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2QGQ
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Crystal structure of TM_1862 from Thermotoga maritima. Northeast Structural Genomics Consortium target VR77
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Protein TM_1862
Authors:Forouhar, F, Neely, H, Hussain, M, Seetharaman, J, Fang, Y, Chen, C.X, Cunningham, K, Conover, K, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-06-29
Release date:2007-07-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Post-translational Modification of Ribosomal Proteins: STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF RimO FROM THERMOTOGA MARITIMA, A RADICAL S-ADENOSYLMETHIONINE METHYLTHIOTRANSFERASE.
J.Biol.Chem., 285, 2010
2QKI
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Human C3c in complex with the inhibitor compstatin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, Complement C3, ...
Authors:Janssen, B.J.C, Halff, E.F, Lambris, J.D, Gros, P.
Deposit date:2007-07-11
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of compstatin in complex with complement component C3c reveals a new mechanism of complement inhibition.
J.Biol.Chem., 282, 2007
2I7F
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Sphingomonas yanoikuyae B1 ferredoxin
Descriptor: CITRIC ACID, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of dioxygenase, ...
Authors:Ramaswamy, S, Brown, E.N.
Deposit date:2006-08-30
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.
Bmc Struct.Biol., 7, 2007
2QNP
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HIV-1 Protease in complex with a iodo decorated pyrrolidine-based inhibitor
Descriptor: CHLORIDE ION, Gag-Pol polyprotein (Pr160Gag-Pol), N,N'-(3S,4S)-pyrrolidine-3,4-diylbis[N-(4-iodobenzyl)benzenesulfonamide]
Authors:Boettcher, J, Blum, A, Heine, A, Diederich, W.E, Klebe, G.
Deposit date:2007-07-19
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structure-Guided Design of C2-Symmetric HIV-1 Protease Inhibitors Based on a Pyrrolidine Scaffold.
J.Med.Chem., 51, 2008
1GU8
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SENSORY RHODOPSIN II
Descriptor: CHLORIDE ION, RETINAL, SENSORY RHODOPSIN II
Authors:Edman, K, Royant, A, Nollert, P, Maxwell, C.A, Pebay-Peyroula, E, Navarro, J, Neutze, R, Landau, E.M.
Deposit date:2002-01-24
Release date:2002-04-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Early Structural Rearrangements in the Photocycle of an Integral Membrane Sensory Receptor
Structure, 10, 2002
1GVM
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CHOLINE BINDING DOMAIN OF THE MAJOR AUTOLYSIN (C-LYTA) FROM STREPTOCOCCUS PNEUMONIAE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AUTOLYSIN, CHOLINE ION, ...
Authors:Fernandez-Tornero, C, Lopez, R, Garcia, E, Gimenez-Gallego, G, Romero, A.
Deposit date:2002-02-15
Release date:2002-08-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Two New Crystal Forms of the Choline-Binding Domain of the Major Pneumococcal Autolysin: Insights Into the Dynamics of the Active Dimeric
J.Mol.Biol., 321, 2002
1W80
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Crystal structure of the alpha-adaptin appendage domain, from the AP2 adaptor complex, bound to 2 peptides from Synaptojanin170
Descriptor: ADAPTER-RELATED PROTEIN COMPLEX 2 ALPHA 2 SUBUNIT, BENZAMIDINE, CARBONATE ION, ...
Authors:Ford, M.G.J, Praefcke, G.J.K, McMahon, H.T.
Deposit date:2004-09-14
Release date:2004-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolving Nature of the Ap2 Alpha-Appendage Hub During Clathrin-Coated Vesicle Endocytosis.
Embo J., 23, 2004
2QOP
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Crystal structure of the transcriptional regulator AcrR from Escherichia coli
Descriptor: HTH-type transcriptional regulator acrR
Authors:Li, M, Gu, R, Su, C.-C, McDermott, G, Yu, E.W.
Deposit date:2007-07-20
Release date:2008-02-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the transcriptional regulator AcrR from Escherichia coli.
