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6F8Z
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BU of 6f8z by Molmil
Structure of the family GH92 alpha-mannosidase BT3130 from Bacteroides thetaiotaomicron
Descriptor: 1,2-ETHANEDIOL, Alpha-1,2-mannosidase, putative, ...
Authors:Thompson, A.J, Spears, R.J, Zhu, Y, Suits, M.D.L, Williams, S.J, Gilbert, H.J, Davies, G.J.
Deposit date:2017-12-13
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Bacteroides thetaiotaomicron generates diverse alpha-mannosidase activities through subtle evolution of a distal substrate-binding motif.
Acta Crystallogr D Struct Biol, 74, 2018
7T7Q
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BU of 7t7q by Molmil
R-27 In Complex with S. aureus DHFR and alpha-NADPH - Remediated for comparison with tNADPH
Descriptor: 6-ethyl-5-{(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine, ACETATE ION, Dihydrofolate reductase, ...
Authors:Reeve, S.M, Wang, S, Donald, B.R, Wright, D.L.
Deposit date:2021-12-15
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chiral evasion and stereospecific antifolate resistance in Staphylococcus aureus.
Plos Comput.Biol., 18, 2022
6FBO
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BU of 6fbo by Molmil
Human Methionine Adenosyltransferase II mutant (S114A) in I222 crystal form
Descriptor: (DIPHOSPHONO)AMINOPHOSPHONIC ACID, 1,2-ETHANEDIOL, ADENOSINE, ...
Authors:Panmanee, J, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2017-12-19
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control and regulation of S-Adenosylmethionine biosynthesis by the regulatory beta subunit and quinolone-based compounds.
Febs J., 286, 2019
9DWF
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BU of 9dwf by Molmil
Nucleosome containing a 1-nt gap at SHL-4.5
Descriptor: 601 I strand (damaged strand 1), 601 J strand (non-damaged strand), 601 K strand (damaged strand 2), ...
Authors:Weaver, T.M, Ryan, B.J, Freudenthal, B.D.
Deposit date:2024-10-09
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Nucleosome containing a 1-nt gap at SHL-4.5
To Be Published
9DWJ
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BU of 9dwj by Molmil
Nucleosome containing a 1-nt gap at SHL-3.5
Descriptor: 601 I strand (damaged strand 1), 601 J strand (non-damaged strand), 601 K strand (damaged strand 2), ...
Authors:Weaver, T.M, Ryan, B.J, Freudenthal, B.D.
Deposit date:2024-10-09
Release date:2025-01-15
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Nucleosome containing a 1-nt gap at SHL-3.5
To Be Published
9DWK
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BU of 9dwk by Molmil
DNA Polymerase Beta bound to a nucleosome containing a 1-nt gap at SHL-3.5
Descriptor: 601 I strand (damaged strand 1), 601 J strand (non-damaged strand), 601 K strand (damaged strand 2), ...
Authors:Weaver, T.M, Ryan, B.J, Freudenthal, B.D.
Deposit date:2024-10-09
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:DNA Polymerase Beta bound to a nucleosome containing a 1-nt gap at SHL-3.5
To Be Published
5MG2
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BU of 5mg2 by Molmil
Crystal structure of the second bromodomain of human TAF1 in complex with BAY-299 chemical probe
Descriptor: 1,2-ETHANEDIOL, 6-(3-oxidanylpropyl)-2-(1,3,6-trimethyl-2-oxidanylidene-benzimidazol-5-yl)benzo[de]isoquinoline-1,3-dione, Transcription initiation factor TFIID subunit 1
Authors:Tallant, C, Bouche, L, Holton, S.J, Fedorov, O, Siejka, P, Picaud, S, Krojer, T, Srikannathasan, V, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hartung, I.V, Haendler, B, Muller, S, Huber, K.V.M, Structural Genomics Consortium (SGC)
Deposit date:2016-11-20
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Benzoisoquinolinediones as Potent and Selective Inhibitors of BRPF2 and TAF1/TAF1L Bromodomains.
J. Med. Chem., 60, 2017
7SG0
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BU of 7sg0 by Molmil
W316 TCR in complex with HLA-DQ2-omega1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DQ2-glia-omega1 peptide, ...
Authors:Ciacchi, L, Farenc, C, Petersen, J, Reid, H.H, Rossjohn, J.
