PDB: 909 resultsInfo pagesStatus searchChemie searchBIRD

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5D78	Structure of RRM3 Domain of Mip6 at 1.25 A Resolution Descriptor: BETA-MERCAPTOETHANOL, RNA-binding protein MIP6, SULFATE ION Authors: Mohamad, N, Bravo, J. Deposit date: 2015-08-13 Release date: 2016-08-17 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.251 Å) Cite: Structure of RRM3 Domain of Mip6 at 1.25 A Resolution To Be Published
5DDQ	L-glutamine riboswitch bound with L-glutamine soaked with Mn2+ Descriptor: GLUTAMINE, L-glutamine riboswitch RNA (61-MER), MAGNESIUM ION, ... Authors: Ren, A, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
5DDR	L-glutamine riboswitch bound with L-glutamine soaked with Cs+ Descriptor: CESIUM ION, GLUTAMINE, L-glutamine riboswitch RNA (61-MER), ... Authors: Ren, A, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.605 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
5KWQ	Two Tandem RRM Domains of FBP-Interacting Repressor (FIR), also Known as PUF60 Descriptor: Poly(U)-binding-splicing factor PUF60 Authors: Crichlow, G.V, Yang, Y, Zhou, H, Lolis, E.J, Braddock, D.T. Deposit date: 2016-07-18 Release date: 2017-08-23 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60. Plos One, 15, 2020
5KW6	Two Tandem RRM Domains of PUF60 Bound to an AdML Pre-mRNA 3' Splice Site Analogue with a Modified Binding-Site Nucleic Acid Base Descriptor: DNA (30-MER), Poly(U)-binding-splicing factor PUF60 Authors: Crichlow, G.V, Hsiao, H.-H, Albright, R, Lolis, E.J, Braddock, D.T. Deposit date: 2016-07-15 Release date: 2017-08-23 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60. Plos One, 15, 2020
5DDP	L-glutamine riboswitch bound with L-glutamine Descriptor: GLUTAMINE, MAGNESIUM ION, RNA (61-MER), ... Authors: Ren, A, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.302 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
5CYJ	X-ray structure of human RBPMS Descriptor: RNA-binding protein with multiple splicing Authors: Teplova, M, Farazi, T.A, Patel, D.J. Deposit date: 2015-07-30 Release date: 2015-09-30 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS. Q. Rev. Biophys., 49, 2016
5EN1	Crystal structure of hnRNPA2B1 in complex with RNA Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1, RNA (5'-R(*AP*GP*GP*AP*CP*UP*G)-3') Authors: Wu, B.X, Su, S.C, Ma, J.B. Deposit date: 2015-11-09 Release date: 2016-11-09 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.58 Å) Cite: Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1 Nat Commun, 2018
5LSO	Crystal structure of SPF45 UHM domain with cyclic peptide inhibitor Descriptor: LYS-SER-ARG-TRP-ASP-GLU, Splicing factor 45 Authors: Jagtap, P.K.A, Garg, D, Sattler, M. Deposit date: 2016-09-05 Release date: 2016-10-26 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Rational Design of Cyclic Peptide Inhibitors of U2AF Homology Motif (UHM) Domains To Modulate Pre-mRNA Splicing. J. Med. Chem., 59, 2016
5DDO	Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch Descriptor: L-glutamine riboswitch (58-MER), U1 small nuclear ribonucleoprotein A Authors: Ren, A, Patel, D. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
5EV1	Structure I of Intact U2AF65 Recognizing a 3' Splice Site Signal Descriptor: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(*UP*UP*U)-D(P*UP*UP*(BRU)P*U)-R(P*UP*U)-3'), SODIUM ION, ... Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.037 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5EV2	Structure II of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: 1,4-DIETHYLENE DIOXIDE, DI(HYDROXYETHYL)ETHER, DNA (5'-R(P*UP*U)-D(P*UP*U)-R(P*U)-D(P*UP*(BRU)P*U)-3'), ... Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.86 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5EV3	Structure III of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: DNA/RNA (5'-R(P*UP*U)-D(P*U)-R(P*UP*U)-D(P*(BRU)P*UP*U)-3'), Splicing factor U2AF 65 kDa subunit Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.5 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5EV4	Structure IV of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: DNA/RNA (5'-R(P*UP*UP*UP*(UD)P*UP*U)-D(P*(BRU)P*(UD))-R(P*C)-3'), GLYCEROL, Splicing factor U2AF 65 kDa subunit Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.57 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