J.Mol.Biol., 374, 2007
2QLM
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Glycogen phosphorylase in complex with FN67
Descriptor: Glycogen phosphorylase, muscle form, N-{[(4-methylphenyl)carbonyl]carbamoyl}-beta-D-glucopyranosylamine
Authors:Oikonomakos, N.G, Chryina, E.D, Tiraidis, C, Kosmopoulou, M.N, Zographos, S.E, Leonidas, D.D.
Deposit date:2007-07-13
Release date:2008-07-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:N-(4-substituted-benzoyl)-N'-(beta-D-glucopyranosyl)ureas, inhibitors of glycogen phosphorylase: synthesis, kinetic and crystallographic evaluation
To be Published
2QYB
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BU of 2qyb by Molmil
Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA
Descriptor: Membrane protein, putative
Authors:Nocek, B, Duggan, E, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-08-14
Release date:2007-08-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA.
To be Published
2F8C
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BU of 2f8c by Molmil
Crystal structure of FPPS in complex with Zoledronate
Descriptor: Farnesyl Diphosphate Synthase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
Deposit date:2005-12-02
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
2F92
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Crystal structure of human FPPS in complex with alendronate
Descriptor: 4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE, Farnesyl Diphosphate Synthase, PHOSPHATE ION, ...
Authors:Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
Deposit date:2005-12-05
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
2FBI
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The crystal structure of transcriptional regulator PA4135
Descriptor: probable transcriptional regulator
Authors:Lunin, V.V, Evdokimova, E, Kudritska, M, Cuff, M.E, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-09
Release date:2005-12-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of transcriptional regulator PA4135
To be Published
2F8Z
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Crystal structure of human FPPS in complex with zoledronate and isopentenyl diphosphate
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Farnesyl Diphosphate Synthase, MAGNESIUM ION, ...
Authors:Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
Deposit date:2005-12-02
Release date:2006-02-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
2QNQ
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HIV-1 Protease in complex with a chloro decorated pyrrolidine-based inhibitor
Descriptor: CHLORIDE ION, Gag-Pol polyprotein (Pr160Gag-Pol), N,N'-(3S,4S)-pyrrolidine-3,4-diylbis(N-benzyl-2-chlorobenzenesulfonamide)
Authors:Boettcher, J, Blum, A, Heine, A, Diederich, W.E, Klebe, G.
Deposit date:2007-07-19
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Guided Design of C2-Symmetric HIV-1 Protease Inhibitors Based on a Pyrrolidine Scaffold.
J.Med.Chem., 51, 2008
2F89
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Crystal structure of human FPPS in complex with pamidronate
Descriptor: Farnesyl Diphosphate Synthase, MANGANESE (II) ION, PAMIDRONATE, ...
Authors:Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
Deposit date:2005-12-02
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
2KKF
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BU of 2kkf by Molmil
Solution structure of MLL CXXC domain in complex with palindromic CPG DNA
Descriptor: 5'-D(*CP*CP*CP*TP*GP*CP*GP*CP*AP*GP*GP*G)-3', Histone-lysine N-methyltransferase HRX, ZINC ION
Authors:Cierpicki, T, Riesbeck, J.E, Grembecka, J.E, Lukasik, S.M, Popovic, R, Omonkowska, M, Shultis, D.S, Zeleznik-Le, N.J, Bushweller, J.H.
Deposit date:2009-06-18
Release date:2009-12-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the MLL CXXC domain-DNA complex and its functional role in MLL-AF9 leukemia.
Nat.Struct.Mol.Biol., 17, 2010
2F94
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Crystal structure of human FPPS in complex with ibandronate
Descriptor: Farnesyl Diphosphate Synthase, IBANDRONATE, PHOSPHATE ION, ...