Deposit date:2021-10-04
Release date:2022-02-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of T cell receptor specificity and cross-reactivity of two HLA-DQ2.5-restricted gluten epitopes in celiac disease.
J.Biol.Chem., 298, 2022
7SG1
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BU of 7sg1 by Molmil
XPA5 TCR in complex with HLA-DQ2-alpha1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Ciacchi, L, Farenc, C, Petersen, J, Reid, H.H, Rossjohn, J.
Deposit date:2021-10-04
Release date:2022-02-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of T cell receptor specificity and cross-reactivity of two HLA-DQ2.5-restricted gluten epitopes in celiac disease.
J.Biol.Chem., 298, 2022
7SG2
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BU of 7sg2 by Molmil
XPA5 TCR in complex with HLA-DQ2-omega1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Ciacchi, L, Farenc, C, Petersen, J, Reid, H.H, Rossjohn, J.
Deposit date:2021-10-04
Release date:2022-02-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis of T cell receptor specificity and cross-reactivity of two HLA-DQ2.5-restricted gluten epitopes in celiac disease.
J.Biol.Chem., 298, 2022
8BBI
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BU of 8bbi by Molmil
Crystal structure of Xyn11 double mutant L271S, K275H from Psedothermotoga thermarum
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, Beta-xylanase, GLYCEROL
Authors:Cea-Rama, I, Sanz-Aparicio, J.
Deposit date:2022-10-13
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Xyn11 double mutant L271S, K275H from Pseudothermotoga thermarum
To be published
9DWH
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BU of 9dwh by Molmil
DNA Polymerase Beta bound to a nucleosome containing a 1-nt gap at SHL-4.5 (State 2, composite)
Descriptor: 601 I strand (damaged strand 1), 601 J strand (non-damaged strand), 601 K strand (damaged strand 2), ...
Authors:Weaver, T.M, Ryan, B.J, Freudenthal, B.D.
Deposit date:2024-10-09
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:DNA Polymerase Beta bound to a nucleosome containing a 1-nt gap at SHL-4.5 (State 2, composite)
To Be Published
6LT7
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BU of 6lt7 by Molmil
Crystal structure of human RPP20-RPP25 proteins in complex with the P3 domain of lncRNA RMRP
Descriptor: 1,2-ETHANEDIOL, 50-mer RNA, Ribonuclease P protein subunit p20, ...
Authors:Huang, J, Yin, C.
Deposit date:2020-01-21
Release date:2021-01-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of human RPP20-RPP25 proteins in complex with the P3 domain of lncRNA RMRP.
J.Struct.Biol., 213, 2021
6XTA
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BU of 6xta by Molmil
Recombinant human butyrylcholinesterase in complex with (2S)-N-[2-(1-benzylazepan-4-yl)ethyl]-2-(butylamino)-3-(1H-indol-3-yl)propanamide
Descriptor: (2~{S})-2-(butylamino)-3-(1~{H}-indol-3-yl)-~{N}-[2-[(4~{R})-1-(phenylmethyl)azepan-4-yl]ethyl]propanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brazzolotto, X, Nachon, F, Meden, A, Knez, D, Gobec, S.
Deposit date:2020-01-15
Release date:2020-10-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-activity relationship study of tryptophan-based butyrylcholinesterase inhibitors.
Eur.J.Med.Chem., 208, 2020
9DWL
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BU of 9dwl by Molmil
Nucleosome containing a 1-nt gap at SHL-5.5
Descriptor: 601 I strand (damaged strand 1), 601 J strand (non-damaged strand), 601 K strand (damaged strand 2), ...
Authors:Weaver, T.M, Ryan, B.J, Freudenthal, B.D.
Deposit date:2024-10-09
Release date:2025-01-15
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Nucleosome containing a 1-nt gap at SHL-5.5
To Be Published
6FRD
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BU of 6frd by Molmil
Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-637
Descriptor: 1-cycloheptyl-3-{4-methoxy-3-[(2-methoxyphenyl)methoxy]phenyl}-4,4-dimethyl-4,5-dihydro- 1H-pyrazol-5-one, FORMIC ACID, GUANIDINE, ...
Authors:Singh, A.K, Brown, D.G.
