine transglycosylase and their implications for substrate selectivity, reaction mechanism and structure-based drug design
Chembiochem, 4, 2003
1W7H
DownloadVisualize
BU of 1w7h by Molmil
p38 Kinase crystal structure in complex with small molecule inhibitor
Descriptor: 3-(BENZYLOXY)PYRIDIN-2-AMINE, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Jhoti, H, Gill, A, Cleasby, A, Devine, L.
Deposit date:2004-09-02
Release date:2005-02-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.214 Å)
Cite:Fragment-Based Lead Discovery Using X-Ray Crystallography
J.Med.Chem., 48, 2005
1W83
DownloadVisualize
BU of 1w83 by Molmil
p38 Kinase crystal structure in complex with small molecule inhibitor
Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE 14, N-[4-CHLORO-3-(PYRIDIN-3-YLOXYMETHYL)-PHENYL]-3-FLUORO-
Authors:Tickle, J, Jhoti, H, Cleasby, A, Devine, L.
Deposit date:2004-09-16
Release date:2005-02-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of novel p38alpha MAP kinase inhibitors using fragment-based lead generation.
J. Med. Chem., 48, 2005
7EFQ
DownloadVisualize
BU of 7efq by Molmil
Crystal structure of hPPARgamma ligand binding domain complexed with rosiglitazone-based fluorescence probe
Descriptor: (5S)-5-[[4-[2-[[7-(diethylamino)-2-oxidanylidene-chromen-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
Authors:Yoshikawa, C, Ishida, H, Ohashi, N, Itoh, T.
Deposit date:2021-03-23
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis of a Coumarin-Based PPAR gamma Fluorescence Probe for Competitive Binding Assay.
Int J Mol Sci, 22, 2021
1P0E
DownloadVisualize
BU of 1p0e by Molmil
CRYSTAL STRUCTURE OF ZYMOMONAS MOBILIS tRNA-GUANINE TRANSGLYCOSYLASE (TGT) COCRYSTALLISED WITH PREQ1 AT PH 5.5
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Stubbs, M.T, Heine, A, Reuter, K, Klebe, G.
Deposit date:2003-04-10
Release date:2003-09-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Flexible adaptations in the structure of the tRNA-modifying enzyme tRNA-guanine transglycosylase and their implications for substrate selectivity, reaction mechanism and structure-based drug design
Chembiochem, 4, 2003
1P18
DownloadVisualize
BU of 1p18 by Molmil
Hypoxanthine Phosphoribosyltransferase from Trypanosoma cruzi, K68R mutant, ternary substrates complex
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 7-HYDROXY-PYRAZOLO[4,3-D]PYRIMIDINE, MAGNESIUM ION, ...
Authors:Canyuk, B, Eakin, A.E, Craig III, S.P.
Deposit date:2003-04-11
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interactions at the dimer interface influence the relative efficiencies for purine nucleotide synthesis and pyrophosphorolysis in a phosphoribosyltransferase
J.Mol.Biol., 335, 2004
7Q3B
DownloadVisualize
BU of 7q3b by Molmil
Crystal structure of human STING in complex with 3'3'-c-(2'F,2'dA-isonucA)MP
Descriptor: 3'3'-c-(2'F,2'dA-isonucA)MP, Stimulator of interferon genes protein
Authors:Smola, M, Klima, M, Boura, E.
Deposit date:2021-10-27
Release date:2022-06-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.55733919 Å)
Cite:Discovery of isonucleotidic CDNs as potent STING agonists with immunomodulatory potential.
Structure, 30, 2022

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon