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PDB: 567 results

2HGY
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BU of 2hgy by Molmil
Structure of S65A Y66F E222A GFP variant after cyclization and carbon-carbon bond cleavage
Descriptor: Green fluorescent protein
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-27
Release date:2007-03-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
4J88
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BU of 4j88 by Molmil
Dark-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 66
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-06-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
3UG0
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BU of 3ug0 by Molmil
Crystal structure of a Trp-less green fluorescent protein translated by the simplified genetic code
Descriptor: Green fluorescent protein
Authors:Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D.
Deposit date:2011-11-02
Release date:2012-10-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Simplification of the genetic code: restricted diversity of genetically encoded amino acids.
Nucleic Acids Res., 40, 2012
1RRX
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BU of 1rrx by Molmil
Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein
Descriptor: SIGF1-GFP fusion protein
Authors:Bae, J.H, Paramita Pal, P, Moroder, L, Huber, R, Budisa, N.
Deposit date:2003-12-09
Release date:2004-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein.
Chembiochem, 5, 2004
1BFP
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BU of 1bfp by Molmil
BLUE VARIANT OF GREEN FLUORESCENT PROTEIN
Descriptor: BLUE FLUORESCENT PROTEIN
Authors:Wachter, R.M, Remington, S.J.
Deposit date:1997-04-09
Release date:1997-07-07
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and photodynamic behavior of the blue emission variant Y66H/Y145F of green fluorescent protein.
Biochemistry, 36, 1997
1EMK
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BU of 1emk by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Palm, G, Zdanov, A, Wlodawer, A.
Deposit date:1997-03-31
Release date:1997-08-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural basis for spectral variations in green fluorescent protein.
Nat.Struct.Biol., 4, 1997
6UHM
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BU of 6uhm by Molmil
Crystal Structure of a Physical Mixture of C148 mGFP and scDNA-1
Descriptor: C148 mGFP
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
1F0B
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BU of 1f0b by Molmil
CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J.
Deposit date:2000-05-15
Release date:2000-11-17
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein.
J.Mol.Biol., 301, 2000
7O7W
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BU of 7o7w by Molmil
Crystal structure of rsEGFP2 mutant V151L in the non-fluorescent off-state the determined by serial femtosecond crystallography at room temperature
Descriptor: Green fluorescent protein
Authors:Hadjidemetriou, K, Coquelle, N, Barends, T.R.M, Schlichting, I, Colletier, J.-P, Weik, M.
Deposit date:2021-04-13
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.
Chemphyschem, 23, 2022
4J89
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BU of 4j89 by Molmil
Different photochemical events of a genetically encoded aryl azide define and modulate GFP fluorescence
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-06-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
2Q6P
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BU of 2q6p by Molmil
The Chemical Control of Protein Folding: Engineering a Superfolder Green Fluorescent Protein
Descriptor: Green fluorescent protein mutant 3
Authors:Steiner, T, Hess, P, Bae, J.H, Wiltschi, B, Moroder, L, Budisa, N.
Deposit date:2007-06-05
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Synthetic biology of proteins: tuning GFPs folding and stability with fluoroproline.
Plos One, 3, 2008
3SG3
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BU of 3sg3 by Molmil
Crystal Structure of GCaMP3-D380Y
Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
Authors:Schreiter, E.R, Akerboom, J, Looger, L.L.
Deposit date:2011-06-14
Release date:2012-06-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Optimization of a GCaMP calcium indicator for neural activity imaging.
J.Neurosci., 32, 2012
8C7I
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BU of 8c7i by Molmil
Crystal structure of the PS2 assembly factor Psb32 from the cyanobactium Thermosyncechococcus vestitus (formerly elongatus)
Descriptor: Green fluorescent protein,Tll0404 protein
Authors:Liauw, P, Gasper, R, Nowaczyk, M.M, Hofmann, E.
Deposit date:2023-01-16
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Cryo-EM analysis of a novel photosystem II assembly intermediate that binds Psb32
To Be Published
1EMB
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BU of 1emb by Molmil
GREEN FLUORESCENT PROTEIN (GFP) FROM AEQUOREA VICTORIA, GLN 80 REPLACED WITH ARG