Authors:Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
Deposit date:2005-12-05
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
2FE5
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The Crystal Structure of the Second PDZ Domain of Human DLG3
Descriptor: GLYCEROL, Presynaptic protein SAP102, SULFATE ION
Authors:Ugochukwu, E, Phillips, C, Schoch, G, Berridge, G, Salah, E, Colebrook, S, Smee, C, Savitsky, P, Bray, J, Elkins, J, Doyle, D, Bunkoczi, G, Debreczeni, J, Turnbull, A, Gorrec, F, von Delft, F, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Structural Genomics Consortium (SGC)
Deposit date:2005-12-15
Release date:2005-12-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Crystal Structure of the Second PDZ Domain of Human DLG3
To be Published
2QH2
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Solution structure of the CR7 terminal hairpin loop from human telomerase RNA
Descriptor: Human telomerase RNA CR7 terminal hairpin loop
Authors:Feigon, J, Theimer, C.A, Chim, N, Breece, K.E.
Deposit date:2007-06-29
Release date:2007-09-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional characterization of human telomerase RNA processing and cajal body localization signals.
Mol.Cell, 27, 2007
2F6G
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BenM effector binding domain
Descriptor: CHLORIDE ION, HTH-type transcriptional regulator benM, SULFATE ION
Authors:Clark, T, Haddad, S, Ezezika, O, Neidle, E, Momany, C.
Deposit date:2005-11-29
Release date:2006-10-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.908 Å)
Cite:Distinct Effector-binding Sites Enable Synergistic Transcriptional Activation by BenM, a LysR-type Regulator.
J.Mol.Biol., 367, 2007
2F7B
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CatM effector binding domain
Descriptor: CHLORIDE ION, HTH-type transcriptional regulator catM, SULFATE ION
Authors:Clark, T, Haddad, S, Ezezika, O, Neidle, E, Momany, C.
Deposit date:2005-11-30
Release date:2006-10-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Distinct Effector-binding Sites Enable Synergistic Transcriptional Activation by BenM, a LysR-type Regulator.
J.Mol.Biol., 367, 2007
2F8D
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BU of 2f8d by Molmil
BenM effector-Binding domain crystallized from high pH conditions
Descriptor: BENZOIC ACID, GLYCEROL, HTH-type transcriptional regulator benM, ...
Authors:Ezezika, O.C, Haddad, S, Neidle, E.L, Momany, C.
Deposit date:2005-12-02
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Oligomerization of BenM, a LysR-type transcriptional regulator: structural basis for the aggregation of proteins in this family.
Acta Crystallogr.,Sect.F, 63, 2007
8BO4
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COAGULATION FACTOR XI PROTEASE DOMAIN IN COMPLEX WITH ACTIVE SITE INHIBITOR 1
Descriptor: 4-(aminomethyl)-~{N}-[(2~{S})-1-oxidanylidene-3-phenyl-1-[[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]amino]propan-2-yl]cyclohexane-1-carboxamide, Coagulation factor XIa light chain, GLYCEROL
Authors:Schaefer, M, Roehrig, S, Ackerstaff, J, Nunez, E.J, Gericke, K.M, Meier, K, Tersteegen, A, Stampfuss, J, Ellerbrock, P, Meibom, M, Lang, D, Heitmeier, S, Hillisch, A.
Deposit date:2022-11-14
Release date:2023-09-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Design and Preclinical Characterization Program toward Asundexian (BAY 2433334), an Oral Factor XIa Inhibitor for the Prevention and Treatment of Thromboembolic Disorders.
J.Med.Chem., 66, 2023
5CS3
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BU of 5cs3 by Molmil
The structure of the NK1 fragment of HGF/SF complexed with (H)EPPS
Descriptor: 3-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]PROPANE-1-SULFONIC ACID, Hepatocyte growth factor
Authors:Sigurdardottir, A.G, Winter, A, Sobkowicz, A, Fragai, M, Chirgadze, D.Y, Ascher, D.B, Blundell, T.L, Gherardi, E.
Deposit date:2015-07-23
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding.
Chem Sci, 6, 2015

224004

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