7Q4L	The solution structure of hsDND1 RRM12 bound to CUUAUUUG RNA Descriptor: Dead end protein homolog 1, RNA (5'-R(*CP*UP*UP*AP*UP*UP*UP*G)-3') Authors: Duszczyk, M.M, Allain, F.H.T. Deposit date: 2021-10-31 Release date: 2022-05-04 Last modified: 2022-10-19 Method: SOLUTION NMR Cite: The solution structure of Dead End bound to AU-rich RNA reveals an unusual mode of tandem RRM-RNA recognition required for mRNA regulation. Nat Commun, 13, 2022
7Q33	Solution structure of RBM39 RRM2 bound to 5'-AGCUUUG-3 Descriptor: RNA (5'-R(*AP*GP*CP*UP*UP*UP*G)-3'), RNA-binding protein 39 Authors: Campagne, S, Allain, F.H. Deposit date: 2021-10-26 Release date: 2023-02-08 Last modified: 2023-09-20 Method: SOLUTION NMR Cite: Molecular basis of RNA-binding and autoregulation by the cancer-associated splicing factor RBM39. Nat Commun, 14, 2023
7QR4	human CPEB3 HDV-like ribozyme Descriptor: RNA CPEB3 ribozyme, U1 small nuclear ribonucleoprotein A Authors: Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. Deposit date: 2022-01-17 Release date: 2022-10-26 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.83 Å) Cite: Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
7Q8A	Crystal structure of tandem domain RRM1-2 of FUBP-interacting repressor (FIR) bound to FUSE ssDNA fragment Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*GP*T)-3'), Poly(U)-binding-splicing factor PUF60, ... Authors: Ni, X, Joerger, A.C, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2021-11-10 Release date: 2022-11-09 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Crystal structure of tandem domain RRM1-2 of FIR bound to FUSE ssDNA fragment To Be Published
7QDD	NMR structure of Npl3 RRM1 bound to the AUCCAA RNA Descriptor: Nucleolar protein 3, RNA (5'-R(*AP*UP*CP*CP*AP*A)-3') Authors: Clery, A, Allain, F.H.-T, Moursy, A. Deposit date: 2021-11-26 Release date: 2022-10-26 Last modified: 2024-01-10 Method: SOLUTION NMR Cite: RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing. Nat Commun, 14, 2023
7QR3	Chimpanzee CPEB3 HDV-like ribozyme Descriptor: GLYCEROL, POTASSIUM ION, U1 small nuclear ribonucleoprotein A, ... Authors: Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. Deposit date: 2022-01-10 Release date: 2022-10-26 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
7QDE	NMR structure of Npl3 RRM12 bound to the AUCCAGUGGAA RNA Descriptor: Nucleolar protein 3, RNA (5'-R(*AP*UP*CP*CP*AP*GP*UP*GP*GP*AP*A)-3') Authors: Allain, F.H.-T, Clery, A, Moursy, A. Deposit date: 2021-11-26 Release date: 2022-12-21 Last modified: 2024-01-10 Method: SOLUTION NMR Cite: RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing. Nat Commun, 14, 2023
7QZP	Identification and characterization of an RRM-containing, ELAV-like, RNA binding protein in Acinetobacter Baumannii Descriptor: Hypothetical RNA binding protein from Acinetobacter baumannii Authors: Ciani, C, Perez-Rafols, A, Bonomo, I, Micaelli, M, Esposito, A, Zucal, C, Belli, R, D'Agostino, V.G, Bianconi, I, Calderone, V, Cerofolini, L, Fragai, M, Provenzani, A. Deposit date: 2022-01-31 Release date: 2022-07-13 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Identification and Characterization of an RRM-Containing, RNA Binding Protein in Acinetobacter baumannii . Biomolecules, 12, 2022
5X3Y	Refined solution structure of musashi1 RBD2 Descriptor: RNA-binding protein Musashi homolog 1 Authors: Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M. Deposit date: 2017-02-09 Release date: 2017-12-13 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA Molecules, 22, 2017
2YWK	Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 Descriptor: Putative RNA-binding protein 11 Authors: Kawazoe, M, Takemoto, C, Kaminishi, T, Uchikubo-Kamo, T, Nishino, A, Morita, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-20 Release date: 2008-04-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 To be Published
2YTC	Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 Descriptor: Pre-mRNA-splicing factor RBM22 Authors: Kasahara, N, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RNA binding domain in Pre-mRNA-splicing factor RBM22 To be Published

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