Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XM2
DownloadVisualize
BU of 4xm2 by Molmil
N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the absence of cadmium
Descriptor: Uncharacterized protein, ZINC ION
Authors:Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
Deposit date:2015-01-14
Release date:2015-06-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
5I4Y
DownloadVisualize
BU of 5i4y by Molmil
Exploring onset of lysozyme denaturation by urea: soak period 10 hours.
Descriptor: CHLORIDE ION, Lysozyme C, UREA
Authors:Hosur, M.V, Raskar, T, Khavnekar, S.
Deposit date:2016-02-13
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.607 Å)
Cite:Time-dependent X-ray diffraction studies on urea/hen egg white lysozyme complexes reveal structural changes that indicate onset of denaturation
Sci Rep, 6, 2016
4MB1
DownloadVisualize
BU of 4mb1 by Molmil
The Structure of MalL mutant enzyme G202P from Bacillus subtilus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Oligo-1,6-glucosidase 1
Authors:Hobbs, J.K, Jiao, W, Easter, A.D, Parker, E.J, Schipper, L.A, Arcus, V.L.
Deposit date:2013-08-19
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Change in heat capacity for enzyme catalysis determines temperature dependence of enzyme catalyzed rates.
Acs Chem.Biol., 8, 2013
3N7U
DownloadVisualize
BU of 3n7u by Molmil
NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana in complex with NAD and azide
Descriptor: AZIDE ION, Formate dehydrogenase, GLYCEROL, ...
Authors:Shabalin, I.G, Polyakov, K.M, Serov, A.E, Skirgello, O.E, Sadykhov, E.G, Dorovatovskiy, P.V, Tishkov, V.I, Popov, V.O.
Deposit date:2010-05-27
Release date:2010-06-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the apo and holo forms of NAD-dependent formate dehydrogenase from the higher-plant Arabidopsis Thaliana
To be Published
1T2C
DownloadVisualize
BU of 1t2c by Molmil
Plasmodium falciparum lactate dehydrogenase complexed with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GLYCEROL, L-lactate dehydrogenase
Authors:Cameron, A, Read, J, Tranter, R, Winter, V.J, Sessions, R.B, Brady, R.L, Vivas, L, Easton, A, Kendrick, H, Croft, S.L, Barros, D, Lavandera, J.L, Martin, J.J, Risco, F, Garcia-Ochoa, S, Gamo, F.J, Sanz, L, Leon, L, Ruiz, J.R, Gabarro, R, Mallo, A, De Las Heras, F.G.
Deposit date:2004-04-21
Release date:2004-05-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Identification and Activity of a Series of Azole-based Compounds with Lactate Dehydrogenase-directed Anti-malarial Activity.
J.Biol.Chem., 279, 2004
3N07
DownloadVisualize
BU of 3n07 by Molmil
Structure of putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Vibrio cholerae
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, MAGNESIUM ION
Authors:Liu, W, Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-13
Release date:2010-08-04
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural basis for the divergence of substrate specificity and biological function within HAD phosphatases in lipopolysaccharide and sialic acid biosynthesis.
Biochemistry, 52, 2013
7DD9
DownloadVisualize
BU of 7dd9 by Molmil
Cryo-EM structure of the Ams1 and Nbr1 complex
Descriptor: Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
Authors:Zhang, J, Ye, K.
Deposit date:2020-10-28
Release date:2021-07-14
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
4XD5
DownloadVisualize
BU of 4xd5 by Molmil
Phosphotriesterase variant R2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, Phosphotriesterase variant PTE-R2, ...
Authors:Campbell, E, Kaltenbach, M, Tokuriki, N, Jackson, C.J.
Deposit date:2014-12-19
Release date:2015-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The role of protein dynamics in the evolution of new enzyme function.
Nat.Chem.Biol., 12, 2016
1F4J
DownloadVisualize
BU of 1f4j by Molmil
STRUCTURE OF TETRAGONAL CRYSTALS OF HUMAN ERYTHROCYTE CATALASE
Descriptor: CATALASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Safo, M.K, Musayev, F.N, Wu, S.H, Abraham, D.J, Ko, T.P.
Deposit date:2000-06-07
Release date:2000-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of tetragonal crystals of human erythrocyte catalase.
Acta Crystallogr.,Sect.D, 57, 2001
4XN6
DownloadVisualize
BU of 4xn6 by Molmil
Crystal structure at room temperature of hen-egg lysozyme in complex with benzamidine
Descriptor: BENZAMIDINE, Lysozyme C
Authors:Gelin, M, Allemand, F, Labesse, G, Guichou, J.F.
Deposit date:2015-01-15
Release date:2015-08-12
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography.
Acta Crystallogr.,Sect.D, 71, 2015
4XNN
DownloadVisualize
BU of 4xnn by Molmil
Crystal Structure of a GH7 Family Cellobiohydrolase from Daphnia pulex
Descriptor: Cellobiohydrolase CHBI, GLYCEROL
Authors:Ebrahim, A, Hobdey, S.E, Podkaminer, K, Taylor II, L.E, Beckham, G.T, Decker, S.R, Himmel, M.E, Cragg, S.M, McGeehan, J.E.
Deposit date:2015-01-15
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of a GH7 Family Cellobiohydrolase from Daphnia pulex
To Be Published
1F4H
DownloadVisualize
BU of 1f4h by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC)
Descriptor: BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:2000-06-07
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
3NF4