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Brejc, K, Sixma, T.
Deposit date:1997-01-08
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis for dual excitation and photoisomerization of the Aequorea victoria green fluorescent protein.
Proc.Natl.Acad.Sci.USA, 94, 1997
1F09
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BU of 1f09 by Molmil
CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP) VARIANT YFP-H148Q WITH TWO BOUND IODIDES
Descriptor: GREEN FLUORESCENT PROTEIN, IODIDE ION
Authors:Wachter, R.M, Yarbrough, D, Kallio, K, Remington, S.J.
Deposit date:2000-05-15
Release date:2000-11-17
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystallographic and energetic analysis of binding of selected anions to the yellow variants of green fluorescent protein.
J.Mol.Biol., 301, 2000
4Z4M
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BU of 4z4m by Molmil
Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein
Descriptor: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
Authors:Rohaim, A, Kawasaki, M, Wakatsuki, S.
Deposit date:2015-04-02
Release date:2016-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
3K1K
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BU of 3k1k by Molmil
Green fluorescent protein bound to enhancer nanobody
Descriptor: Enhancer, Green Fluorescent Protein
Authors:Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
Deposit date:2009-09-28
Release date:2009-12-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
6WV3
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BU of 6wv3 by Molmil
Human VKOR with warfarin
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, S-WARFARIN, Vitamin K epoxide reductase, ...
Authors:Liu, S, Sukumar, N, Li, W.
Deposit date:2020-05-05
Release date:2020-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation.
Science, 371, 2021
1MYW
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BU of 1myw by Molmil
CRYSTAL STRUCTURE OF A YELLOW FLUORESCENT PROTEIN WITH IMPROVED MATURATION AND REDUCED ENVIRONMENTAL SENSITIVITY
Descriptor: Green fluorescent protein
Authors:Rekas, A, Alattia, J.R, Nagai, T, Miyawaki, A, Ikura, M.
Deposit date:2002-10-04
Release date:2003-01-14
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Venus, a Yellow Fluorescent Protein with Improved Maturation and Reduced Environmental Sensitivity
J.Biol.Chem., 277, 2002
4I2Y
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BU of 4i2y by Molmil
Crystal Structure of the genetically encoded calcium indicator RGECO1
Descriptor: CALCIUM ION, RGECO1
Authors:Akerboom, J, Looger, L.L, Schreiter, E.R.
Deposit date:2012-11-23
Release date:2013-07-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Front Mol Neurosci, 6, 2013
8G0I
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BU of 8g0i by Molmil
High Affinity nanobodies against GFP
Descriptor: CHLORIDE ION, Green fluorescent protein, LaG24 Nanobody, ...
Authors:Ketaren, N.E, Rout, M.P, Almo, S.
Deposit date:2023-01-31
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High Affinity nanobodies against GFP
To Be Published
6CZQ
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BU of 6czq by Molmil
A V-to-F substitution in SK2 channels causes Ca2+ hypersensitivity and improves locomotion in a C. elegans ALS model
Descriptor: CALCIUM ION, Calmodulin-1, SULFATE ION, ...
Authors:Nam, Y.W, Zhang, M.
Deposit date:2018-04-09
Release date:2018-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A V-to-F substitution in SK2 channels causes Ca2+hypersensitivity and improves locomotion in a C. elegans ALS model.
Sci Rep, 8, 2018
3CLN
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BU of 3cln by Molmil
STRUCTURE OF CALMODULIN REFINED AT 2.2 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, CALMODULIN
Authors:Babu, Y.S, Bugg, C.E, Cook, W.J.
Deposit date:1988-05-11
Release date:1988-07-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of calmodulin refined at 2.2 A resolution.
J.Mol.Biol., 204, 1988
1HUY
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BU of 1huy by Molmil
CRYSTAL STRUCTURE OF CITRINE, AN IMPROVED YELLOW VARIANT OF GREEN FLUORESCENT PROTEIN
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Griesbeck, O, Baird, G.S, Campbell, R.E, Zacharias, D.A, Tsien, R.Y.
Deposit date:2001-01-04
Release date:2001-07-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications
J.Biol.Chem., 276, 2001
6ZUI
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BU of 6zui by Molmil
Crystal structure of the Cys-Ser mutant of the cpYFP-based biosensor for hypochlorous acid
Descriptor: HTH-type transcriptional repressor NemR,Green fluorescent protein,Green fluorescent protein,HTH-type transcriptional repressor NemR
Authors:Tossounian, M.A, Van Molle, I, Messens, J.
Deposit date:2020-07-23
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.200082 Å)
Cite:Hypocrates is a genetically encoded fluorescent biosensor for (pseudo)hypohalous acids and their derivatives.
Nat Commun, 13, 2022

222415

数据于2024-07-10公开中

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