Deposit date:2018-02-15
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-637
To be published
5BVU
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BU of 5bvu by Molmil
Crystal structure of Thermoanaerobacterium xylolyticum GH116 beta-glucosidase
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Charoenwattanasatien, R, Pengthaisong, S, Sansenya, S, Mutoh, R, Tanaka, H, Kurisu, G, Ketudat Cairns, J.R.
Deposit date:2015-06-05
Release date:2016-05-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Bacterial beta-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2).
Acs Chem.Biol., 11, 2016
6AU3
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BU of 6au3 by Molmil
Crystal structure of SETDB1 Tudor domain with aryl triazole fragments
Descriptor: 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, N-{[2-(3,5-dimethyl-4H-1,2,4-triazol-4-yl)phenyl]methyl}acetamide, ...
Authors:MADER, P, Mendoza-Sanchez, R, IQBAL, A, DONG, A, DOBROVETSKY, E, CORLESS, V.B, LIEW, S.K, TEMPEL, W, SMIL, D, DELA SENA, C.C, KENNEDY, S, DIAZ, D, HOLOWNIA, A, VEDADI, M, BROWN, P.J, SANTHAKUMAR, V, Bountra, C, Edwards, A.M, YUDIN, A.K, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2017-08-30
Release date:2017-09-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of SETDB1 Tudor domain with aryl triazole fragments
to be published
8QQL
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BU of 8qql by Molmil
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1) - R312H mutant
Descriptor: Inward rectifier potassium channel 2
Authors:Fernandes, C.A.H, Zuniga, D, Venien-Bryan, C.
Deposit date:2023-10-05
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Biochemical, biophysical, and structural investigations of two mutants (C154Y and R312H) of the human Kir2.1 channel involved in the Andersen-Tawil syndrome.
Faseb J., 38, 2024
7Y60
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BU of 7y60 by Molmil
Cryo-EM structure of human CAF1LC bound right-handed Di-tetrasome
Descriptor: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
Authors:Liu, C.P, Yu, C, Yu, Z.Y, Xu, R.M.
Deposit date:2022-06-18
Release date:2023-08-16
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
7AJA
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BU of 7aja by Molmil
Structure of DYRK1A in complex with compound 28
Descriptor: 1-[4-(1-benzofuran-5-yl)pyridin-2-yl]piperazine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Dokurno, P, Surgenor, A.E, Kotschy, A.
Deposit date:2020-09-28
Release date:2021-05-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Guided Discovery of Potent and Selective DYRK1A Inhibitors.
J.Med.Chem., 64, 2021
6B1P
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BU of 6b1p by Molmil
Crystal Structure of Glutamate-tRNA Synthetase from Helicobacter pylori
Descriptor: 1,2-ETHANEDIOL, Glutamate--tRNA ligase 1
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-09-18
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Glutamate-tRNA Synthetase from Helicobacter pylori
to be published
5A14
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BU of 5a14 by Molmil
Human CDK2 with type II inhibitor
Descriptor: 1-[4-(2-azanylpyrimidin-4-yl)oxyphenyl]-3-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]urea, CYCLIN-DEPENDENT KINASE 2
Authors:Alexander, L.T, Elkins, J.M, Kopec, J, Fedorov, O, Savitsky, P.A, Moebitz, H, Cowan-Jacob, S.W, Szklarz, M, Pike, A.C.W, Carpenter, E.P, Krojer, T, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2015-04-27
Release date:2015-07-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Type II Inhibitors Targeting Cdk2.
Acs Chem.Biol., 10, 2015
8GF3
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BU of 8gf3 by Molmil
Crystallographic structure from BlMan5_7
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GH5 Mannanase, ...
Authors:Briganti, L, Araujo, E.A, Polikarpov, I.
Deposit date:2023-03-07
Release date:2024-04-17
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Unravelling biochemical and structural features of Bacillus licheniformis GH5 mannanase using site-directed mutagenesis and high-resolution protein crystallography studies.
Int.J.Biol.Macromol., 274, 2024
6RBX
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BU of 6rbx by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an adenine derivative
Descriptor: 3-(6-azanyl-8-bromanyl-purin-9-yl)propan-1-ol, CITRIC ACID, NAD kinase 1
Authors:Gelin, M, Labesse, G.
Deposit date:2019-04-11
Release date:2020-02-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020

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