DownloadVisualize
BU of 3nf4 by Molmil
Crystal structure of acyl-CoA dehydrogenase from Mycobacterium thermoresistibile bound to flavin adenine dinucleotide
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SODIUM ION, acyl-CoA dehydrogenase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-06-09
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
1F4A
DownloadVisualize
BU of 1f4a by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC)
Descriptor: BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:2000-06-07
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
4XFB
DownloadVisualize
BU of 4xfb by Molmil
cysteine dioxygenase variant - C93A at pH 8.0 unliganded
Descriptor: CHLORIDE ION, Cysteine dioxygenase type 1, FE (III) ION
Authors:Driggers, C.M, Karplus, P.A.
Deposit date:2014-12-26
Release date:2016-02-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
4LRT
DownloadVisualize
BU of 4lrt by Molmil
Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site
Descriptor: 4-hydroxy-2-oxovalerate aldolase, Acetaldehyde dehydrogenase, COENZYME A, ...
Authors:Fischer, B, Branlant, G, Talfournier, F, Gruez, A.
Deposit date:2013-07-20
Release date:2013-09-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal and solution structures of the bifunctional enzyme (Aldolase/Aldehyde dehydrogenase) from Thermomonospora curvata, reveal a cofactor-binding domain motion during NAD+ and CoA accommodation whithin the shared cofactor-binding site
To be Published
5IAT
DownloadVisualize
BU of 5iat by Molmil
Mechanistic and Structural Analysis of Substrate Recognition and Cofactor Binding by an Unusual Bacterial Prolyl Hydroxylase - apo-BaP4H
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Procollagen-Proline Dioxygenase
Authors:Schnicker, N.J, Dey, M.
Deposit date:2016-02-21
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Bacillus anthracis Prolyl 4-Hydroxylase Modifies Collagen-like Substrates in Asymmetric Patterns.
J.Biol.Chem., 291, 2016
4LS4
DownloadVisualize
BU of 4ls4 by Molmil
Crystal structure of L66S mutant toxin from Helicobacter pylori
Descriptor: BROMIDE ION, Uncharacterized protein, Toxin
Authors:Pathak, C.C, Im, H, Lee, B.J, Yoon, H.J.
Deposit date:2013-07-22
Release date:2014-02-05
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
4XIK
DownloadVisualize
BU of 4xik by Molmil
Crystal structure of NanB sialidase from streptococcus pneumoniae in complex with DMSO
Descriptor: DIMETHYL SULFOXIDE, Sialidase B
Authors:Brear, P.
Deposit date:2015-01-07
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:`The Hunt for Serendipitous Allosteric Sites: Discovery of a novel allosteric inhibitor of the bacterial sialidase NanB
To be published
1T90
DownloadVisualize
BU of 1t90 by Molmil
Crystal structure of methylmalonate semialdehyde dehydrogenase from Bacillus subtilis
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Probable methylmalonate-semialdehyde dehydrogenase
Authors:Dubourg, H, Didierjean, C, Stines-Chaumeil, C, Talfournier, F, Branlant, G, Aubry, A, Corbier, C.
Deposit date:2004-05-14
Release date:2006-01-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure analysis of Methylmalonate-Semialdehyde Dehydrogenase from Bacillus subtilis.
To be published
4LYC
DownloadVisualize
BU of 4lyc by Molmil
Cd ions within a lysoyzme single crystal
Descriptor: CADMIUM ION, Lysozyme C
Authors:Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y.
Deposit date:2013-07-30
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
1T0R
DownloadVisualize
BU of 1t0r by Molmil
Crystal Structure of the Toluene/o-xylene Monooxygenase Hydroxuylase from Pseudomonas stutzeri-azide bound
Descriptor: AZIDE ION, FE (III) ION, HYDROXIDE ION, ...
Authors:Sazinsky, M.H, Bard, J, Di Donato, A, Lippard, S.J.
Deposit date:2004-04-12
Release date:2004-07-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase from Pseudomonas stutzeri OX1: INSIGHT INTO THE SUBSTRATE SPECIFICITY, SUBSTRATE CHANNELING, AND ACTIVE SITE TUNING OF MULTICOMPONENT MONOOXYGENASES.
J.Biol.Chem., 279, 2004
1TAY
DownloadVisualize
BU of 1tay by Molmil
DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
Descriptor: HUMAN LYSOZYME
Authors:Harata, K, Muraki, M, Jigami, Y.
Deposit date:1992-08-06
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme.
Biochemistry, 31, 1992
4LYO
DownloadVisualize
BU of 4lyo by Molmil
CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN NEAT ACETONITRILE, THEN BACK-SOAKED IN WATER
Descriptor: LYSOZYME
Authors:Huang, Q, Wang, Z, Zhu, G, Qian, M, Shao, M, Jia, Y, Tang, Y.
Deposit date:1998-03-11
Release date:1998-05-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:X-ray studies on cross-linked lysozyme crystals in acetonitrile-water mixture.
Biochim.Biophys.Acta, 1384, 1998
7D88
DownloadVisualize
BU of 7d88 by Molmil
Crystal structure of a novel thermostable GH10 xylanase XynA
Descriptor: Beta-xylanase, CALCIUM ION
Authors:Xie, W, Yu, Q, Wang, C.
Deposit date:2020-10-07
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.34482026 Å)
Cite:Insights into the Catalytic Mechanism of a Novel XynA and Structure-Based Engineering for Improving Bifunctional Activities.
Biochemistry, 60, 2021

223790

건을2024-08-14부터공개중

PDB statisticsPDBj update infoContact PDBjnumon